BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0154600 Os01g0154600|AK106595
(241 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0154600 Conserved hypothetical protein 461 e-130
Os01g0154500 Conserved hypothetical protein 352 2e-97
Os01g0154300 Conserved hypothetical protein 308 3e-84
Os01g0153500 Protein of unknown function DUF674 family protein 153 1e-37
Os01g0153900 145 2e-35
Os01g0154100 137 8e-33
Os01g0153600 130 7e-31
Os01g0154200 127 6e-30
Os05g0115600 Protein of unknown function DUF674 family protein 108 4e-24
Os04g0594500 Protein of unknown function DUF674 family protein 72 4e-13
Os01g0153950 67 1e-11
>Os01g0154600 Conserved hypothetical protein
Length = 241
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/241 (95%), Positives = 230/241 (95%)
Query: 1 MAAIRLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVL 60
MAAIRLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVL
Sbjct: 1 MAAIRLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVL 60
Query: 61 DSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASFFTCEGKSTVVSY 120
DSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASFFTCEGKSTVVSY
Sbjct: 61 DSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASFFTCEGKSTVVSY 120
Query: 121 STTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVGFVVGTATYTVRDDLSMTPXXXXXX 180
STTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVGFVVGTATYTVRDDLSMTP
Sbjct: 121 STTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVGFVVGTATYTVRDDLSMTPASSVSS 180
Query: 181 XXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLPKRKVSCKREASGL 240
QCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLPKRKVSCKREASGL
Sbjct: 181 VSLLAQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLPKRKVSCKREASGL 240
Query: 241 L 241
L
Sbjct: 241 L 241
>Os01g0154500 Conserved hypothetical protein
Length = 238
Score = 352 bits (902), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 168/239 (70%), Positives = 194/239 (81%), Gaps = 1/239 (0%)
Query: 1 MAAIRLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVL 60
MA LS+KLLIDTKAQKVCFAEAG+DV+EF++ LLCLPMSTIIN+LTKERMVGSMGNVL
Sbjct: 1 MAMKTLSIKLLIDTKAQKVCFAEAGNDVVEFLASLLCLPMSTIINLLTKERMVGSMGNVL 60
Query: 61 DSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASFFTCEGKSTVVSY 120
DS+EKL+ K+V ++QSK+R+LSPT AP LCPLQQLL D +LN N SFFTCEGK SY
Sbjct: 61 DSMEKLEDKHVTTNQSKQRYLSPTAAPNALCPLQQLL-DTELNANTSFFTCEGKLNSTSY 119
Query: 121 STTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVGFVVGTATYTVRDDLSMTPXXXXXX 180
+ T+ CGYFSV KG++CP+C T MH+AIPHV T + GT TYT++DDLSMTP
Sbjct: 120 NATRFACGYFSVVKGSICPLCYTPMHKAIPHVNTSRVMAGTGTYTIKDDLSMTPASSVSS 179
Query: 181 XXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLPKRKVSCKREASG 239
QCGVKDL+ LQERT+KIGKEE LEILLASLKSKTVLTDVFLPK+K SCKRE S
Sbjct: 180 ISLLAQCGVKDLTTLQERTMKIGKEEALEILLASLKSKTVLTDVFLPKKKESCKREVSA 238
