BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0786700 Os01g0786700|J065061D03
(300 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0786700 Conserved hypothetical protein 531 e-151
Os09g0344800 Protein of unknown function DUF81 family protein 94 1e-19
Os03g0726500 Conserved hypothetical protein 91 1e-18
Os08g0389700 Protein of unknown function DUF81 family protein 91 1e-18
Os08g0387200 Protein of unknown function DUF81 family protein 84 1e-16
>Os01g0786700 Conserved hypothetical protein
Length = 300
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/300 (89%), Positives = 268/300 (89%)
Query: 1 MDLGTVLACIXXXXXXXXXXXXXXXXXXXYVPILNIVAGLSLKTATAFSTFMVTGGTLSN 60
MDLGTVLACI YVPILNIVAGLSLKTATAFSTFMVTGGTLSN
Sbjct: 1 MDLGTVLACILSFLAAAFSSAGGVGGGSLYVPILNIVAGLSLKTATAFSTFMVTGGTLSN 60
Query: 61 VLYTLIVLRGHEKGGHQPLIDYDIAVVSQPCLLLGVSVGVICNVMFPEWLITALFAVFLA 120
VLYTLIVLRGHEKGGHQPLIDYDIAVVSQPCLLLGVSVGVICNVMFPEWLITALFAVFLA
Sbjct: 61 VLYTLIVLRGHEKGGHQPLIDYDIAVVSQPCLLLGVSVGVICNVMFPEWLITALFAVFLA 120
Query: 121 SATFKTYGTGMKRWRAETAAARRMLEGGSSLGDGAGEALLGQKDGDGHRRQCVDLMVLVT 180
SATFKTYGTGMKRWRAETAAARRMLEGGSSLGDGAGEALLGQKDGDGHRRQCVDLMVLVT
Sbjct: 121 SATFKTYGTGMKRWRAETAAARRMLEGGSSLGDGAGEALLGQKDGDGHRRQCVDLMVLVT 180
Query: 181 IWLCFFVIHLFIGGEGAKTASSTTMFMVLFCASMSMVQFIILGVDGIVTALVYAITCFVA 240
IWLCFFVIHLFIGGEGAKTASSTTMFMVLFCASMSMVQFIILGVDGIVTALVYAITCFVA
Sbjct: 181 IWLCFFVIHLFIGGEGAKTASSTTMFMVLFCASMSMVQFIILGVDGIVTALVYAITCFVA 240
Query: 241 SIVGLVVIQGTIRKSGRVSLIVFMXXXXXXXXXXXXXCSGAVRVWVQYTSGQYMGFKMPC 300
SIVGLVVIQGTIRKSGRVSLIVFM CSGAVRVWVQYTSGQYMGFKMPC
Sbjct: 241 SIVGLVVIQGTIRKSGRVSLIVFMVAAILALSVVVIACSGAVRVWVQYTSGQYMGFKMPC 300
>Os09g0344800 Protein of unknown function DUF81 family protein
Length = 481
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 25/179 (13%)
Query: 30 YVPILNIVAGLSLKTATAFSTFMVTGGTLSNVLYTLIVLRGHEKGGHQPLIDYDIAVVSQ 89
+VP+L ++ G K++TA S M+ G +S V Y L + P+IDYD+A++ Q
Sbjct: 111 FVPMLTLIIGFDPKSSTAISKCMIMGAAVSTVYYNL---KLKHPTLDMPVIDYDLALLIQ 167
Query: 90 PCLLLGVSVGVICNVMFPEWLITALFAVFLASATFKTYGTGMKRWRAET----AAARRML 145
P L+LG+S+GVI NV+FP+WL+T L + + K + G++ W+ ET AA+R+
Sbjct: 168 PMLMLGISIGVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLE 227
Query: 146 EGG-----SSLGDGAGEALLGQKDGDGHRRQCVDLM---------VLVTIWLCFFVIHL 190
+ + L G G ++ D + LM +L +W+ F V+ +
Sbjct: 228 QTSEEPEYAPLPTGPGAVADAKRPSD----EAASLMKNIYWKEFGLLAFVWMAFLVLQV 282
>Os03g0726500 Conserved hypothetical protein
Length = 475
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 26/199 (13%)
Query: 30 YVPILNIVAGLSLKTATAFSTFMVTGGTLSNVLYTLIVLRGHEKGGHQPLIDYDIAVVSQ 89
