BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0194300 Os01g0194300|AK120715
(582 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0194300 Similar to NPR1 997 0.0
Os01g0767900 Similar to Ankyrin repeat BTB/POZ domain-conta... 370 e-102
Os03g0667100 BTB domain containing protein 345 4e-95
Os11g0141900 BTB domain containing protein 141 2e-33
Os01g0948900 Ankyrin repeat containing protein 109 7e-24
Os12g0138500 Ankyrin repeat containing protein 105 1e-22
>Os01g0194300 Similar to NPR1
Length = 582
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/582 (86%), Positives = 506/582 (86%)
Query: 1 MEPPTSHVTNAFSDSDSASXXXXXXXXXXXXXXLRRLSDNLAAAFRSPEDFAFLADARIA 60
MEPPTSHVTNAFSDSDSAS LRRLSDNLAAAFRSPEDFAFLADARIA
Sbjct: 1 MEPPTSHVTNAFSDSDSASVEEGGADADADVEALRRLSDNLAAAFRSPEDFAFLADARIA 60
Query: 61 VPXXXXXXXDLLVHRCVLSARSPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
VP DLLVHRCVLSARSPF
Sbjct: 61 VPGGGGGGGDLLVHRCVLSARSPFLRGVFARRAAAAAGGGGEDGGERLELRELLGGGGEE 120
Query: 121 XXXXXXXXRLVLDYLYSGRVGDLPKAACLCVDEDCAHVGCHPAVAFMAQVLFAASTFQVA 180
RLVLDYLYSGRVGDLPKAACLCVDEDCAHVGCHPAVAFMAQVLFAASTFQVA
Sbjct: 121 VEVGYEALRLVLDYLYSGRVGDLPKAACLCVDEDCAHVGCHPAVAFMAQVLFAASTFQVA 180
Query: 181 ELTNLFQRRLLDVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKS 240
ELTNLFQRRLLDVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKS
Sbjct: 181 ELTNLFQRRLLDVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKS 240
Query: 241 LPPDVIKQIIDARLSLGLISPENKGFPNKHVRRIHRALDSDDVELVRMLLTEGQTNLDDA 300
LPPDVIKQIIDARLSLGLISPENKGFPNKHVRRIHRALDSDDVELVRMLLTEGQTNLDDA
Sbjct: 241 LPPDVIKQIIDARLSLGLISPENKGFPNKHVRRIHRALDSDDVELVRMLLTEGQTNLDDA 300
Query: 301 FALHYAVEHCDSKITTELLDLALADVNHRNPRGYTVLHIAARRREPKIIVSLLTKGARPA 360
FALHYAVEHCDSKITTELLDLALADVNHRNPRGYTVLHIAARRREPKIIVSLLTKGARPA
Sbjct: 301 FALHYAVEHCDSKITTELLDLALADVNHRNPRGYTVLHIAARRREPKIIVSLLTKGARPA 360
Query: 361 DVTFDGRKAVQISKRLTKQGDYFGVTEEGKPSPKDRLCIEILEQAERRDPQLGEASVSLA 420
DVTFDGRKAVQISKRLTKQGDYFGVTEEGKPSPKDRLCIEILEQAERRDPQLGEASVSLA
Sbjct: 361 DVTFDGRKAVQISKRLTKQGDYFGVTEEGKPSPKDRLCIEILEQAERRDPQLGEASVSLA 420
Query: 421 MAGESLRGRLLYLENRVALARIMFPMEARVAMDIAQVDGTLEFNLGSGANPPPERQRTTV 480
MAGESLRGRLLYLENRVALARIMFPMEARVAMDIAQVDGTLEFNLGSGANPPPERQRTTV
Sbjct: 421 MAGESLRGRLLYLENRVALARIMFPMEARVAMDIAQVDGTLEFNLGSGANPPPERQRTTV 480
Query: 481 DLNESPFIMKEEHLARMTALSKTVELGKRFFPRCSNVLDKIMDDETDPVSLGRDTSAEKR 540
DLNESPFIMKEEHLARMTALSKTVELGKRFFPRCSNVLDKIMDDETDPVSLGRDTSAEKR