>Os01g0154300 Conserved hypothetical protein
Length = 251
Score = 308 bits (788), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 151/230 (65%), Positives = 179/230 (77%), Gaps = 3/230 (1%)
Query: 1 MAAIRLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVL 60
MAA LS+KL+IDTKA KVCFAEAGSD +EF+S LLCLP+S IIN+LTKE MVGS+ NV
Sbjct: 1 MAAAELSIKLVIDTKAHKVCFAEAGSDFVEFLSSLLCLPVSNIINLLTKEHMVGSIANVF 60
Query: 61 DSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASFFTCEGKSTVVSY 120
DSVEKLD+ +VIS++SKE +L P VAP LCPLQQL+ DA+L+ + SFFTCEGK + Y
Sbjct: 61 DSVEKLDADHVISNESKEPYLKPMVAPGALCPLQQLI-DAQLDTDTSFFTCEGK--LNHY 117
Query: 121 STTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVGFVVGTATYTVRDDLSMTPXXXXXX 180
+V CGYF+V KG++CP C M +A+ HVK GFVVGTA YTV+DDLS+ P
Sbjct: 118 HGIRVACGYFTVMKGSICPKCGYAMEKAMAHVKATGFVVGTARYTVKDDLSIVPASSVST 177
Query: 181 XXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLPKRK 230
QCGVKDLS LQERTVKIGKEE LEILLASL++KTVLTDVFL K+K
Sbjct: 178 ISLLAQCGVKDLSTLQERTVKIGKEEALEILLASLRTKTVLTDVFLLKKK 227
>Os01g0153500 Protein of unknown function DUF674 family protein
Length = 243
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 128/242 (52%), Gaps = 29/242 (11%)
Query: 6 LSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVLDSVEK 65
LSMKLL+DT AQ+V FAEA DV++F+ LL LP+ T + +L K+ MVG +GN+ SVEK
Sbjct: 8 LSMKLLVDTNAQRVLFAEASKDVVDFLFSLLALPVGTAVKLLGKDSMVGCVGNLYASVEK 67
Query: 66 LDSKYVISSQSKERFLSPTV-APTVLCPLQQLLLDAKLNVNA-SFFTCEGKSTVVSYSTT 123
LD YV SK LSP V +P L L A + SFF+C SY
Sbjct: 68 LDGTYVQPGASKNALLSPVVLSPAASSNTSVLRLPAPSSSQPKSFFSCR------SYD-- 119
Query: 124 KVPCGYFSVS-KGAVCPVCSTQMHRAIPHVK---------------TVGFVVGTATYTVR 167
C Y+ G CP C QM A + GFV G TYTV
Sbjct: 120 ---CFYYVTDVSGVKCPSCGNQMTTACTYAAPTAAQKLQAAAAEGAGKGFVQGIVTYTVM 176
Query: 168 DDLSMTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLP 227
DDL+++P VKDL AL+E+TV++G E L IL ASL+SKTVL+DVFL
Sbjct: 177 DDLTVSPMSSISSITLLNTFAVKDLGALKEQTVQLGYTEGLAILRASLQSKTVLSDVFLA 236
Query: 228 KR 229
+R
Sbjct: 237 RR 238
>Os01g0153900
Length = 252
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 131/241 (54%), Gaps = 29/241 (12%)
Query: 6 LSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVLDSVEK 65
+SM LLIDTKAQ+V +AEA DV++F+ LL LP+++ I +L K MVG +GN+ S EK
Sbjct: 15 MSMTLLIDTKAQRVLYAEARKDVVDFLLSLLALPIASGIKLLGKGSMVGCVGNLYASFEK 74
Query: 66 LDSKYVISSQSKERFLSPTV-APTVLCPLQQLLLDAKLNVNA--SFFTCEGKSTVVSYST 122
LD +V + +K+ LSP V +P L L A + + SFF C SYS+
Sbjct: 75 LDDAFVQADTAKDSLLSPVVLSPAASSNTSVLRLPAPSSAQSSKSFFRC-------SYSS 127
Query: 123 TKVPCGYF-SVSKGAVCPVCSTQMHRAIPHVK----------------TVGFVVGTATYT 165
C F + + G CP C QM A +V GFV G TYT
Sbjct: 128 NA--CRSFVTNASGTKCPNCGNQMATACTYVAGGQDQNTQNAAAEGAKGGGFVQGIVTYT 185
Query: 166 VRDDLSMTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVF 225
V DDL++ P + VKDL AL+E+TV++G E L IL ASL+SKTVLTDVF
Sbjct: 186 VMDDLTVAPMSSISSITLLNRFAVKDLGALKEKTVQLGYTEGLAILKASLQSKTVLTDVF 245
