Os01g0154600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0154600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.55 | 0.501 | 8.81 | -1.38 | 1.22 | 3.63 | 0.24 | -4.31 | -0.117 | 6.55 | 13.74 | 1291 | -- | -- |
| 129.28 | 0.53 | 8.69 | -0.444 | 1.19 | 3.59 | 0.109 | -- | 0.112 | 6.6 | 14.6 | 1297 | -- | -- |
| 113.69 | 0.497 | 8.81 | -1.37 | 1.22 | 3.63 | -- | -4.29 | -0.116 | 6.57 | 13.77 | 1287 | -- | -- |
| 129.21 | 0.529 | 8.69 | -0.442 | 1.21 | 3.57 | -- | -- | 0.137 | 6.56 | 14.51 | 1297 | -- | -- |
| 190.64 | 0.643 | 8.84 | -1.37 | -- | 3.74 | -- | -4.18 | -0.111 | -- | 5.282 | 1323 | -- | -- |
| 340.58 | 0.865 | 8.55 | 0.655 | 1.37 | -- | 0.0247 | -- | 0.772 | 5.7 | -- | -- | -- | -- |
| 340.59 | 0.864 | 8.55 | 0.655 | 1.37 | -- | -- | -- | 0.772 | 5.7 | -- | -- | -- | -- |
| 205.38 | 0.667 | 8.72 | -0.458 | -- | 3.69 | -- | -- | 0.131 | -- | 2.239 | 1330 | -- | -- |
| 133.73 | 0.539 | 8.68 | -- | 1.25 | 3.41 | -- | -- | 0.189 | 6.54 | 14.5 | 1287 | -- | -- |
| 438.52 | 0.979 | 8.57 | 0.699 | -- | -- | -- | -- | 0.805 | -- | -- | -- | -- | -- |
| 351.91 | 0.878 | 8.56 | -- | 1.38 | -- | -- | -- | 0.699 | 5.68 | -- | -- | -- | -- |
| 210.18 | 0.675 | 8.7 | -- | -- | 3.5 | -- | -- | 0.21 | -- | 5.518 | 1325 | -- | -- |
| 451.4 | 0.992 | 8.59 | -- | -- | -- | -- | -- | 0.727 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 10 | 114.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 22 |
| 14 | 114.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 22 |
| 25 | 114.83 | temperature | 15 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 42 | 114.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 60 | 114.97 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 159 | 115.56 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 183 | 115.72 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 210 | 115.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 13 |
| 382 | 117.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 21 |
| 445 | 118.05 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 452 | 118.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 460 | 118.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 500 | 118.56 | temperature | 15 | 1440 | > th | dose dependent | sin | 15 | NA |
| 587 | 119.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 589 | 119.13 | temperature | 30 | 1440 | < th | dose dependent | sin | 4 | NA |
| 773 | 120.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 786 | 120.53 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 807 | 120.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 939 | 121.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 3 |