BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0818000 Os01g0818000|AK070194
(432 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0818000 Auxin Efflux Carrier family protein 840 0.0
Os05g0481900 Auxin Efflux Carrier family protein 607 e-174
Os08g0191000 Auxin Efflux Carrier family protein 292 4e-79
Os09g0554300 Auxin Efflux Carrier family protein 181 1e-45
Os09g0555100 Auxin Efflux Carrier family protein 168 8e-42
Os09g0491740 Auxin Efflux Carrier family protein 151 8e-37
>Os01g0818000 Auxin Efflux Carrier family protein
Length = 432
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/432 (97%), Positives = 421/432 (97%)
Query: 1 MMERSLMEALATAAQGGTVGTSVFDMLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGR 60
MMERSLMEALATAAQGGTVGTSVFDMLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGR
Sbjct: 1 MMERSLMEALATAAQGGTVGTSVFDMLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGR 60
Query: 61 KLLNGLVFSLLLPCLIFSQLGRAITIEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIRPP 120
KLLNGLVFSLLLPCLIFSQLGRAITIEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIRPP
Sbjct: 61 KLLNGLVFSLLLPCLIFSQLGRAITIEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIRPP 120
Query: 121 YPYFKFTVXXXXXXXXXXXPLVLIAALCRDPTNPFGDSDKCNEDGNAYISFGQWVGAIIV 180
YPYFKFTV PLVLIAALCRDPTNPFGDSDKCNEDGNAYISFGQWVGAIIV
Sbjct: 121 YPYFKFTVIHIGIGNIGNIPLVLIAALCRDPTNPFGDSDKCNEDGNAYISFGQWVGAIIV 180
Query: 181 YTYVFKMLAPPPGESFDSAEEDILPIKASGDNVVPEKGKYPTSTRTSTVPENEPLLSSEG 240
YTYVFKMLAPPPGESFDSAEEDILPIKASGDNVVPEKGKYPTSTRTSTVPENEPLLSSEG
Sbjct: 181 YTYVFKMLAPPPGESFDSAEEDILPIKASGDNVVPEKGKYPTSTRTSTVPENEPLLSSEG 240
Query: 241 DKNVSTSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLTDDAPLF 300
DKNVSTSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLTDDAPLF
Sbjct: 241 DKNVSTSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLTDDAPLF 300
Query: 301 FFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILVPLAGVGII 360
FFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILVPLAGVGII
Sbjct: 301 FFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILVPLAGVGII 360
Query: 361 VLVDKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILFWVHIFAVFSM 420
VLVDKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILFWVHIFAVFSM
Sbjct: 361 VLVDKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILFWVHIFAVFSM 420
Query: 421 AGWIILYLSLLF 432
AGWIILYLSLLF
Sbjct: 421 AGWIILYLSLLF 432
>Os05g0481900 Auxin Efflux Carrier family protein
Length = 437
Score = 607 bits (1565), Expect = e-174, Method: Compositional matrix adjust.