Sbjct: 481 DLNESPFIMKEEHLARMTALSKTVELGKRFFPRCSNVLDKIMDDETDPVSLGRDTSAEKR 540
Query: 541 KRFHDLQDVLQKAFHEDKEENDRXXXXXXXXXXXIGAIRPRR 582
KRFHDLQDVLQKAFHEDKEENDR IGAIRPRR
Sbjct: 541 KRFHDLQDVLQKAFHEDKEENDRSGLSSSSSSTSIGAIRPRR 582
>Os01g0767900 Similar to Ankyrin repeat BTB/POZ domain-containing protein
Length = 635
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/445 (46%), Positives = 285/445 (64%), Gaps = 22/445 (4%)
Query: 131 VLDYLYSGRVGDLPKAACLCVDEDCAHVGCHPAVAFMAQVLFAASTFQVAELTNLFQRRL 190
+L YLY+G++ P C D C H C PA+ F + ++AA F++ EL +LFQRRL
Sbjct: 178 LLGYLYTGKLRPAPDDVVSCADPMCPHDSCPPAIRFNVEQMYAAWAFKITELISLFQRRL 237
Query: 191 LDVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKSLPPDVIKQII 250
L+ +DK V+++L IL VA + +LE+C+ + RSNLD ++L+K LPP+V QI
Sbjct: 238 LNFVDKTLVEDVLPILQVA--FHSELTPVLEKCIRRIARSNLDNVSLDKELPPEVAVQIK 295
Query: 251 DARLSLGLISPENKG-------FPNKHVRRIHRALDSDDVELVRMLLTEGQTNLDDAFAL 303
+ R S N+G K VRRIHRALDSDDVELV++LL E + LDDA AL
Sbjct: 296 EIRQK----SQPNEGDTVISDPVHEKRVRRIHRALDSDDVELVKLLLNESEITLDDANAL 351
Query: 304 HYAVEHCDSKITTELLDLALADVNHRNPRGYTVLHIAARRREPKIIVSLLTKGARPADVT 363
HYA +CDSK+ +ELLDL LA++N +N RGYT LH+AA RREP II+ LL KGA + +T
Sbjct: 352 HYAAAYCDSKVVSELLDLRLANLNLKNSRGYTALHLAAMRREPAIIMCLLNKGAAVSQLT 411
Query: 364 FDGRKAVQISKRLTKQGDYFGVTEEGKPSPKDRLCIEILEQAERRDPQLGEASVSLAMAG 423
DG+ A+ I +RLT+ DY E+G+ S KDRLCI+IL++ R P E SV+ +
Sbjct: 412 ADGQSAMSICRRLTRMKDYNTKMEQGQESNKDRLCIDILDREMIRKPMAVEDSVTSPLLA 471
Query: 424 ESLRGRLLYLENRVALARIMFPMEARVAMDIAQVDGTLEFNLGSGANPPPERQRTTVDLN 483
+ L +LLYLENRVA AR+ FP EA+VAM IAQ D T EF + A+ + + VDLN
Sbjct: 472 DDLHMKLLYLENRVAFARLFFPAEAKVAMQIAQADTTPEFGIVPAASTSGKLKE--VDLN 529
Query: 484 ESPFIMKEEHLARMTALSKTVELGKRFFPRCSNVLDKIMDDE----TDPVSLGRDTSAE- 538
E+P + +R+ AL KTVELG+R+FP CS VLDK ++D+ D + L TS E
Sbjct: 530 ETPVTQNKRLRSRVDALMKTVELGRRYFPNCSQVLDKFLEDDLPDSPDALDLQNGTSDEQ 589
Query: 539 --KRKRFHDLQDVLQKAFHEDKEEN 561
KR RF +L++ ++KAF +D+ +N
Sbjct: 590 NVKRMRFCELKEDVRKAFSKDRADN 614
>Os03g0667100 BTB domain containing protein
Length = 573
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 199/442 (45%), Positives = 278/442 (62%), Gaps = 23/442 (5%)
Query: 131 VLDYLYSGRVGDLPKAACLCVDEDCAHVGCHPAVAFMAQVLFAASTFQVAELTNLFQRRL 190
VL YLY+GR+ P A C+D+ C+H C PA+ F+ + +AAS FQ++EL +LFQRRL
Sbjct: 124 VLSYLYTGRLRSAPPEAAACLDDGCSHDACRPAIDFVVESTYAASGFQISELVSLFQRRL 183
Query: 191 LDVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKSLPPDVIKQII 250