Query: 226 L 226
+
Sbjct: 246 I 246
>Os01g0154100
Length = 254
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 128/251 (50%), Gaps = 35/251 (13%)
Query: 6 LSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVLDSVEK 65
LSMKLL+D+KAQ+V +AEAG DV++F+ LL LP+ T++ +L+K+ MVGS+G + SVE
Sbjct: 11 LSMKLLVDSKAQRVLYAEAGKDVVDFLFSLLTLPVGTVVKVLSKDSMVGSIGELYASVED 70
Query: 66 LDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASFFTCEGKSTVVSYSTTKV 125
LD+ YV S+ ++ L+P LQ L + + + C Y
Sbjct: 71 LDATYVRSADARNVLLAPAGGFDTGKLLQ--LPETAAPLATKLYRCSSCDYNECYD---- 124
Query: 126 PCGYFSVSKGAVCPV--CSTQMHRAIP------------------------HVKTVGFVV 159
Y S G C + C +M A+ V GFV
Sbjct: 125 ---YVSTVSGLRCQIARCPGKMTVAMKLVVSSTSTTATGSASGGEAAQPAYAVAGTGFVQ 181
Query: 160 GTATYTVRDDLSMTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKT 219
G TYT+ DDL + P GV D+++LQE+TV+IG E L +L ASL+SKT
Sbjct: 182 GVVTYTIMDDLRVAPMSTISGITLLTTFGVTDITSLQEKTVQIGYTEGLAMLKASLQSKT 241
Query: 220 VLTDVFLPKRK 230
VLTDVFL K++
Sbjct: 242 VLTDVFLGKKR 252
>Os01g0153600
Length = 308
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 125/248 (50%), Gaps = 32/248 (12%)
Query: 7 SMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVLDSVEKL 66
++KLLI +AQ V FAEAG DV++F+ LL +P+ ++ +L E +G + NV SV ++
Sbjct: 23 TIKLLIAKEAQVVLFAEAGKDVVDFLVGLLAMPVGAVVKLLAGENALGGVANVYASVRRM 82
Query: 67 DSKYVISSQSKERFLSPTVA-----------------PTVLCPLQQLLLDAKLNVNASFF 109
D+ Y+ S+++++ L+P A P V P +
Sbjct: 83 DAAYMQSAEARDALLNPAPAHPCLAATAGGFPSLVQPPRVQAPYVAPPPPPPPPPGHPAY 142
Query: 110 TCEG-KSTVVSYSTTKV---PCGY-FSVSKGAVCPVC--STQMHRAIPHVKTVGFVVGTA 162
C + T S + K P G S G C C + Q + GFV
Sbjct: 143 QCSTIRPTTPSLPSLKAAFPPFGAGMSSDTGCRCSTCLAAAQTGK--------GFVRDVV 194
Query: 163 TYTVRDDLSMTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLT 222
TYTV DDL+ P + GV+DLSAL+E+TVKIG +E LEIL ASL+SKTVLT
Sbjct: 195 TYTVMDDLTFMPMSSISSIALLSKLGVEDLSALEEKTVKIGYQEGLEILKASLQSKTVLT 254
Query: 223 DVFLPKRK 230
DVFL ++K
Sbjct: 255 DVFLNRKK 262
>Os01g0154200
Length = 259
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 131/262 (50%), Gaps = 42/262 (16%)
Query: 3 AIRLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVLDS 62
A L+MKLL+DTKAQ+V +AE DV++F+ LL +P++ + +LT MVGS+GN+ S
Sbjct: 8 AATLTMKLLVDTKAQRVLYAEGSKDVVDFLLSLLAVPLAGVTKLLTAGDMVGSVGNLYGS 67
Query: 63 V-EKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASFFTCEGKSTVVS-Y 120
V +KL + Y K L+PT A + P DA N + + C G + S Y
Sbjct: 68 VVDKLGADYACRGDVKAALLAPTAALRLGSPA-----DAD-NGGGALYRCSGCACSRSCY 121
Query: 121 S-TTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVK-------------------------T 154
+ TKV G CPVC +M + V+
Sbjct: 122 NFVTKV--------NGTPCPVCKRKMATEVSLVEPDDVSGAGAKVVTSPAAPSGEASSSK 173
Query: 155 VGFVVGTATYTVRDDLSMTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLAS 214
G+ G TYTV DDL++ P GV D+ LQE+TV++G +E L +L AS
