BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0814900 Os01g0814900|AK071859
(279 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0814900 Similar to Cytochrome b5 reductase 545 e-155
Os05g0488900 Similar to Cytochrome b5 reductase 468 e-132
Os01g0174300 NADH:cytochrome b5 reductase (CBR) family protein 224 5e-59
Os08g0468700 Similar to Nitrate reductase [NADH] 1 (EC 1.7.... 201 5e-52
Os08g0468100 Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1) 201 5e-52
AK119949 187 7e-48
Os02g0770800 Similar to Nitrate reductase [NAD(P)H] (EC 1.7... 167 1e-41
AK110249 124 1e-28
>Os01g0814900 Similar to Cytochrome b5 reductase
Length = 279
Score = 545 bits (1405), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/279 (94%), Positives = 264/279 (94%)
Query: 1 MDLLHGESVQTTXXXXXXXXXXXXXXXFLLLRSRKPKGCLDPENFKKFKLVEKKQISHNV 60
MDLLHGESVQTT FLLLRSRKPKGCLDPENFKKFKLVEKKQISHNV
Sbjct: 1 MDLLHGESVQTTVAIAVAVVAVAAGGAFLLLRSRKPKGCLDPENFKKFKLVEKKQISHNV 60
Query: 61 ARFKFALPTPTSVLGLPIGQHISCRGQDATGEEVIKPYTPTTLDSDLGHFELVIKMYPQG 120
ARFKFALPTPTSVLGLPIGQHISCRGQDATGEEVIKPYTPTTLDSDLGHFELVIKMYPQG
Sbjct: 61 ARFKFALPTPTSVLGLPIGQHISCRGQDATGEEVIKPYTPTTLDSDLGHFELVIKMYPQG 120
Query: 121 RMSHHFREMKVGDYMSVKGPKGRFRYQVGQVRAFGMLAGGSGITPMFQVARAILENPNDI 180
RMSHHFREMKVGDYMSVKGPKGRFRYQVGQVRAFGMLAGGSGITPMFQVARAILENPNDI
Sbjct: 121 RMSHHFREMKVGDYMSVKGPKGRFRYQVGQVRAFGMLAGGSGITPMFQVARAILENPNDI 180
Query: 181 TKVHLVYANVTHDDILLKEELDNMAKTYPDRFKIYYVLNQPPEVWNGGVGFVSQDMIKAH 240
TKVHLVYANVTHDDILLKEELDNMAKTYPDRFKIYYVLNQPPEVWNGGVGFVSQDMIKAH
Sbjct: 181 TKVHLVYANVTHDDILLKEELDNMAKTYPDRFKIYYVLNQPPEVWNGGVGFVSQDMIKAH 240
Query: 241 LPAPAEDIQILRCGPPPMNKAMAAHLDELGYTKEMQFQF 279
LPAPAEDIQILRCGPPPMNKAMAAHLDELGYTKEMQFQF
Sbjct: 241 LPAPAEDIQILRCGPPPMNKAMAAHLDELGYTKEMQFQF 279
>Os05g0488900 Similar to Cytochrome b5 reductase
Length = 282
Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust.
