BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0821600 Os01g0821600|AK108657
(280 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0821600 WRKY transcription factor 48-like protein (WRK... 460 e-130
Os05g0478800 82 5e-16
Os05g0478400 81 9e-16
Os09g0334500 WRKY transcription factor 74 77 2e-14
Os08g0386200 WRKY transcription factor 69 74 1e-13
Os06g0158100 Similar to WRKY transcription factor 63 68 8e-12
Os01g0656400 Similar to WRKY transcription factor 15 67 2e-11
>Os01g0821600 WRKY transcription factor 48-like protein (WRKY transcription
factor 21)
Length = 280
Score = 460 bits (1183), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/280 (82%), Positives = 230/280 (82%)
Query: 1 MAMLGSSSAVVLELMTMGYQSAAYLGELLRAASPAQAGDEQQELAAEILRCCDRVIAKLN 60
MAMLGSSSAVVLELMTMGYQSAAYLGELLRAASPAQAGDEQQELAAEILRCCDRVIAKLN
Sbjct: 1 MAMLGSSSAVVLELMTMGYQSAAYLGELLRAASPAQAGDEQQELAAEILRCCDRVIAKLN 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXVTSPSLPVTPTKXXXXXXXXXXXXXSGTTTDGFIWRK 120
VTSPSLPVTPTK SGTTTDGFIWRK
Sbjct: 61 RGGATGATTGKKRKAAESAAAAAVTSPSLPVTPTKRRARGAEAVREVRSGTTTDGFIWRK 120
Query: 121 YGQKEINGCKHPRLYYRCAFRGQGCLATRRVXXXXXXXXPAAAFVIAYYGEHTCGGDXXX 180
YGQKEINGCKHPRLYYRCAFRGQGCLATRRV PAAAFVIAYYGEHTCGGD
Sbjct: 121 YGQKEINGCKHPRLYYRCAFRGQGCLATRRVQQSQSQDDPAAAFVIAYYGEHTCGGDAAA 180
Query: 181 XXXCRDGELMPPAVINSGASSFAAAWNMASREPASSLAVERRSCDGDAPSETSQGWSPSF 240
CRDGELMPPAVINSGASSFAAAWNMASREPASSLAVERRSCDGDAPSETSQGWSPSF
Sbjct: 181 AAACRDGELMPPAVINSGASSFAAAWNMASREPASSLAVERRSCDGDAPSETSQGWSPSF 240
Query: 241 SSEVELDVVGFDLAGADSSASPVWEFLNGSFDWEFVINSL 280
SSEVELDVVGFDLAGADSSASPVWEFLNGSFDWEFVINSL
Sbjct: 241 SSEVELDVVGFDLAGADSSASPVWEFLNGSFDWEFVINSL 280
>Os05g0478800
Length = 328
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 89/216 (41%), Gaps = 19/216 (8%)
Query: 2 AMLGSSSAVVLELMTMGYQSAAYLGELLRAASPAQAGDEQQELAAEILRCCDRVIAKLNX 61
A+ G +A +L+ G +SAA L LL +S LA +IL C DR +AKL+
Sbjct: 10 AIAGKPTAASAQLVAEGRESAARLYALLVGSSALHG---PVGLAEQILLCFDRALAKLHG 66
Query: 62 XXXXXXXXXXXXXXXXXXXXXX--------VTSPSLPVTPTKXXXXXXXXXXXXXSGTTT 113
S + + T
Sbjct: 67 VNLAGAEDDDDAAGNGNGRKRKPGRGRGLTAASAAASSKRMRVSNAGGNGARIERKATMD 126
Query: 114 DGFIWRKYGQKEINGCKHPRLYYRCAFR-GQGCLATRRVXXXXXXXXPAAA--FVIAYYG 170
D F+WRKYGQKEI KHPR YYRC+++ GC AT++V A+ ++I Y+G
Sbjct: 127 DKFLWRKYGQKEIKNSKHPRFYYRCSYKDDHGCTATKQVQQSETADDDTASPVYIITYFG 186
Query: 171 EHTC-GGDXXXXXXCRDGE----LMPPAVINSGASS 201
EHTC GD GE L P ++ S ASS
Sbjct: 187 EHTCRHGDDAAAMVVDGGEEEDQLSPAQMVISFASS 222
>Os05g0478400
Length = 358
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Query: 111 TTTDGFIWRKYGQKEINGCKHPRLYYRCAFR-GQGCLATRRVXXXXXXXXPAAAFVIAYY 169
T+ DGF+WRKYGQKEI KHPRLYYRC+++ GC AT++V + +VI Y+
Sbjct: 152 TSEDGFLWRKYGQKEIKNSKHPRLYYRCSYKDDHGCTATKQVQQSEED---PSLYVITYF 208
Query: 170 GEHTC 174
G+HTC
Sbjct: 209 GDHTC 213
>Os09g0334500 WRKY transcription factor 74
Length = 361
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 114 DGFIWRKYGQKEINGCKHPRLYYRCAFR-GQGCLATRRVXXXXXXXXPAAAFVIAYYGEH 172
DG WRKYGQKEI G KHPR YYRC R QGC+AT++V A F + Y+GEH
Sbjct: 127 DGHSWRKYGQKEILGAKHPRGYYRCTHRHSQGCMATKQVQRTDED---ATVFDVIYHGEH 183
Query: 173 TC 174
TC
Sbjct: 184 TC 185
>Os08g0386200 WRKY transcription factor 69
Length = 319
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 110 GTTTDGFIWRKYGQKEINGCKHPRLYYRCAFRG-QGCLATRRVXXXXXXXXPAAAFVIAY 168
G DG WRKYGQK+I G KHPR YYRC R QGC AT++V A+ F + Y
Sbjct: 127 GPADDGHSWRKYGQKDILGAKHPRGYYRCTHRNTQGCTATKQVQRTDDD---ASLFDVVY 183
Query: 169 YGEHTC 174
+GEHTC
Sbjct: 184 HGEHTC 189
>Os06g0158100 Similar to WRKY transcription factor 63
Length = 391
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 111 TTTDGFIWRKYGQKEINGCKHPRLYYRCAFRG-QGCLATRRVXXXXXXXXPAAAFVIAYY 169
T DGF WRKYGQK+I G K PR YYRC +R QGC AT++V A F + Y
Sbjct: 142 TPDDGFSWRKYGQKDILGAKFPRGYYRCTYRNAQGCPATKQVQRSDADL---AVFDVTYQ 198
Query: 170 GEHTC 174
G HTC
Sbjct: 199 GAHTC 203
>Os01g0656400 Similar to WRKY transcription factor 15
Length = 274
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 110 GTTTDGFIWRKYGQKEINGCKHPRLYYRCAFRG-QGCLATRRVXXXXXXXXPAAAFVIAY 168
G DGF WRKYGQK+I G K+PR Y+RC R QGC A+++V F + Y
Sbjct: 98 GPLDDGFSWRKYGQKDILGAKYPRAYFRCTHRHTQGCHASKQVQRADGDPL---LFDVVY 154
Query: 169 YGEHTC 174
+G+HTC
Sbjct: 155 HGDHTC 160
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.131 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,571,275
Number of extensions: 321100
Number of successful extensions: 957
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 972
Number of HSP's successfully gapped: 7
Length of query: 280
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 180
Effective length of database: 11,814,401
Effective search space: 2126592180
Effective search space used: 2126592180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 155 (64.3 bits)