D ++K +++L IL VA+ C+ +LL +C+ V SNLD LEK LP D+ ++
Sbjct: 184 SDFVNKALAEDILPILVVASTCHLP--ELLNQCIQRVANSNLDNRYLEKRLPDDLYAKLK 241
Query: 251 DARL----SLGLISPENKGFPNKHVRRIHRALDSDDVELVRMLLTEGQTNLDDAFALHYA 306
+ R+ G++ PE++ K VR IH+ALDSDDV+LV MLL E LDDAFA+HYA
Sbjct: 242 EFRVPDEPHSGILDPEHE----KRVRNIHKALDSDDVDLVGMLLKESPVTLDDAFAIHYA 297
Query: 307 VEHCDSKITTELLDLALADVNHRNPRGYTVLHIAARRREPKIIVSLLTKGARPADVTFDG 366
+C+ K+ ELL L A+VN +N GYT LH+A RREP IIVSL+ KGA + T DG
Sbjct: 298 AAYCEPKVLAELLKLESANVNLKNSSGYTPLHMACMRREPDIIVSLIEKGASVLERTQDG 357
Query: 367 RKAVQISKRLTKQGDYFGVTEEGKPSPKDRLCIEILEQAERRDPQL------GEASVSLA 420
R A+ I KRLT++ D +E+ K K LCI +L+Q +R PQ+ E S++
Sbjct: 358 RDALTICKRLTREKDRNEKSEKCKERSKAYLCIGVLQQEIKRRPQILEDQMSAEESIATP 417
Query: 421 MAGESLRGRLLYLENRVALARIMFPMEARVAMDIAQVDGTLEFNLGSGANPPPERQRTTV 480
+ ++ RLL LENRVA ARI FP EA++ M IAQ D T EF + AN ++ V
Sbjct: 418 LLVDNFHMRLLNLENRVAFARIFFPSEAKLVMRIAQADSTQEFAGLTSANFSKLKE---V 474
Query: 481 DLNESPFIMKEEHLARMTALSKTVELGKRFFPRCSNVLDKIMDDETDPVSLGRDTSAE-- 538
DLNE+P + R+ AL+KTVELG+R+FP CS VLDK +++E+ + L +AE
Sbjct: 475 DLNETPTMQNRRLRERLDALTKTVELGRRYFPHCSEVLDKFLNEESTDLILLESGTAEDQ 534
Query: 539 --KRKRFHDLQDVLQKAFHEDK 558
KR RF +L++ ++KAF +DK
Sbjct: 535 QTKRMRFSELREDVRKAFTKDK 556
>Os11g0141900 BTB domain containing protein
Length = 494
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 152/302 (50%), Gaps = 30/302 (9%)
Query: 130 LVLDYLYSGRVG-DLPKAACL--CVDEDCAHVGCHPAVAFMAQVLFAASTFQVAELTNLF 186
LVL +LYSG+ PK+ L C C H C AV L AA +F V +L L
Sbjct: 116 LVLQFLYSGQASVAAPKSGPLPGCGARGCWHTRCGAAVDLALDTLAAARSFGVEQLALLV 175
Query: 187 QRRLLDVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKSLPPDVI 246
Q++L ++ + VD+++ +L + +L C +V RS L L K LP DV+
Sbjct: 176 QKQLESMVKEASVDDVMKVLMASR--KFEMQELWATCSHLVARSGLSADLLAKHLPIDVV 233
Query: 247 KQI--IDARLSLGLISPENKGFPNKH----------------VRRIHRALDSDDVELVRM 288
+I I A+ L ++ F H +RR+ RALD+ D+ELV++
Sbjct: 234 AKIEEIRAKSPLAAVAAPRSPFLTHHYLPMNPASSAADRDNKIRRMRRALDAADIELVKL 293
Query: 289 LLTEGQTNLDDAFALHYAVEHCDSKITTELLDLALADVNHR-NPRGYTVLHIAARRREPK 347
++ +LDDA A+HYAV+HC+ + LL+L ADVN R P G T LH+AA P
Sbjct: 294 MVMGEGLDLDDALAVHYAVQHCNRDVVKALLELGAADVNSRAGPTGKTALHLAAEMVSPD 353
Query: 348 IIVSLLTKGARPADVTFDGRKAVQISKRLTKQ----GDYFGVTEEGKPSPKDRLCIEILE 403
++ LL A P T DG + + + LT + G G+T +P+ K RLC+E+++
Sbjct: 354 MVSVLLDHHADPNSRTLDGVTPLDVLRSLTSEFLFKGAVPGLTHI-EPN-KLRLCLELVQ 411
Query: 404 QA 405
A
Sbjct: 412 SA 413