Identities = 217/247 (87%), Positives = 234/247 (94%)
Query: 33 SRKPKGCLDPENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHISCRGQDATGE 92
S+KPKGCLDPENFK+FKLVEK+QISHNVA+F+FALPTP SVLGLPIGQHISCRGQDATGE
Sbjct: 36 SKKPKGCLDPENFKEFKLVEKRQISHNVAKFRFALPTPASVLGLPIGQHISCRGQDATGE 95
Query: 93 EVIKPYTPTTLDSDLGHFELVIKMYPQGRMSHHFREMKVGDYMSVKGPKGRFRYQVGQVR 152
EVIKPYTPTTLDSDLG FELVIKMYPQGRMSHHF EMKVGDY+SV+GPKGRF+YQ GQVR
Sbjct: 96 EVIKPYTPTTLDSDLGRFELVIKMYPQGRMSHHFHEMKVGDYLSVRGPKGRFKYQPGQVR 155
Query: 153 AFGMLAGGSGITPMFQVARAILENPNDITKVHLVYANVTHDDILLKEELDNMAKTYPDRF 212
AFGMLAGGSGITPMFQV RAILENP+D TKVHL+YANVT+DDILLKEELD+M +TYPDRF
Sbjct: 156 AFGMLAGGSGITPMFQVTRAILENPSDNTKVHLIYANVTYDDILLKEELDSMVETYPDRF 215
Query: 213 KIYYVLNQPPEVWNGGVGFVSQDMIKAHLPAPAEDIQILRCGPPPMNKAMAAHLDELGYT 272
KIYYVLNQPPE+WNGGVGFVS +MI+ H PAPA DIQILRCGPPPMNKAMA HL+ LGYT
Sbjct: 216 KIYYVLNQPPEIWNGGVGFVSMEMIQTHCPAPAADIQILRCGPPPMNKAMAEHLENLGYT 275
Query: 273 KEMQFQF 279
KEMQFQF
Sbjct: 276 KEMQFQF 282
>Os01g0174300 NADH:cytochrome b5 reductase (CBR) family protein
Length = 311
Score = 224 bits (571), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 166/261 (63%), Gaps = 20/261 (7%)
Query: 37 KGCLDPENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHISCR---GQDATGEE 93
K L+P+ + +FKL EK +SHN F+F+ P++ LGL + + R G++ G
Sbjct: 53 KVALNPDKWLEFKLQEKATVSHNSQLFRFSF-DPSTKLGLDVASCLITRAPIGEEVEGGR 111
Query: 94 --VIKPYTPTTLDSDLGHFELVIKMYPQGRMSHHFREMKVGDYMSVKGPKGRFRYQVGQV 151
VI+PYTP + G+F+L+IK+YP G+MS +F +K GD + VKGP + RY
Sbjct: 112 KFVIRPYTPISDPDSKGYFDLLIKVYPDGKMSQYFASLKPGDVVEVKGPIEKLRYSPNMK 171
Query: 152 RAFGMLAGGSGITPMFQVARAILENPNDITKVHLVYANVTHDDILLKEELDNMAKTYPDR 211
+ GM+AGG+GITPM QV RAIL+NP+D T+V L+YANV+ DDILLK ELD +A +YP+
Sbjct: 172 KQIGMIAGGTGITPMLQVVRAILKNPDDNTQVSLIYANVSPDDILLKRELDRLASSYPN- 230
Query: 212 FKIYYVLNQPPEVWNGGVGFVSQDMIKAHLPAPAEDIQILRCGPPPM------NKA---- 261
FK++Y +++P W GGVG++S+D+ LP P ED IL CGPP M +KA
Sbjct: 231 FKVFYTVDKPSNDWRGGVGYISKDIALKGLPRPGEDSLILVCGPPGMMNHISGDKAKDRS 290
Query: 262 ---MAAHLDELGYTKEMQFQF 279
+ L ELGYT EM ++F
Sbjct: 291 QGELTGILKELGYTAEMVYKF 311
>Os08g0468700 Similar to Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)
Length = 916
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 168/272 (61%), Gaps = 27/272 (9%)
Query: 31 LRSRKPKGCLDPENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHI-SCRGQDA 89
+++ P P + +LV+KK++S +V F+FALP+ VLGLP+G+HI C +
Sbjct: 644 IKAPAPVALSSPRDKVPCQLVDKKELSRDVRLFRFALPSSDQVLGLPVGKHIFVCASIE- 702
Query: 90 TGEEVIKPYTPTTLDSDLGHFELVIKMY-----PQ----GRMSHHFREMKVGDYMSVKGP 140
G+ ++ YTPT++ ++GHF+L+IK+Y P+ G M+ + + VG Y+ VKGP
Sbjct: 703 -GKLCMRAYTPTSMVDEVGHFDLLIKVYFKNEHPKFPDGGLMTQYLDSLPVGAYIDVKGP 761
