BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0948900 Os01g0948900|AK100894
(337 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G41370.1 | chr2:17238019-17240203 REVERSE LENGTH=492 397 e-111
AT3G57130.1 | chr3:21147835-21150027 FORWARD LENGTH=468 382 e-106
AT4G19660.1 | chr4:10696266-10698243 REVERSE LENGTH=575 109 2e-24
AT5G45110.1 | chr5:18229319-18231334 FORWARD LENGTH=587 100 9e-22
AT1G64280.1 | chr1:23853329-23855407 REVERSE LENGTH=594 86 3e-17
AT4G26120.1 | chr4:13236448-13238487 FORWARD LENGTH=601 82 3e-16
AT5G66055.1 | chr5:26417425-26419234 REVERSE LENGTH=436 50 1e-06
AT5G40160.1 | chr5:16062726-16064301 REVERSE LENGTH=316 49 6e-06
>AT2G41370.1 | chr2:17238019-17240203 REVERSE LENGTH=492
Length = 491
Score = 397 bits (1019), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/310 (70%), Positives = 242/310 (78%), Gaps = 19/310 (6%)
Query: 7 VQKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVVA 66
QKQLA MVEKASIEDVMKVL+ASRKQD+HQLWTTCSHLVAKSGLPPE+LAKHLPIDVV
Sbjct: 161 TQKQLASMVEKASIEDVMKVLIASRKQDMHQLWTTCSHLVAKSGLPPEILAKHLPIDVVT 220
Query: 67 KIDELRLKS-MSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDHHKIRRMRRALDSSDVEL 125
KI+ELRLKS ++RRS +L+D KIRRMRRALDSSDVEL
Sbjct: 221 KIEELRLKSSIARRS---------LMPHNHHHDLSVAQDLEDQ-KIRRMRRALDSSDVEL 270
Query: 126 VKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMV 185
VKLMVMGEGLNLD++LALHYAVE+CSREVVKALLELGAADVN+PAGPAGKTPLH+AAEMV
Sbjct: 271 VKLMVMGEGLNLDESLALHYAVESCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMV 330
Query: 186 CPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRLCLELV 245
PDMVAVLLDHHADPNVRTV G+TPLDILRTLTSDFLFKGAVPGL HIEPNKLRLCLELV
Sbjct: 331 SPDMVAVLLDHHADPNVRTVGGITPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELV 390
Query: 246 QSAAMVMSREDAQTAAVNAAPIY-GESPXXXXXXXVYNASGTSSSMVNLSLDNRMVYLNL 304
QSAAMV+SRE+ + G P + SS N +LD+R+VYLNL
Sbjct: 391 QSAAMVISREEGNNSNNQNNDNNTGIYPHMNE-----EHNSGSSGGSNNNLDSRLVYLNL 445
Query: 305 GMDAQFGKMN 314
G A G+M
Sbjct: 446 G--AGTGQMG 453
>AT3G57130.1 | chr3:21147835-21150027 FORWARD LENGTH=468
Length = 467
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/303 (68%), Positives = 232/303 (76%), Gaps = 32/303 (10%)
Query: 7 VQKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVVA 66
QK L MVEKASIEDVMKVL+ASRKQD+HQLWTTCS+L+AKSGLP E+LAKHLPI++VA
Sbjct: 156 TQKHLTSMVEKASIEDVMKVLIASRKQDMHQLWTTCSYLIAKSGLPQEILAKHLPIELVA 215
Query: 67 KIDELRLKS-MSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDHHKIRRMRRALDSSDVEL 125
KI+ELRLKS M RS +L+D KIRRMRRALDSSDVEL
Sbjct: 216 KIEELRLKSSMPLRS-----------LMPHHHDLTSTLDLEDQ-KIRRMRRALDSSDVEL 263
Query: 126 VKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMV 185
VKLMVMGEGLNLD++LAL YAVENCSREVVKALLELGAADVN+PAGP GKT LH+AAEMV
Sbjct: 264 VKLMVMGEGLNLDESLALIYAVENCSREVVKALLELGAADVNYPAGPTGKTALHIAAEMV 323
