BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0927900 Os01g0927900|AK073189
(570 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0927900 Similar to Aspartate kinase precursor (EC 2.7.... 972 0.0
Os07g0300900 Similar to Lysine-sensitive aspartate kinase 818 0.0
Os03g0850400 Similar to Aspartate kinase precursor (EC 2.7.... 796 0.0
Os09g0294000 Similar to Bifunctional aspartokinase/homoseri... 181 2e-45
Os08g0342400 Similar to Bifunctional aspartokinase/homoseri... 152 6e-37
>Os01g0927900 Similar to Aspartate kinase precursor (EC 2.7.2.4)
Length = 570
Score = 972 bits (2514), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/475 (100%), Positives = 475/475 (100%)
Query: 96 DQLSVVMKFGGSSVSSAARMREVAGLILAFPEERPVVVLSAMGKTTNLLLLAGEKAVGCG 155
DQLSVVMKFGGSSVSSAARMREVAGLILAFPEERPVVVLSAMGKTTNLLLLAGEKAVGCG
Sbjct: 96 DQLSVVMKFGGSSVSSAARMREVAGLILAFPEERPVVVLSAMGKTTNLLLLAGEKAVGCG 155
Query: 156 VIRVSEIEEWNLIKDLHIKTVEELALPRSVIHTMLDELEQLLKGIAMMKELTLRTTDYLV 215
VIRVSEIEEWNLIKDLHIKTVEELALPRSVIHTMLDELEQLLKGIAMMKELTLRTTDYLV
Sbjct: 156 VIRVSEIEEWNLIKDLHIKTVEELALPRSVIHTMLDELEQLLKGIAMMKELTLRTTDYLV 215
Query: 216 SFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFGNADILEATYPAVAKRLHGDWI 275
SFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFGNADILEATYPAVAKRLHGDWI
Sbjct: 216 SFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFGNADILEATYPAVAKRLHGDWI 275
Query: 276 RDPAIPIVTGFLGKGWKSGAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPN 335
RDPAIPIVTGFLGKGWKSGAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPN
Sbjct: 276 RDPAIPIVTGFLGKGWKSGAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPN 335
Query: 336 IYPNATTVPYLTFEEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLITKQ 395
IYPNATTVPYLTFEEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLITKQ
Sbjct: 336 IYPNATTVPYLTFEEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLITKQ 395
Query: 396 REMDKVVLTSIVLKSNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDCVATSEVSISV 455
REMDKVVLTSIVLKSNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDCVATSEVSISV
Sbjct: 396 REMDKVVLTSIVLKSNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDCVATSEVSISV 455
Query: 456 SLDPSKIWSRELIQQELDHVVEELEKIAVVHLLQQRAIISLIGNVRRSSLILEKAFQVLR 515
SLDPSKIWSRELIQQELDHVVEELEKIAVVHLLQQRAIISLIGNVRRSSLILEKAFQVLR
Sbjct: 456 SLDPSKIWSRELIQQELDHVVEELEKIAVVHLLQQRAIISLIGNVRRSSLILEKAFQVLR 515
Query: 516 KSGVNVQMISQGASKVNMSLIVHDSEAKQCIKALHQAFFEDDVLTEVEEEALHMS 570
KSGVNVQMISQGASKVNMSLIVHDSEAKQCIKALHQAFFEDDVLTEVEEEALHMS
Sbjct: 516 KSGVNVQMISQGASKVNMSLIVHDSEAKQCIKALHQAFFEDDVLTEVEEEALHMS 570
>Os07g0300900 Similar to Lysine-sensitive aspartate kinase
Length = 575
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/470 (83%), Positives = 432/470 (91%), Gaps = 2/470 (0%)
Query: 97 QLSVVMKFGGSSVSSAARMREVAGLILAFPEERPVVVLSAMGKTTNLLLLAGEKAVGCGV 156
+L+VVMKFGGSSV+SA RMREVA LIL+FPEERPV+VLSAMGKTTN LL+AGEKAVGCG
Sbjct: 89 ELTVVMKFGGSSVASAERMREVADLILSFPEERPVIVLSAMGKTTNKLLMAGEKAVGCGA 148
Query: 157 IRVSEIEEWNLIKDLHIKTVEELALPRSVIHTMLDELEQLLKGIAMMKELTLRTTDYLVS 216
VSE++E IK+LH T+++L L RS++ + DELEQLLKGIAMMKELTLRT DYLVS
Sbjct: 149 TNVSELDELTFIKELHFGTIDQLGLDRSIVSGLSDELEQLLKGIAMMKELTLRTRDYLVS 208
Query: 217 FGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFGNADILEATYPAVAKRLHGDWIR 276
FGECMSTRIFAA LNK+GVKARQYDAF+IGFITTDDF NADILEATYPA+AKRLHGDW+
Sbjct: 209 FGECMSTRIFAALLNKLGVKARQYDAFEIGFITTDDFTNADILEATYPAIAKRLHGDWVT 268
Query: 277 DPAIPIVTGFLGKGWKSGAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNI 336