Query: 141 KGRFRY----------QVGQVRAFGMLAGGSGITPMFQVARAIL-ENPNDITKVHLVYAN 189
G Y + R M+AGGSGITPM+QV +++L + P D T++HLVYAN
Sbjct: 762 LGHVEYTGRGEFVINGKPRNARRLAMIAGGSGITPMYQVIQSVLRDQPEDTTEMHLVYAN 821
Query: 190 VTHDDILLKEELDNMAKTYPDRFKIYYVLNQ---PPEVWNGGVGFVSQDMIKAHLPAPAE 246
T DDILL++ELD A YPDR K++YV++Q P E W GVGFV++++++ H+P +
Sbjct: 822 RTEDDILLRDELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYGVGFVTEEVLREHVPEGGD 881
Query: 247 DIQILRCGPPPMNK-AMAAHLDELGYTKEMQF 277
D L CGPPPM K A++ +L+++ Y F
Sbjct: 882 DTLALACGPPPMIKFAVSPNLEKMKYDMANSF 913
>Os08g0468100 Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)
Length = 916
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 167/272 (61%), Gaps = 27/272 (9%)
Query: 31 LRSRKPKGCLDPENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHI-SCRGQDA 89
+++ P P + +LV+KK++S +V F+FALP+ VLGLP+G+HI C
Sbjct: 644 IKAPAPVALSSPRDKVPCQLVDKKELSRDVRLFRFALPSSDQVLGLPVGKHIFVC--ASI 701
Query: 90 TGEEVIKPYTPTTLDSDLGHFELVIKMY-----PQ----GRMSHHFREMKVGDYMSVKGP 140
G+ ++ YTPT++ ++GHF+L+IK+Y P+ G M+ + + VG Y+ VKGP
Sbjct: 702 EGKLCMRAYTPTSMVDEVGHFDLLIKVYFKNEHPKFPDGGLMTQYLDSLPVGAYIDVKGP 761
Query: 141 KGRFRY----------QVGQVRAFGMLAGGSGITPMFQVARAIL-ENPNDITKVHLVYAN 189
G Y + R M+AGGSGITPM+QV +++L + P D T++HLVYAN
Sbjct: 762 LGHVEYTGRGEFVINGKPRNARRLAMIAGGSGITPMYQVIQSVLRDQPEDTTEMHLVYAN 821
Query: 190 VTHDDILLKEELDNMAKTYPDRFKIYYVLNQ---PPEVWNGGVGFVSQDMIKAHLPAPAE 246
T DDILL++ELD A YPDR K++YV++Q P E W GVGFV++++++ H+P +
Sbjct: 822 RTEDDILLRDELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYGVGFVTEEVLREHVPEGGD 881
Query: 247 DIQILRCGPPPMNK-AMAAHLDELGYTKEMQF 277
D L CGPPPM K A++ +L+++ Y F
Sbjct: 882 DTLALACGPPPMIKFAVSPNLEKMKYDMANSF 913
>AK119949
Length = 337
Score = 187 bits (475), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 151/252 (59%), Gaps = 15/252 (5%)
Query: 43 ENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHISCRGQDATGEE-VIKPYTPT 101
+ F K L + I+HN + +F L +V GL + + + + ++ I+PYTP
Sbjct: 86 QGFIKLPLDSVEVINHNTKKLRFKLNEEDAVSGLNVASALITKYKGPEMKKPAIRPYTPV 145
Query: 102 TLDSDLGHFELVIKMYPQGRMSHHFREMKVGDYMSVKGPKGRFRYQVGQVRAFGMLAGGS 161
+ + G+ + ++K YP G MS H M G + +KGP ++ ++ + ++AGG+
Sbjct: 146 SDEDTPGYIDFIVKKYPGGIMSEHMHSMTPGQSLEMKGPIPKYPWEANKHDHIALIAGGT 205
Query: 162 GITPMFQVARAILENPNDITKVHLVYANVTHDDILLKEELDNMAKTYPDRFKIYYVLNQP 221
GITPM+Q+ARAI +NP D TKV LV+ NVT DDILLK E + + +P+RF+ +YVL+QP
Sbjct: 206 GITPMYQLARAIFKNPEDKTKVTLVFGNVTADDILLKSEFEELENKFPNRFRAFYVLDQP 265
Query: 222 PEVWNGGVGFVSQDMIKAHLPAPAE-DIQILRCGPPPMNKA-------------MAAHLD 267
P+ W G GF++++++K +PAP E D+++ CGPP + KA ++ +L
Sbjct: 266 PKDWPQGKGFITKELLKTVIPAPNEKDVKVFVCGPPGLYKAISGNKNSPSDQGELSGYLA 325
Query: 268 ELGYTKEMQFQF 279
ELGY+K+ F+F
Sbjct: 326 ELGYSKDQVFKF 337
