Os05g0488900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome b5 reductase.
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Os05g0488900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome b5 reductase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.16 | 0.364 | 8.32 | -0.686 | 0.732 | -1.33 | -0.244 | -0.424 | -0.136 | 22 | 27.32 | 109 | -- | -- |
| 60.44 | 0.362 | 8.33 | -0.74 | 0.733 | -1.3 | -0.321 | -- | -0.148 | 21.9 | 27.33 | 112 | -- | -- |
| 60.37 | 0.362 | 8.32 | -0.675 | 0.733 | -1.34 | -- | -0.507 | -0.135 | 22.1 | 27.34 | 100 | -- | -- |
| 60.81 | 0.363 | 8.33 | -0.751 | 0.736 | -1.33 | -- | -- | -0.155 | 22 | 27.51 | 99 | -- | -- |
| 82.26 | 0.422 | 8.32 | -0.822 | -- | -1.36 | -- | 0.189 | -0.179 | -- | 28.59 | 468 | -- | -- |
| 84.52 | 0.431 | 8.27 | -0.42 | 0.721 | -- | -0.155 | -- | 0.132 | 20.1 | -- | -- | -- | -- |
| 84.59 | 0.431 | 8.27 | -0.415 | 0.722 | -- | -- | -- | 0.132 | 20 | -- | -- | -- | -- |
| 82.27 | 0.422 | 8.31 | -0.764 | -- | -1.34 | -- | -- | -0.158 | -- | 28.49 | 467 | -- | -- |
| 74.44 | 0.404 | 8.3 | -- | 0.784 | -0.976 | -- | -- | 0.00974 | 21.6 | 29.46 | 60 | -- | -- |
| 113.09 | 0.497 | 8.25 | -0.422 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 89.14 | 0.442 | 8.26 | -- | 0.724 | -- | -- | -- | 0.179 | 20 | -- | -- | -- | -- |
| 96.18 | 0.457 | 8.28 | -- | -- | -1.08 | -- | -- | -0.00795 | -- | 30.08 | 480 | -- | -- |
| 117.79 | 0.507 | 8.24 | -- | -- | -- | -- | -- | 0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.52 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 11 | 54.73 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 17 | 55.57 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 35 | 56.88 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 71 | 58.98 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 21 |
| 76 | 59.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 77 | 59.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 106 | 59.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 125 | 60.18 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 126 | 60.18 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 131 | 60.23 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 153 | 60.54 | temperature | 15 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 164 | 60.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 173 | 60.77 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 201 | 61.00 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 203 | 61.02 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 207 | 61.05 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 240 | 61.31 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 330 | 61.90 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 382 | 62.28 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 11 |
| 404 | 62.50 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 455 | 62.83 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 9 |
| 485 | 63.03 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 510 | 63.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 519 | 63.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 596 | 63.67 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 852 | 64.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 853 | 64.76 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 14 |
| 918 | 65.03 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 23 |
| 973 | 65.25 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 23 |