BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0369500 Os01g0369500|AK100805
(297 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0369500 C2 calcium/lipid-binding region, CaLB domain c... 365 e-101
Os05g0149100 C2 calcium/lipid-binding region, CaLB domain c... 157 8e-39
Os07g0670300 C2 calcium/lipid-binding region, CaLB domain c... 120 1e-27
Os01g0934100 C2 calcium/lipid-binding region, CaLB domain c... 117 8e-27
Os05g0370300 C2 calcium/lipid-binding region, CaLB domain c... 109 3e-24
Os07g0670200 C2 calcium/lipid-binding region, CaLB domain c... 105 3e-23
>Os01g0369500 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 297
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/189 (94%), Positives = 178/189 (94%)
Query: 1 MAYRLLELTLVSASDLKKVTLFSRMHVYAVASISGSNVPMPMHGTHADRNGGSNPAWNTV 60
MAYRLLELTLVSASDLKKVTLFSRMHVYAVASISGSNVPMPMHGTHADRNGGSNPAWNTV
Sbjct: 1 MAYRLLELTLVSASDLKKVTLFSRMHVYAVASISGSNVPMPMHGTHADRNGGSNPAWNTV 60
Query: 61 LHFPVPARFDTRGLALHVQLRARRSFGGHRDVGDVFVPLDDLLAGAHDGGEPRPASYQVR 120
LHFPVPARFDTRGLALHVQLRARRSFGGHRDVGDVFVPLDDLLAGAHDGGEPRPASYQVR
Sbjct: 61 LHFPVPARFDTRGLALHVQLRARRSFGGHRDVGDVFVPLDDLLAGAHDGGEPRPASYQVR 120
Query: 121 RPMSARAHGTLYFCYRFTDVKHPALEAIEXXXXXXXXXXXKQGQYVPMYAQDSDEKATEK 180
RPMSARAHGTLYFCYRFTDVKHPALEAIE KQGQYVPMYAQDSDEKATEK
Sbjct: 121 RPMSARAHGTLYFCYRFTDVKHPALEAIEAATATATSSATKQGQYVPMYAQDSDEKATEK 180
Query: 181 SVSSPVTAY 189
SVSSPVTAY
Sbjct: 181 SVSSPVTAY 189
>Os05g0149100 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 279
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/140 (59%), Positives = 101/140 (72%), Gaps = 2/140 (1%)
Query: 1 MAYRLLELTLVSASDLKKVTLFSRMHVYAVASISGSNVPMPMHGTHADRNGGSNPAWNTV 60
MA R+LE+TLVSA +LKKVT+FS+M VYAVASISG + +P H THADR GG +P W+
Sbjct: 1 MARRVLEVTLVSAKNLKKVTMFSKMRVYAVASISGGDPRVPTHRTHADREGGRSPMWHAP 60
Query: 61 LHFPVP-ARFDTRGLALHVQLRARRSFGGHRDVGDVFVPLDDLLAGAHDGGEPRPASYQV 119
L FP+P A D R +ALHV LRA R F G DVG+VFVP+ DL+A A +GGE R SY V
Sbjct: 61 LRFPIPDAGADMRAIALHVLLRAERVF-GDSDVGEVFVPVKDLVAAAPEGGEHRHLSYHV 119
Query: 120 RRPMSARAHGTLYFCYRFTD 139
RRP+S R G L+ Y+ TD
Sbjct: 120 RRPVSGRKCGVLHISYQITD 139
>Os07g0670300 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 310
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 1 MAYRLLELTLVSASDLKKVTLFSRMHVYAVASISGSNVPMPMHGTHADRNGGSNPAWNTV 60
MAYR+LE+TL SA DLK V SRM VYAVA+ISG P+ T D GG +PAWN
Sbjct: 1 MAYRVLEVTLHSARDLKNVNFISRMEVYAVATISGD--PLTRQCTPPDPYGGRHPAWNAT 58
Query: 61 LHFPVPARFDTRGLALHVQLRARRSFGGHRDVGDVFVPLDDLLAGAHDGGE--PRPASYQ 118
L F VP + LHV LRA RS G RD+G+V +PL D+L+G +D G P+ ASYQ