>Os02g0770800 Similar to Nitrate reductase [NAD(P)H] (EC 1.7.1.2)
Length = 889
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 152/255 (59%), Gaps = 25/255 (9%)
Query: 41 DPENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHISCRGQDATGEEVIKPYTP 100
+P K +L++KK +S+NV F+FALP+P LGLP+G+H+ G+ ++ YTP
Sbjct: 627 NPREKVKCRLMDKKSLSYNVRLFRFALPSPDQKLGLPVGKHVYVCASIG-GKLCMRAYTP 685
Query: 101 TTLDSDLGHFELVIKMYPQGR---------MSHHFREMKVGDYMSVKGP------KGRFR 145
T+ ++G+ EL+IK+Y +G MS + + +G + +KGP GR
Sbjct: 686 TSSVDEVGYIELLIKIYFKGEDPKFPDGGLMSQYLDYLPLGATIDIKGPIGHIEYAGRGA 745
Query: 146 YQVGQVRAFG----MLAGGSGITPMFQVARAIL-ENPNDITKVHLVYANVTHDDILLKEE 200
+ V R F M+AGG+GITP++QV +A+L + P+D T++H+VYAN T DD+LL+EE
Sbjct: 746 FTVNGERRFARRLAMVAGGTGITPVYQVIQAVLWDQPDDGTEMHVVYANRTEDDMLLREE 805
Query: 201 LDNMAKTYPDRFKIYYVLNQ---PPEVWNGGVGFVSQDMIKAHLPAPAEDIQILRCGPPP 257
+D A +P R K++YV+++ P + W GVG V + ++ HLP + L CGPP
Sbjct: 806 IDRWAAAHPARLKVWYVVSKVARPEDGWEYGVGRVDERTLREHLPPGDGETLALVCGPPA 865
Query: 258 MNKA-MAAHLDELGY 271
M + + L+++GY
Sbjct: 866 MVECTVRPGLEKMGY 880
>AK110249
Length = 980
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 141/298 (47%), Gaps = 58/298 (19%)
Query: 40 LDPENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHISCRGQDA---TGE--EV 94
LDP+ ++ +LV K+ IS + F+FAL LGLP+GQH+ R + TGE V
Sbjct: 682 LDPKKWRATRLVSKQIISPDARIFRFALAGSDQELGLPVGQHVFVRVRRKDPKTGEIETV 741
Query: 95 IKPYTPTTLDSDLGHFELVIKMY-----------------PQGRMSHHFREMKVGD---- 133
+ YTP + ++ G +++IK+Y G+M+ + +
Sbjct: 742 QRAYTPYSGNTQRGFLDILIKVYFPSLPAQAGGEGGNVSFEGGKMTMLLENIDLASQADA 801
Query: 134 --YMSVKGPKGRFRY------------QVGQVRAFGMLAGGSGITPMFQVARAILEN--- 176
+ +KGP G F Y + +VR M+AGGSGITP++ +AI +
Sbjct: 802 NLSIELKGPLGSFTYLGDRQIKWRPTNAIRRVRKLAMIAGGSGITPIWSTLKAIADEVLA 861
Query: 177 ----PNDITKVHLVYANVTHDDILLKEELDNMAKTYPDRFKIYYVLNQ--PPEVWNGGVG 230
+D ++ +VY N T DIL++EEL+ + +++VL+ W G G
Sbjct: 862 GGPAASDPIQMWIVYGNRTEQDILIREELERLRTALQGNLYVWHVLSSCASDSTWAMGRG 921
Query: 231 FVSQDMIKAHLPAPA---------EDIQILRCGPPPMNKAMAAHLDELGYTKEMQFQF 279
V+ D ++ HLP P ED L CGPPPM KA++A L +LG+ + F
Sbjct: 922 HVNLDCLRQHLPPPPPVPSSPEELEDTLALVCGPPPMEKAVSAGLKQLGWDLDRTVVF 979
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.139 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,047,773
Number of extensions: 435564
Number of successful extensions: 824
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 802
Number of HSP's successfully gapped: 8
Length of query: 279
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 179
Effective length of database: 11,814,401
Effective search space: 2114777779
Effective search space used: 2114777779
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)