Query: 186 CPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRLCLELV 245
PDMVAVLLDHHADPNV+TVDG+TPLDILRTLTSDFLFKGA+PGL HIEPNKLRLCLELV
Sbjct: 324 SPDMVAVLLDHHADPNVQTVDGITPLDILRTLTSDFLFKGAIPGLTHIEPNKLRLCLELV 383
Query: 246 QSAAMVMSREDAQTAAVNAAPIYGESPXXXXXXXVY---NASGTSSSMVNLSLDNRMVYL 302
QSAA+V+SRE+ G + +Y TS S SLD+R+VYL
Sbjct: 384 QSAALVISREE------------GNNNSNDNNTMIYPRMKDEHTSGS----SLDSRLVYL 427
Query: 303 NLG 305
NLG
Sbjct: 428 NLG 430
>AT4G19660.1 | chr4:10696266-10698243 REVERSE LENGTH=575
Length = 574
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 125/241 (51%), Gaps = 30/241 (12%)
Query: 8 QKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVVAK 67
Q++L VEK+ +E+V+ +L+ + DL QL C VA+S L + K LP++V+ K
Sbjct: 173 QRKLRNYVEKSLVENVLPILLVAFHCDLTQLLDQCIERVARSDLDRFCIEKELPLEVLEK 232
Query: 68 IDELRLKSMSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDH--HKIRRMRRALDSSDVEL 125
I +LR+KS++ E++D + ++ +ALDS DVEL
Sbjct: 233 IKQLRVKSVN------------------------IPEVEDKSIERTGKVLKALDSDDVEL 268
Query: 126 VKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMV 185
VKL++ + LD A LHYAV +VV +L+L ADVN G T LH+AA
Sbjct: 269 VKLLLTESDITLDQANGLHYAVAYSDPKVVTQVLDLDMADVNF-RNSRGYTVLHIAAMRR 327
Query: 186 CPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRLCLELV 245
P ++ L+ A+ + T DG + ++I R LT K + EP+K RLC++++
Sbjct: 328 EPTIIIPLIQKGANASDFTFDGRSAVNICRRLTRP---KDYHTKTSRKEPSKYRLCIDIL 384
Query: 246 Q 246
+
Sbjct: 385 E 385
>AT5G45110.1 | chr5:18229319-18231334 FORWARD LENGTH=587
Length = 586
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 120/243 (49%), Gaps = 29/243 (11%)
Query: 8 QKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVVAK 67
Q++L VEK +E+V+ +LM + L QL C VA+S L + K +P +V K
Sbjct: 178 QRRLCNFVEKTLVENVLPILMVAFNCKLTQLLDQCIERVARSDLYRFCIEKEVPPEVAEK 237
Query: 68 IDELRLKSMS--RRSPFLXXXXXXXXXXXXXXXXXXXXELDDHHKIRRMRRALDSSDVEL 125
I +LRL S SP + +I ++ +ALDS DVEL
Sbjct: 238 IKQLRLISPQDEETSPKISEKLL--------------------ERIGKILKALDSDDVEL 277
Query: 126 VKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMV 185
VKL++ + LD A LHY+V +VV +L L DVN+ G T LH AA
Sbjct: 278 VKLLLTESDITLDQANGLHYSVVYSDPKVVAEILALDMGDVNY-RNSRGYTVLHFAAMRR 336
Query: 186 CPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTS--DFLFKGAVPGLAHIEPNKLRLCLE 243
P ++ L+D A+ + T DG + ++ILR LT+ D+ K A E +K RLC++
Sbjct: 337 EPSIIISLIDKGANASEFTSDGRSAVNILRRLTNPKDYHTKTA----KGRESSKARLCID 392
Query: 244 LVQ 246
+++
Sbjct: 393 ILE 395
>AT1G64280.1 | chr1:23853329-23855407 REVERSE LENGTH=594
Length = 593
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 115/241 (47%), Gaps = 30/241 (12%)
Query: 8 QKQLAGMVEKASIEDVMKVLMASR--KQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVV 65
Q+ L +V+K IED + +L + + +L C ++ KS + L K LP ++V
Sbjct: 187 QRHLLDVVDKVVIEDTLVILKLANICGKACMKLLDRCKEIIVKSNVDMVSLEKSLPEELV 246