Identities = 315/440 (71%), Positives = 358/440 (81%), Gaps = 11/440 (2%)
Query: 1 MMERSLMEALATAAQGGTVG--TSVFDMLKYAVLPIAKVFTVCFMGFLMASKYVNILQPN 58
MM RS++E + AAQGG SV M +YAVLPIAKVF VCFMGFLMASK V +L+P+
Sbjct: 1 MMGRSVLEMVVAAAQGGGGAAGESVLGMFRYAVLPIAKVFVVCFMGFLMASKRVGVLKPS 60
Query: 59 GRKLLNGLVFSLLLPCLIFSQLGRAITIEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIR 118
GRKLLN LVFSLLLPCLIF+QLGR+ITI+K+++WW+IP NI +GAVS SL+G +VA I+R
Sbjct: 61 GRKLLNALVFSLLLPCLIFAQLGRSITIDKIMEWWFIPANIALGAVSASLVGLIVALIVR 120
Query: 119 PPYPYFKFTVXXXXXXXXXXXPLVLIAALCRDPTNPFGDSDKCNEDGNAYISFGQWVGAI 178
PPYPYFKFT+ PLVLI+ALCRD NPFGDS+KC +DGNAY+SFGQWVGAI
Sbjct: 121 PPYPYFKFTITHIGIGNIGNIPLVLISALCRDQLNPFGDSNKCTQDGNAYLSFGQWVGAI 180
Query: 179 IVYTYVFKMLAPPPGESFDSAEE--DILPIKASGDNVVPEKGKYPTSTRTST----VPEN 232
IVYTYVFKMLAPPPG++FDS +E D LPIKA N + KYP+S +T +
Sbjct: 181 IVYTYVFKMLAPPPGQTFDSCDEERDKLPIKAP--NTMSSVAKYPSSAHGNTHEEEPLLS 238
Query: 233 EPLLSSEGDKNVSTSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFV 292
E ++V SLGSKIM ++ MV+FL+ KQLLQPPIIASV AI +GVVP LKN +
Sbjct: 239 IEEEEEEEGQDVH-SLGSKIMIPIKGMVRFLQKKQLLQPPIIASVLAITLGVVPFLKNLI 297
Query: 293 LTDDAPLFFFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILV 352
LTDDAPLFF TDSCLILGEAMIPCILLAVGGNLVDGPGEGS RLGVRTTVAIIFARLILV
Sbjct: 298 LTDDAPLFFLTDSCLILGEAMIPCILLAVGGNLVDGPGEGSRRLGVRTTVAIIFARLILV 357
Query: 353 PLAGVGIIVLVDKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILFWV 412
P+AG+GI+ DKLGFIPK DKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILFWV
Sbjct: 358 PIAGIGIVSFADKLGFIPKGDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILFWV 417
Query: 413 HIFAVFSMAGWIILYLSLLF 432
HIFAVFSMAGWIILYL++LF
Sbjct: 418 HIFAVFSMAGWIILYLTMLF 437
>Os08g0191000 Auxin Efflux Carrier family protein
Length = 455
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 161/438 (36%), Positives = 255/438 (58%), Gaps = 43/438 (9%)
Query: 30 AVLPIAKVFTVCFMGFLMASKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGRAITIEKM 89
AV+P+ K+ + +G ++++ I+ KLL+ LVF+L LPCLIF LG+++TI+ +
Sbjct: 23 AVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLVFALFLPCLIFVHLGQSVTIQNI 82
Query: 90 LQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVXXXXXXXXXXXPLVLIAALCR 149
L WW+IPVN+++ G ++G++VA I RPP +F+FTV P+ +I ++C
Sbjct: 83 LDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFTVIMTGFGNTGNLPIAIIGSVCH 142
Query: 150 DPTNPFGDSDKCNEDGNAYISFGQWVGAIIVYTYVFKMLAPP------PGESFDSAEEDI 203
+PFG C+ G AY+SF QWV I+VYT V+ M+ PP GE + EE
Sbjct: 143 TTDHPFGPG--CHRKGVAYVSFAQWVAVILVYTLVYHMMEPPMQFYEIVGEGNEIVEE-- 198
Query: 204 LPIKASG-DNVVPEKGKYPTSTRTSTVPENEPLLS--------------------SEGD- 241
P + S + + ++P T P ++ EG
Sbjct: 199 -PAQISNYSRSLLHEAEWPGMADKETEHSKTPFIARVFMSISGSSQNTFPDIDFAEEGTS 257
Query: 242 -------KNVSTSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLT 294
K++ K++ +R + + + +LQPP IAS+ AI IG+VP+ K+FV