PAIPIVTGFLGKGWK+GA+TTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNI
Sbjct: 269 GPAIPIVTGFLGKGWKTGAITTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNI 328
Query: 337 YPNATTVPYLTFEEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLITKQR 396
+PNA VPYLTF+EAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYN +APGTLITK R
Sbjct: 329 HPNAKPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNRRAPGTLITKAR 388
Query: 397 EMDKVVLTSIVLKSNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDCVATSEVSISVS 456
+M K VLTSIVLKSN+TMLDIVSTRMLGQ+GFLAKVFSIFEDLGISVDCVATSEVSIS++
Sbjct: 389 DMSKTVLTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLT 448
Query: 457 LDPSKIWSRELIQQ--ELDHVVEELEKIAVVHLLQQRAIISLIGNVRRSSLILEKAFQVL 514
LDPSK+WSRELI+Q ELDHV+EELEKIAVVHLLQ R+IISLIGNV+RSSLILEKAF VL
Sbjct: 449 LDPSKLWSRELIKQANELDHVIEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVL 508
Query: 515 RKSGVNVQMISQGASKVNMSLIVHDSEAKQCIKALHQAFFEDDVLTEVEE 564
R +GVNVQMISQGASKVN+SL+VHDSEAKQC++ALH AFFE L EV +
Sbjct: 509 RTNGVNVQMISQGASKVNISLVVHDSEAKQCVQALHSAFFESGFLPEVND 558
>Os03g0850400 Similar to Aspartate kinase precursor (EC 2.7.2.4)
Length = 482
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/467 (84%), Positives = 429/467 (91%)
Query: 102 MKFGGSSVSSAARMREVAGLILAFPEERPVVVLSAMGKTTNLLLLAGEKAVGCGVIRVSE 161
MKFGGSSV+SA RMREVA LIL+FPEE PVVVLSAMGKTTN LLLAGEKAV CG + SE
Sbjct: 1 MKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASE 60
Query: 162 IEEWNLIKDLHIKTVEELALPRSVIHTMLDELEQLLKGIAMMKELTLRTTDYLVSFGECM 221
I E +IK+LH++T++EL L RS++ +L+ELEQLLKG+AMMKELT RT DYLVSFGECM
Sbjct: 61 IPELAVIKELHVRTIDELGLDRSIVSGLLEELEQLLKGVAMMKELTPRTRDYLVSFGECM 120
Query: 222 STRIFAAYLNKIGVKARQYDAFDIGFITTDDFGNADILEATYPAVAKRLHGDWIRDPAIP 281
STRIFAAYLNK+G KARQYDAFDIGFITTDDF NADILEATYPAVAKRL GDWI DPAIP
Sbjct: 121 STRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIP 180
Query: 282 IVTGFLGKGWKSGAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIYPNAT 341
IVTGFLGKGWKS AVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNI NA
Sbjct: 181 IVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAI 240
Query: 342 TVPYLTFEEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLITKQREMDKV 401
VPYLTFEEAAELAYFGAQVLHPQSMRPA+EGDIPVRVKNSYN +APGT+ITK R++ K
Sbjct: 241 PVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDLSKS 300
Query: 402 VLTSIVLKSNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDCVATSEVSISVSLDPSK 461
+LTSIVLKSN+TMLDIVSTRMLGQ+GFLAKVFSIFEDLGISVDCVATSEVSIS++LDPSK
Sbjct: 301 ILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK 360
Query: 462 IWSRELIQQELDHVVEELEKIAVVHLLQQRAIISLIGNVRRSSLILEKAFQVLRKSGVNV 521
+W RELIQQELDHVVEELEKIAVVHLLQ R+IISLIGNV+RSSLILEKAF VLR++GVNV
Sbjct: 361 LWCRELIQQELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGVNV 420
Query: 522 QMISQGASKVNMSLIVHDSEAKQCIKALHQAFFEDDVLTEVEEEALH 568
QMISQGASKVN+SL+VHDSEAKQCI+ALH AFFE+ L+EVEEE L
Sbjct: 421 QMISQGASKVNISLVVHDSEAKQCIQALHSAFFENGFLSEVEEEDLQ 467
>Os09g0294000 Similar to Bifunctional aspartokinase/homoserine dehydrogenase 2,
chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes:
Aspartokinase (EC 2.7.2.4)
Length = 915
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 245/470 (52%), Gaps = 25/470 (5%)
Query: 101 VMKFGGSSVSSAARMREVAGLILAFPEERPVVVLSAMGKTTNLLLLAGEKAVGCGVIRVS 160
V KFGG+ + + R++ VA ++L ER ++++SAM K T+++ KA V+
Sbjct: 91 VHKFGGTCMGTPQRIQNVADIVLGDSSERKLIIVSAMSKVTDMMFNLVHKAQSRDNSYVT 150
Query: 161 EIEEWNLIKDLHIKTV------EELALPRSVIHTMLDELEQLLKGIAMMKELTLRTTDYL 214