>Os01g0948900 Ankyrin repeat containing protein
Length = 337
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 135/269 (50%), Gaps = 35/269 (13%)
Query: 187 QRRLLDVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKSLPPDVI 246
Q++L +++K +++++ +L + + +L C +V +S L L K LP DV+
Sbjct: 8 QKQLAGMVEKASIEDVMKVLMASR--KQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVV 65
Query: 247 KQIIDARLS--------------------LGLISPENKGFPNKH-VRRIHRALDSDDVEL 285
+I + RL G+ + + H +RR+ RALDS DVEL
Sbjct: 66 AKIDELRLKSMSRRSPFLSHHHHHPHAAAAGIEASSAAELDDHHKIRRMRRALDSSDVEL 125
Query: 286 VRMLLTEGQTNLDDAFALHYAVEHCDSKITTELLDLALADVNH-RNPRGYTVLHIAARRR 344
V++++ NLDDA ALHYAVE+C ++ LL+L ADVNH P G T LH+AA
Sbjct: 126 VKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMV 185
Query: 345 EPKIIVSLLTKGARPADVTFDGRKAVQISKRLTKQGDYFGVT---EEGKPSPKDRLCIEI 401
P ++ LL A P T DG + I + LT + G +P+ K RLC+E+
Sbjct: 186 CPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPN-KLRLCLEL 244
Query: 402 LEQA----ERRDPQLGEASVSLA-MAGES 425
++ A R D Q A+V+ A + GES
Sbjct: 245 VQSAAMVMSREDAQ--TAAVNAAPIYGES 271
>Os12g0138500 Ankyrin repeat containing protein
Length = 312
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 108/211 (51%), Gaps = 25/211 (11%)
Query: 218 KLLERCLDMVVRSNLDMITLEKSLPPDVIKQI--IDARLSLGLISPENKGFPNKH----- 270
+L C +V RS L L K LP DV+ +I I A+ L + F H
Sbjct: 24 ELWATCSHLVARSGLSADLLAKHLPIDVVAKIEEIRAKSPLAAAAAPRSPFLTHHYLPMN 83
Query: 271 -----------VRRIHRALDSDDVELVRMLLTEGQTNLDDAFALHYAVEHCDSKITTELL 319
+RR+ RALD+ D+ELV++++ +LDDA A+HYAV+HC+ + LL
Sbjct: 84 PASSAADRDNKIRRMRRALDAADIELVKLMVMGEGLDLDDALAVHYAVQHCNRDVVKALL 143
Query: 320 DLALADVNHR-NPRGYTVLHIAARRREPKIIVSLLTKGARPADVTFDGRKAVQISKRLTK 378
+L ADVN R P G T LH+AA P ++ LL A P T DG + + + LT
Sbjct: 144 ELGAADVNSRAGPTGKTALHLAAEMVSPDMVSVLLDHHADPNSRTLDGVTPLDVLRSLTS 203
Query: 379 Q----GDYFGVTEEGKPSPKDRLCIEILEQA 405
+ G G+T +P+ K RLC+E+++ A
Sbjct: 204 EFLFKGAVPGLTHI-EPN-KLRLCLELVQSA 232
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,764,932
Number of extensions: 645142
Number of successful extensions: 1745
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1736
Number of HSP's successfully gapped: 7
Length of query: 582
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 476
Effective length of database: 11,501,117
Effective search space: 5474531692
Effective search space used: 5474531692
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)