Sbjct: 174 AGYAPGKVTYTVMDDLTVAPSSTVSAVAALVALGVTDIRGLQEKTVEVGYDEGLAVLKAS 233
Query: 215 LKSKTVLTDVFLPKRKVSCKRE 236
L+SKTVLTDVFL R+ + +R
Sbjct: 234 LQSKTVLTDVFLGARRTAHRRH 255
>Os05g0115600 Protein of unknown function DUF674 family protein
Length = 243
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 44/254 (17%)
Query: 5 RLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVLDSVE 64
++S+KLL+D+K++KV FAEAG + ++F+ LL LP+ ++ +++ M GS+G + SVE
Sbjct: 6 KISLKLLVDSKSKKVLFAEAGKEFVDFVFSLLTLPVGAVVKLISAGTMQGSIGRLYQSVE 65
Query: 65 KLDSKYVISSQSKERFLSPTVAPTVLCP-LQQLLLDAKLNVNAS--------FFTCEGKS 115
+++ Y++ ++ + L P VL P ++LLL + A +TC G
Sbjct: 66 HINASYLLPNKDRADLLQ----PKVLHPDARELLLLQPESGGAGGSPLARFKLYTCAGHC 121
Query: 116 TVVSYSTTKVPCGYFSVSKGAVCPVCSTQMHRAIPHV-------------------KTVG 156
T + A CP C M + V ++ G
Sbjct: 122 TTAAMEAK------------AACPQCKQAMDTEVALVLPSASSPAQSSAAASGGDGESSG 169
Query: 157 FVVGTATYTVRDDLSMTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLK 216
+V G TY V D L +TP + V L E+ V I +E L IL A+L+
Sbjct: 170 YVKGLVTYMVTDGLEVTPMSAISSITLINKFSVGKDVELAEKYVSIAMDEGLGILKAALR 229
Query: 217 SKTVLTDVFLPKRK 230
S TVL+DVFL K+K
Sbjct: 230 SDTVLSDVFLAKKK 243
>Os04g0594500 Protein of unknown function DUF674 family protein
Length = 403
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 6 LSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVLDSVEK 65
+++KL +D + +V FAE+ D ++ + L LP+ T++ +L ++ VG + + SVE
Sbjct: 11 IAVKLFVDKERSRVLFAESDKDFVDVLFGFLTLPLGTVVRLLGRQSQVGCLDELYKSVED 70
Query: 66 LDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASFFTCEGKSTVVSYSTTKV 125
L + Y + K + P C L ++ +D ++ + C + +
Sbjct: 71 LSADYFHTKACKAMLMKPHNTAAEQCCLLKVKVDD--TDQSAVYVCRDANC-----SANG 123
Query: 126 PCGYFSVSKGAVCPVCSTQMHRAIPHVKTVG-----------FVVGTATYTVRDDLSMTP 174
CG SV+ G+VC C M + G FV G + V DDL + P
Sbjct: 124 DCGVTSVA-GSVCK-CGKVMEYIGEWPQDGGSTAAAGSDGGVFVKGCYKFIVTDDLHVAP 181
Query: 175 XXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFL 226
+ GV+D + L+++ +++ E++ +L SL SK LT +
Sbjct: 182 ASTSLMMSIFDKYGVRDPANLEQKILQLNAEKITCLLKRSLTSKQTLTGYYF 233
>Os01g0153950
Length = 129
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 156 GFVVGTATYTVRDDLSMTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASL 215
GFV G TY V DDL + P + GV + +LQE+TV+IG E L +L ASL
Sbjct: 37 GFVQGLVTYAVMDDLKVAPMSTIALV----KSGVTHIKSLQEKTVQIGYTEGLAMLKASL 92
Query: 216 KSKTVLTDVFLPKRK 230
+SKTVLTDVFL K++
Sbjct: 93 QSKTVLTDVFLGKKR 107
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,335,494
Number of extensions: 208752
Number of successful extensions: 490
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 478
Number of HSP's successfully gapped: 12
Length of query: 241
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 143
Effective length of database: 11,918,829
Effective search space: 1704392547
Effective search space used: 1704392547
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)