Sbjct: 258 GAGPSSPKSLRCLAEPKVVRRIRVVAEKTPIQHVLQPPTIASLLAIVIGMVPLFKDFVFV 317
Query: 295 DDAPLFFFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILVPL 354
DAPL FFTDS IL +A++P ++L +GG L +GP + N LG+RT II ARL+++P
Sbjct: 318 PDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKD--NALGIRTITGIIVARLLILPC 375
Query: 355 AGVGIIVLVDKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVANLRGCG-KESAAILFWVH 413
G+G+++L D+L + ++D M++FVL LQ+S P+++L GA+A+LRG KE++A+LFW H
Sbjct: 376 IGIGVVLLADRLHLLVEEDHMYRFVLSLQYSTPSAILLGAIASLRGYAVKEASALLFWQH 435
Query: 414 IFAVFSMAGWIILYLSLL 431
I AV S++ ++I+Y LL
Sbjct: 436 ICAVLSLSIYLIVYFRLL 453
>Os09g0554300 Auxin Efflux Carrier family protein
Length = 428
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 215/432 (49%), Gaps = 32/432 (7%)
Query: 24 FDMLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGRA 83
+L A +PI +V + +G +AS Y IL + + +N +VF++ P L+F+ L +
Sbjct: 4 LSLLLVASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASLAKT 63
Query: 84 ITIEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVXXXXXXXXXXXPLVL 143
+T+ ++ WW++PVNI + + G +G++ I++PP + + L++
Sbjct: 64 VTLSDVISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLLLII 123
Query: 144 IAALCRDPTNPFG-DSDKCNEDGNAYISFGQWVGAIIVYTYVF-------KMLAPPPGES 195
+ A+C + NPFG D C G +Y S +G + ++T+ + KM +S
Sbjct: 124 VPAVCDEDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKAGKMYHKMQSKS 183
Query: 196 FDS-AEEDILPIKASGDNVVPEKGKYPTSTRTSTV-------PENE-------PLLSSEG 240
A+ D A G + V G+ + + + PE+ PLL+ E
Sbjct: 184 IQCPADSDEEHHPAQGHDQVKLDGETAYADEEAALLVSAKLAPEHNEENQMEAPLLTCER 243
Query: 241 DKNVSTSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLTDDAPLF 300
+ + + V +V ++L+ PP ++++ +G+VP LK+ V+ + APL
Sbjct: 244 EIANKGGFWTNLKETVHQVV-----EELMAPPTVSAILGFVVGLVPWLKSLVIGNGAPLR 298
Query: 301 FFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILVPLAGVGII 360
+S ++G IPCI L +GGNL G + + V T+ I R ++ PL G+ ++
Sbjct: 299 VIQESLQLMGNGTIPCITLILGGNLTQGLRKSVLKRTVIITIVCI--RYVIQPLIGMAVV 356
Query: 361 VLVDKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILF-WVHIFAVFS 419
+GF+P D ++++VL++Q ++P ++ G +A L G+E +++F W ++ A +
Sbjct: 357 HAAYGVGFLPH-DPLYRYVLMMQFALPPAMNIGTMAQLFDVGQEECSVIFLWTYLIAAIA 415
Query: 420 MAGWIILYLSLL 431
+ W +++S+L
Sbjct: 416 LTTWSTIFMSIL 427
>Os09g0555100 Auxin Efflux Carrier family protein
Length = 387
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 202/393 (51%), Gaps = 34/393 (8%)
Query: 26 MLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGRAIT 85
+L A +P+ +V + +G +AS Y NIL + +N +VF++ P L+F+ L R +T
Sbjct: 6 LLLVASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASLARTVT 65
Query: 86 IEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVXXXXXXXXXXXPLVLIA 145
++ WW++P+NI + ++G +G++ I++PP + + L+++
Sbjct: 66 FSDVISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLLLIVVP 125
Query: 146 ALCRDPTNPFG-DSDKCNEDGNAYISFGQWVGAIIVYTYVFKML---------APPPGES 195