Query: 66 AKIDELRLKSMSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDHHKIRRMRRALDSSDVEL 125
+I + R K + P ++ H + + +ALDS D+EL
Sbjct: 247 KEIIDRR-KELGLEVP----------------------KVKKH--VSNVHKALDSDDIEL 281
Query: 126 VKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMV 185
VKL++ + NLDDA ALH+AV C+ + LL+L ADVNH P G T LHVAA
Sbjct: 282 VKLLLKEDHTNLDDACALHFAVAYCNVKTATDLLKLDLADVNH-RNPRGYTVLHVAAMRK 340
Query: 186 CPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRLCLELV 245
P ++ LL+ A + T++G T L I + T H K RLC+E++
Sbjct: 341 EPQLILSLLEKGASASEATLEGRTALMIAKQATMAVECNNIPEQCKH--SLKGRLCVEIL 398
Query: 246 Q 246
+
Sbjct: 399 E 399
>AT4G26120.1 | chr4:13236448-13238487 FORWARD LENGTH=601
Length = 600
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 28/213 (13%)
Query: 8 QKQLAGMVEKASIEDVMKVLMASR--KQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVV 65
++Q +V+K +ED++ + +L C ++ KS + L K LP +
Sbjct: 186 ERQFLEIVDKVVVEDILVIFKLDTLCGTTYKKLLDRCIEIIVKSDIELVSLEKSLPQHIF 245
Query: 66 AKIDELRLKSMSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDHHKIRRMRRALDSSDVEL 125
+I ++R +++ P +L+ H ++ + +ALDS DVEL
Sbjct: 246 KQIIDIR-EALCLEPP----------------------KLERH--VKNIYKALDSDDVEL 280
Query: 126 VKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMV 185
VK++++ NLD+A ALH+A+ +C+ + LLEL ADVN P G T LHVAA
Sbjct: 281 VKMLLLEGHTNLDEAYALHFAIAHCAVKTAYDLLELELADVN-LRNPRGYTVLHVAAMRK 339
Query: 186 CPDMVAVLLDHHADPNVRTVDGVTPLDILRTLT 218
P ++ LL A+ T+DG T L I++ LT
Sbjct: 340 EPKLIISLLMKGANILDTTLDGRTALVIVKRLT 372
>AT5G66055.1 | chr5:26417425-26419234 REVERSE LENGTH=436
Length = 435
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 137 LDD--ALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMVCPDMVAVLL 194
LDD A +HYAV+ S +K LL L AD+N G TPLHVA + D+V +LL
Sbjct: 322 LDDEGATLMHYAVQTASAPTIKLLL-LYNADIN-AQDRDGWTPLHVAVQARRSDIVKLLL 379
Query: 195 DHHADPNVRTVDGVTPL 211
AD V+ DG+TPL
Sbjct: 380 IKGADIEVKNKDGLTPL 396
>AT5G40160.1 | chr5:16062726-16064301 REVERSE LENGTH=316
Length = 315
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 138 DDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMVCPDMVAVLLDHH 197
D A +HYAV+ + + VK L + DVN A G TPLH+A + D+ +LL +
Sbjct: 217 DGAAPIHYAVQVGALQTVKLLFKYNV-DVN-VADNEGWTPLHIAVQSRNRDITKILLTNG 274
Query: 198 ADPNVRTVDGVTPLDILRTLTSDF 221
AD RT DG LD+ DF
Sbjct: 275 ADKTRRTKDGKLALDLALCFGRDF 298
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,039,678
Number of extensions: 209151
Number of successful extensions: 623
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 621
Number of HSP's successfully gapped: 8
Length of query: 337
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 238
Effective length of database: 8,392,385
Effective search space: 1997387630
Effective search space used: 1997387630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)