++E + + H+ E+LA + +H+ + L +L+ I + T +D++
Sbjct: 151 ALDE---VFNKHMAAAKELLDGEDLARFLAQLHSDISNLRAMLRAIFIAGHATESFSDFV 207
Query: 215 VSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFGNADILEATYPAVAKRLHGDW 274
V GE S ++ + + K GV D ++ + ++ ++ Y KRL +
Sbjct: 208 VGHGELWSAQMLSYAIKKSGVPCSWMDTREVLVVKP---SGSNQVDPDYLESEKRLQKWF 264
Query: 275 IRDPA-IPIVTGFLGKGWKSGAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCD 333
R PA I I TGF+ ++ TTL R GSD +A+ IG + ++ +W DVDGV + D
Sbjct: 265 SRQPAEIIIATGFIASTAEN-IPTTLKRDGSDFSASIIGSLVRACQVTIWTDVDGVFSAD 323
Query: 334 PNIYPNATTVPYLTFEEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLIT 393
P A + L+++EA E++YFGA VLHP+++ P + +IP+ ++N +N APGT I
Sbjct: 324 PRKVSEAVILSTLSYQEAWEMSYFGANVLHPRTIIPVMKDNIPIVIRNMFNLSAPGTTIC 383
Query: 394 KQREMDKVVLTSIVLKSNVT-----MLDIVSTRMLGQFGFLAKVFSIFEDLGISVDCV-- 446
KQ + L + V KS T ++++ T M G G + +FS +D+G +V +
Sbjct: 384 KQPANENADLDACV-KSFATIDKLALVNVEGTGMAGVPGTASAIFSAAKDVGANVIMISQ 442
Query: 447 ATSEVSISVSLDPSKIWSRELIQQELDHVVEELEKIAVVHLLQQRAIISLIGNVRRSSLI 506
A+SE S+ ++ ++ + +++ V +++ +I++ +G +R +S
Sbjct: 443 ASSEHSVCFAVPEKEVAAVSTALHVRFREALAAGRLSKVEVIRGCSILAAVG-LRMASTP 501
Query: 507 LEKA--FQVLRKSGVNVQMISQGASKVNMSLIVHDSEAKQCIKALHQAFF 554
A F L K+ +NV+ I+QG S+ N+++++ + + ++A+H FF
Sbjct: 502 GVSAILFDALAKANINVRAIAQGCSEYNITVVLKQEDCVRALRAVHSRFF 551
>Os08g0342400 Similar to Bifunctional aspartokinase/homoserine dehydrogenase 1,
chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes:
Aspartokinase (EC 2.7.2.4)
Length = 763
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 195/394 (49%), Gaps = 28/394 (7%)
Query: 177 EELALPRSVIHTMLDELEQLLKGIAMMKELTLRTTDYLVSFGECMSTRIFAAYLNKIGVK 236
E+LA S +H + L+ +L+ I + T +D++V GE S ++ + + K G
Sbjct: 18 EDLARFLSQLHADVSNLKAMLRAICIAGHATESFSDFVVGHGEIWSAQLLSFAIKKSGTP 77
Query: 237 ARQYDAFDIGFITTDDFGNADILEATYPAVAKRLHGDWIRDPAIPIV-TGFLGKGWKSGA 295
D ++ + ++ ++ Y KRL + R PA I+ TGF+
Sbjct: 78 CSWMDTREVLVVNPT---GSNQVDPDYLESEKRLEKWFARQPAETIIATGFIAST-PENI 133
Query: 296 VTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIYPNATTVPYLTFEEAAELA 355
TTL R GSD +A IG + ++ +W DVDGV + DP A + L+++EA E++
Sbjct: 134 PTTLKRDGSDFSAAIIGSLVKAGQVTIWTDVDGVFSADPRKVSEAVILSTLSYQEAWEMS 193
Query: 356 YFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLITKQREMDKVVLTSIVLK----SN 411
YFGA VLHP+++ P + +IP+ ++N +N APGT+I +Q + L + V
Sbjct: 194 YFGANVLHPRTIIPVMKYNIPIVIRNMFNISAPGTMICQQPANESGDLEACVKAFATIDK 253
Query: 412 VTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDCV--ATSEVSISVSLDPSKIWS----- 464
++++++ T M G G + +F +D+G +V + A+SE S+ ++ ++ +
Sbjct: 254 LSLVNVEGTGMAGVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVAAVSAAL 313
Query: 465 ----RELIQQELDHVVEELEKIAVVHLLQQRAIISLIGNVRRSSLILEKAFQVLRKSGVN 520
RE + L K+ V+H A + L + + + F L K+ +N
Sbjct: 314 HVRFREALS------AGRLSKVEVIHNCSILAAVGL--KMASTPGVSATLFDALAKANIN 365
Query: 521 VQMISQGASKVNMSLIVHDSEAKQCIKALHQAFF 554
V+ I+QG S+ N+++++ + + ++A H FF
Sbjct: 366 VRAIAQGCSEYNITVVLKQEDCVRALRAAHSRFF 399
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,404,966
Number of extensions: 568891
Number of successful extensions: 1455
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1447
Number of HSP's successfully gapped: 5
Length of query: 570
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 464
Effective length of database: 11,501,117
Effective search space: 5336518288
Effective search space used: 5336518288
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)