A+C + NPFG DS +C G +Y S +G + ++T+ + ++ P +
Sbjct: 126 AVCDEDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKKKRDQMYHQPNSTQC 185
Query: 196 FDSAEEDIL--PIKASGDNV-VPEKGKYPTSTRTSTVPENE----PLLSSEGD--KNVS- 245
D ++E+ KA+G+ E+ P S + + E PLLS E K S
Sbjct: 186 LDDSDEEHHSKKFKANGEAAYADEEATLPVSAKLAQHNEENQMEAPLLSCESKVAKKCSW 245
Query: 246 --TSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLTDDAPLFFFT 303
T+L I +V ++L+ PP ++++ G+VP LK+ V+ D APL
Sbjct: 246 TTTNLKDTIHHVV---------EELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLRVIQ 296
Query: 304 DSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILVPLAGVGIIVLV 363
DS ++G IPC+ L +GGNL+ G + + L +AI+ R +++PL G+ ++
Sbjct: 297 DSIQLMGNGTIPCVTLILGGNLIKGLRK--SELKRTVIIAIVCIRYVILPLVGIAVVHGA 354
Query: 364 DKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVA 396
+GF+P D ++++VL++Q ++P ++ G ++
Sbjct: 355 YWVGFLPH-DPLYRYVLMMQFALPPAMTIGNLS 386
>Os09g0491740 Auxin Efflux Carrier family protein
Length = 379
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 185/372 (49%), Gaps = 14/372 (3%)
Query: 23 VFDMLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGR 82
+ ++ A +P+ + V +G +A+ +V IL + RK LN +VF + P L+ + L +
Sbjct: 3 LLELFITACVPVLNMLLVTGVGSFLATDFVGILNKDARKYLNNIVFYVFNPSLVATYLAQ 62
Query: 83 AITIEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVXXXXXXXXXXXPLV 142
IT+E + + W++PVNI++ G ++G++V + R P + L+
Sbjct: 63 TITLEGLAKLWFMPVNILLACTFGLILGWIVVHVTRAPARLRGLILGCCSAGNWGNIFLI 122
Query: 143 LIAALCRDPTNPFGDSDKCNEDGNAYISFGQWVGAIIVYTYVFK-MLAPPPGESFDSAEE 201
+I ALC++ +PFG D C+ G AY S +GA+ ++T + M A +A
Sbjct: 123 IIPALCKEKGSPFGAPDVCHTYGLAYSSLSMALGAVFLWTVAYNIMRATSKVADEGNART 182
Query: 202 DILPIKASGDNV---VPEKGKYPTSTRTSTVP--ENEPLLSSEGDKNVSTSLGSKIMGIV 256
+ + SG + E P T+P N + SS+ +L + V
Sbjct: 183 NDTKVSNSGSSTGTASEENLSIPNDNNQCTLPLISNSSVPSSK----TKVTLSERAKRFV 238
Query: 257 RSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLTDDAPLFFFTDSCLILGEAMIPC 316
SM + K++ P IA + IG P+++N ++ ++APL +S ++G IP
Sbjct: 239 SSMFGAIDFKKIFAPSTIAVIIGFIIGGTPLIRNAIIGENAPLRVIHESADLIGGGAIPS 298
Query: 317 ILLAVGGNLVDG-PGEGSNRLGVRTTVAIIFARLILVPLAGVGIIVLVDKLGFIPKDDKM 375
+ L +GGNL++G GE S + V +V ++ R IL+P G ++ LG I D +
Sbjct: 299 VTLIMGGNLLNGLRGEASVQPSVIASVIVV--RYILLPSLGTLLVKSAVHLGLI-HPDPL 355
Query: 376 FKFVLLLQHSMP 387
++F+LLLQ+++P
Sbjct: 356 YQFILLLQYAVP 367
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.142 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,455,958
Number of extensions: 600322
Number of successful extensions: 1691
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1676
Number of HSP's successfully gapped: 7
Length of query: 432
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 328
Effective length of database: 11,605,545
Effective search space: 3806618760
Effective search space used: 3806618760
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)