Sbjct: 59 LRFTVPPTAASAAGCLHVLLRAERSL-GDRDIGEVIIPLADVLSGPYDLGARPPQFASYQ 117
Query: 119 VRRPMSARAHGTLYFCYRFTDVKHP 143
VR+ + G L+ YR V P
Sbjct: 118 VRKLHRSETRGVLHLSYRLGPVVAP 142
>Os01g0934100 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 358
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 86/144 (59%), Gaps = 8/144 (5%)
Query: 1 MAYRLLELTLVSASDLKKVTLFSRMHVYAVASISGSNVPMPMHGTHADRNGGSNPAWNTV 60
MA R LELTL+SA DLK V L S+M VYAV S+SG DR GG NPAWN
Sbjct: 1 MAQRTLELTLISAKDLKDVNLLSKMEVYAVVSLSGDR--RSRQRIATDRAGGRNPAWNAA 58
Query: 61 -LHFPVPARFDTRGLALHVQLRARRSFGGHRDVGDVFVPLDDLLAGAHDGGEP-RPASYQ 118
L F VPA + +LHV LRA R+ G RDVG+V +PL +LL+GA DG P + SYQ
Sbjct: 59 PLRFTVPA---SGAGSLHVLLRAERAL-GDRDVGEVHIPLSELLSGAPDGAVPAKFVSYQ 114
Query: 119 VRRPMSARAHGTLYFCYRFTDVKH 142
VR+ S + G L F Y+ +V
Sbjct: 115 VRKISSGKPQGVLNFSYKIGEVTQ 138
>Os05g0370300 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 303
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 1 MAYRLLELTLVSASDLKKVTLFSRMHVYAVASISGSNVPMPMHGTHADRNGGSNPAW--- 57
MA R LELTL+SASDL+ V L S+M VYAV ++G P DR GG NP+W
Sbjct: 86 MACRTLELTLLSASDLRGVNLVSKMEVYAVVYLAGD--PRARQRVATDRAGGRNPSWKGK 143
Query: 58 NTVLHFPVPARFDTRGLALHVQLRARRS-FGGHRDVGDVFVPLDDLLAGAHDGGEPRP-A 115
+ + VPA G A+ V LRA R+ GG RDVG+VFVPL D+LAG+ DG A
Sbjct: 144 DATVRLAVPASGAGSG-AVRVLLRAERAGLGGDRDVGEVFVPLPDVLAGSGDGPTAAAVA 202
Query: 116 SYQVRRPMSAR-AHGTLYFCYRFTDVKHP 143
SY VR+ S+R HG L Y+ V HP
Sbjct: 203 SYPVRKVGSSRTTHGVLNLSYKLGGVVHP 231
>Os07g0670200 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 232
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 82/147 (55%), Gaps = 15/147 (10%)
Query: 1 MAYRLLELTLVSASDLKKVTLFSRMHVYAVASISGSNVPMPMHGTHADRNGGSNPAWNTV 60
MAYR LE+TL+SA +LKKV L + M VYAV S+SG+ P+ T DR+GG NP WN
Sbjct: 1 MAYRALEVTLISARNLKKVNLITPMEVYAVVSVSGN--PLARQCTLPDRHGGRNPTWNAT 58
Query: 61 LHFPVPARFDTRGLALHVQLRARRSFGGHRDVGDVFVPLDD--LLAGAHDGGEPRPASYQ 118
LH VPA G LHV LR R+ G RDVG+VFVP+ D L A AH Y
Sbjct: 59 LHLAVPA--AAPGAFLHVLLRTERAL-GDRDVGEVFVPVADLQLAAAAH-------YQYL 108
Query: 119 VRRPMSARAH-GTLYFCYRFTDVKHPA 144
V + S H G L YR V PA
Sbjct: 109 VHKVQSTTEHCGVLSLSYRLGPVVVPA 135
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,283,455
Number of extensions: 316963
Number of successful extensions: 585
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 576
Number of HSP's successfully gapped: 6
Length of query: 297
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 197
Effective length of database: 11,814,401
Effective search space: 2327436997
Effective search space used: 2327436997
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)