+VP+LN++ G K+A A S M+ G + S+V Y L V ++ P+IDY +A++ Q
Sbjct: 96 FVPMLNLLVGFDTKSAAALSKCMIMGASASSVWYNLQVSHPTKEA---PVIDYKLALLFQ 152
Query: 90 PCLLLGVSVGVICNVMFPEWLITALFAVFLASATFKTYGTGMKRWRAET----AAARRML 145
P L+LG+++GV +V+FP WLIT L + + +++ G+ W+ ET R
Sbjct: 153 PMLMLGITIGVELSVIFPYWLITVLIIILFIGTSSRSFYKGILMWKDETRIQMETREREE 212
Query: 146 EGGSS-------LGDGAGEALLGQKDGDGH--------RRQCVDLMVLVTIWLCFFVIHL 190
E SS + E LL Q + +++VL+T+W F V+ +
Sbjct: 213 ESKSSCAARDVVIDPSCEEPLLCQPQPKEKSALETFLFNLRWKNILVLMTVWSSFLVLQI 272
Query: 191 FIGGEGAKTASSTTMFMVL 209
F + S +T + V+
Sbjct: 273 FKNN----SQSCSTFYWVI 287
>Os08g0389700 Protein of unknown function DUF81 family protein
Length = 465
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 30 YVPILNIVAGLSLKTATAFSTFMVTGGTLSNVLYTLIVLRGHEKGGHQPLIDYDIAVVSQ 89
+VP+L ++ G K++TA S M+ G +S V Y L + P+IDYD+A++ Q
Sbjct: 95 FVPMLTLIIGFDAKSSTAISKCMIMGAAVSTVYYNL---KLKHPTLDMPVIDYDLALLIQ 151
Query: 90 PCLLLGVSVGVICNVMFPEWLITALFAVFLASATFKTYGTGMKRWRAET----AAARRML 145
P L+LG+S+GV+ NV+FP+WLIT L + + K + G++ W+ ET AA+R+
Sbjct: 152 PMLMLGISIGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLE 211
Query: 146 EGGSS-------LGDGAGEALLGQKDGDGHRRQCV---DLMVLVTIWLCFFVIHL 190
+ G A D Q V + +L +W+ F V+ +
Sbjct: 212 QIAEEPEYSPLPTGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQV 266
>Os08g0387200 Protein of unknown function DUF81 family protein
Length = 469
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 31 VPILNIVAGLSLKTATAFSTFMVTGGTLSNVLYTLIVLRGHEKGGHQPLIDYDIAVVSQP 90
+P+L ++ G K++ A S M+ G +S V L R H P+IDYD+A++ QP
Sbjct: 105 MPMLTLIIGFDAKSSVAISKCMIMGAAVSTVYCNL--KRKHPTLD-MPVIDYDLALLIQP 161
Query: 91 CLLLGVSVGVICNVMFPEWLITALFAVFLASATFKTYGTGMKRWRAET----AAARRMLE 146
L+LG+S+GVI NV+FP+WL+T L + + K + G++ W+ ET A +R +
Sbjct: 162 MLMLGISIGVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQ 221
Query: 147 GGSSLGDGAGEALLGQKDGDG-----HRRQCVDLMVLVTIWLCFFVIHL 190
L A + D H + +L +W+ F + +
Sbjct: 222 TSEELEYRPVPASESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQV 270
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.329 0.141 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,806,987
Number of extensions: 362252
Number of successful extensions: 1356
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1352
Number of HSP's successfully gapped: 5
Length of query: 300
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 200
Effective length of database: 11,814,401
Effective search space: 2362880200
Effective search space used: 2362880200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 156 (64.7 bits)