Os01g0656400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to WRKY transcription factor 15.
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Os01g0656400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to WRKY transcription factor 15.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.97 | 0.55 | 7.92 | 1.03 | 0.0338 | 0.616 | 1.46 | 7.08 | 0.138 | 1.79 | 4.7 | 2399 | -- | -- |
| 155.37 | 0.585 | 7.8 | 1.02 | 0.0968 | 0.182 | 1.92 | -- | 0.255 | 1.37 | 4.7 | 2399 | -- | -- |
| 144.69 | 0.56 | 7.94 | 1.01 | 0.0341 | 0.669 | -- | 8.13 | 0.113 | 0.549 | 4.6 | 2399 | -- | -- |
| 169.67 | 0.611 | 7.8 | 0.98 | 0.166 | 0.296 | -- | -- | 0.245 | 3.52 | 4.7 | 2399 | -- | -- |
| 144.75 | 0.56 | 7.94 | 1.02 | -- | 0.709 | -- | 8.17 | 0.117 | -- | 4.6 | 2399 | -- | -- |
| 156.85 | 0.587 | 7.8 | 0.97 | 0.0337 | -- | 2.02 | -- | 0.253 | 1.43 | -- | -- | -- | -- |
| 173.37 | 0.617 | 7.8 | 0.902 | 0.035 | -- | -- | -- | 0.241 | 2.6 | -- | -- | -- | -- |
| 168.67 | 0.605 | 7.85 | 0.237 | -- | -0.659 | -- | -- | 0.0321 | -- | 8.1 | 47520 | -- | -- |
| 174.18 | 0.615 | 7.78 | -- | 0.0678 | -0.881 | -- | -- | 0.333 | 2.6 | 7.5 | 6682 | -- | -- |
| 173.44 | 0.615 | 7.8 | 0.903 | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
| 194.81 | 0.653 | 7.83 | -- | 0.0527 | -- | -- | -- | 0.141 | 2.82 | -- | -- | -- | -- |
| 169.1 | 0.606 | 7.87 | -- | -- | -0.822 | -- | -- | -0.0316 | -- | 7.983 | 47520 | -- | -- |
| 194.97 | 0.652 | 7.83 | -- | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.10 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 2 | 136.64 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 4 | 136.83 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 5 | 136.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 7 | 136.98 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 8 | 136.99 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 10 |
| 10 | 137.12 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 15 | 137.16 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 17 | 137.16 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 20 | 137.26 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 28 | 137.45 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 30 | 137.51 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 31 | 137.57 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 46 | 137.76 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 11 |
| 52 | 137.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 57 | 138.01 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 60 | 138.03 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 73 | 138.29 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 113 | 138.64 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 115 | 138.66 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 116 | 138.66 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 124 | 138.71 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 135 | 138.81 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 137 | 138.81 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 19 |
| 138 | 138.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 139 | 138.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 143 | 138.88 | wind | 9.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 152 | 138.99 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 155 | 139.08 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 201 | 139.62 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 207 | 139.68 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 223 | 139.77 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 233 | 139.86 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 246 | 139.96 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 17 |
| 247 | 139.97 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 259 | 140.03 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 282 | 140.17 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 8 |
| 289 | 140.24 | wind | 9.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 299 | 140.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 300 | 140.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 3 |
| 309 | 140.35 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 313 | 140.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 316 | 140.39 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 327 | 140.44 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 330 | 140.46 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 340 | 140.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 347 | 140.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 350 | 140.54 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 19 |
| 355 | 140.57 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 14 | 19 |
| 367 | 140.64 | wind | 9.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 368 | 140.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 376 | 140.66 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 379 | 140.68 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 381 | 140.68 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 383 | 140.68 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 396 | 140.74 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 397 | 140.74 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 409 | 140.75 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 418 | 140.79 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 426 | 140.80 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 427 | 140.80 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 13 |
| 429 | 140.81 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 430 | 140.82 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 447 | 140.89 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 449 | 140.89 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 11 |
| 471 | 140.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 13 |
| 482 | 141.00 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 488 | 141.01 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 19 |
| 496 | 141.04 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 497 | 141.04 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 11 |
| 517 | 141.07 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 525 | 141.09 | wind | 5.0 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 533 | 141.11 | radiation | 1.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 538 | 141.11 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 17 |
| 539 | 141.11 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 20 |
| 545 | 141.12 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 15 |
| 562 | 141.16 | radiation | 1.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 608 | 141.21 | wind | 5.0 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 632 | 141.26 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 635 | 141.26 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 641 | 141.27 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 655 | 141.29 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 676 | 141.34 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 677 | 141.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 691 | 141.37 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 699 | 141.40 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 738 | 141.44 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 810 | 141.52 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 816 | 141.53 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 831 | 141.56 | temperature | 25.0 | 90 | < th | dose independent | rect. | 9 | 7 |
| 845 | 141.58 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 851 | 141.59 | wind | 5.0 | 1440 | < th | dose independent | rect. | 1 | 19 |
| 874 | 141.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 875 | 141.63 | wind | 5.0 | 1440 | > th | dose independent | rect. | 1 | 19 |
| 876 | 141.63 | wind | 5.0 | 1440 | < th | dose independent | rect. | 1 | 21 |
| 880 | 141.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 12 |
| 881 | 141.64 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 893 | 141.66 | wind | 5.0 | 1440 | > th | dose independent | rect. | 1 | 22 |
| 896 | 141.67 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 900 | 141.67 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 912 | 141.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 12 |
| 916 | 141.67 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 923 | 141.68 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 930 | 141.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 933 | 141.69 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 935 | 141.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 16 |
| 940 | 141.70 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 20 |
| 942 | 141.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 943 | 141.70 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 963 | 141.73 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 20 |
| 964 | 141.73 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 20 |
| 988 | 141.77 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 990 | 141.78 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 1 |