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Os01g0174300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : NADH:cytochrome b5 reductase (CBR) family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.7 (0.019) R2 : 0.396
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.926 (0.0541) R2dE : 0.387 R2E : 0.383
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.117 (0.04) R2dN8 : 0.0137 R2N8 : 0.00886
σ : 0.357
deviance : 58.77
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C
peak time of C : --
E
wheather : humidity
threshold : 77
memory length : 663
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.58 0.344 9.7 0.276 0.242 -1.07 0.383 0.493 0.114 11 80 722 -- --
53.8 0.342 9.69 0.301 0.21 -1.04 0.647 -- 0.126 9.65 80.17 682 -- --
54.01 0.342 9.7 0.262 0.26 -1.09 -- 0.794 0.117 11.4 80.99 738 -- --
55.2 0.346 9.69 0.32 0.247 -1.06 -- -- 0.125 11.6 81 733 -- --
55.32 0.346 9.7 0.233 -- -0.924 -- 0.76 0.139 -- 78 668 -- --
76.77 0.411 9.71 0.357 0.531 -- -0.771 -- 0.156 19 -- -- -- --
78.26 0.414 9.71 0.373 0.531 -- -- -- 0.155 18.8 -- -- -- --
56.59 0.35 9.68 0.332 -- -0.87 -- -- 0.174 -- 81 616 -- --
57.69 0.354 9.71 -- 0.324 -1.12 -- -- 0.0688 13.4 80.71 825 -- --
93.01 0.451 9.69 0.361 -- -- -- -- 0.144 -- -- -- -- --
81.93 0.423 9.72 -- 0.527 -- -- -- 0.113 18.8 -- -- -- --
58.77 0.357 9.7 -- -- -0.926 -- -- 0.117 -- 77 663 -- --
96.46 0.458 9.7 -- -- -- -- -- 0.104 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.46 humidity 70 720 > th dose dependent rect. 7 16
2 51.48 humidity 70 720 > th dose dependent rect. 9 14
4 51.69 humidity 70 720 > th dose dependent sin 20 NA
6 51.89 humidity 80 720 > th dose independent rect. 8 14
17 52.08 humidity 80 720 > th dose independent sin 20 NA
31 52.41 humidity 80 720 > th dose independent rect. 7 20
34 52.43 humidity 70 720 > th dose dependent rect. 6 21
60 52.74 humidity 80 720 < th dose independent rect. 8 19
61 52.76 humidity 80 720 < th dose independent rect. 8 14
92 52.99 humidity 80 1440 < th dose independent rect. 24 20
120 53.17 humidity 80 1440 > th dose independent rect. 1 20
140 53.26 humidity 80 1440 < th dose independent sin 23 NA
144 53.27 humidity 80 720 < th dose independent sin 20 NA
147 53.27 humidity 80 720 > th dose independent rect. 23 23
193 53.46 humidity 70 1440 > th dose dependent rect. 9 7
213 53.51 humidity 70 720 > th dose dependent rect. 9 22
232 53.58 humidity 80 720 > th dose independent no NA NA
262 53.68 humidity 80 720 > th dose independent rect. 18 23
456 54.10 humidity 80 1440 < th dose independent no NA NA
554 54.35 humidity 70 720 > th dose dependent no NA NA
555 54.35 humidity 70 720 > th dose dependent rect. 2 23
560 54.37 humidity 70 1440 > th dose dependent rect. 2 19
562 54.38 humidity 80 1440 < th dose independent rect. 13 23
570 54.39 humidity 70 720 > th dose dependent rect. 24 23
623 54.49 humidity 80 1440 < th dose independent rect. 15 23
637 54.52 humidity 70 14400 < th dose independent rect. 19 3
682 54.61 humidity 70 720 > th dose dependent rect. 17 23
723 54.68 humidity 70 14400 < th dose dependent rect. 18 13
734 54.71 humidity 70 14400 < th dose dependent rect. 18 4
798 54.84 humidity 70 14400 > th dose independent rect. 19 2
824 54.92 humidity 70 14400 > th dose independent rect. 19 6