BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0154600 Os01g0154600|AK106595
(241 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09110.1 | chr3:2794850-2795963 REVERSE LENGTH=344 84 6e-17
AT3G09120.1 | chr3:2797556-2798588 REVERSE LENGTH=315 75 4e-14
AT5G01150.1 | chr5:51988-53649 FORWARD LENGTH=502 72 3e-13
AT5G01130.1 | chr5:47642-49174 FORWARD LENGTH=453 67 6e-12
AT5G01120.1 | chr5:45281-46986 FORWARD LENGTH=511 59 2e-09
AT3G09140.1 | chr3:2801094-2802773 REVERSE LENGTH=531 56 2e-08
AT5G43240.1 | chr5:17353077-17354765 REVERSE LENGTH=513 55 4e-08
AT5G01140.1 | chr5:49891-51437 FORWARD LENGTH=474 49 3e-06
>AT3G09110.1 | chr3:2794850-2795963 REVERSE LENGTH=344
Length = 343
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 25/244 (10%)
Query: 5 RLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKER-----MVGSMGNV 59
+ S++LLID + +V AEAG D ++ + LL LPM TI+ +L K + +VG + N+
Sbjct: 9 KFSLRLLIDEEKNRVILAEAGKDFVDVLCSLLTLPMGTIVRLLEKHQNPQSSVVGCLHNL 68
Query: 60 LDSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNAS----FFTCEGKS 115
SV +D S K L P A D KLN++ + FF C
Sbjct: 69 YKSVADMDVDNFESQACKHFLLHPRSAKG------SHGRDLKLNIDDTEATKFFVCP--- 119
Query: 116 TVVSYSTTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVG---FVVGTATYTVRDDLSM 172
++ +T+ FS C C + MHR IP + F ++ + DDL +
Sbjct: 120 ---NFVSTEACRKLFSNVSTMKCR-CGSSMHREIPVEEQQADGVFPSCRTSFVITDDLKV 175
Query: 173 TPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLPKRKVS 232
G LQE + +G EE+L +L S+ LTD FL K +S
Sbjct: 176 ALNSMGLVLNVLNDFGYSGFDKLQEMLIDVGFEEILTLLGCLFTSEAPLTDTFLRKHCMS 235
Query: 233 CKRE 236
KR+
Sbjct: 236 RKRK 239
>AT3G09120.1 | chr3:2797556-2798588 REVERSE LENGTH=315
Length = 314
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 15/235 (6%)
Query: 5 RLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKE----RMVGSMGNVL 60
++S+KLL+D K KV AEAG D ++ + LL PM TI +L K +++G N+
Sbjct: 6 KISLKLLVDEKKNKVVLAEAGQDFVDVLFGLLTFPMGTIARLLEKHQKLPQILGCYKNLS 65
Query: 61 DSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNAS-FFTCEGK----- 114
SV + + K LSP + + C +L +D + A+ F+ C K
Sbjct: 66 RSVSDMAVDDFKTEACKSMLLSPKSSMEIHCRRLKLHID---DTQATMFYVCSKKHESDS 122
Query: 115 STVVSYSTTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVGFVVGTATYTVRDDLSMTP 174
S ++ ++ CG + + V Q+ ++ + + V FV +++ + DDL +
Sbjct: 123 SKYSNFYKSRCSCGSLMIYQIHVPE--DEQVVDSLGNAEDVVFVSCRSSFILTDDLKVML 180
Query: 175 XXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLPKR 229
G +++ L+E + +G EEVL +L S++ LT FL K+
Sbjct: 181 NSIDEIVKVLNGLGYPNINDLKEMLIDVGSEEVLSLLGNLFTSESALTSTFLMKQ 235
>AT5G01150.1 | chr5:51988-53649 FORWARD LENGTH=502
Length = 501
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 18/235 (7%)
Query: 5 RLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKER-----MVGSMGNV 59
+ S++L++D + KV AEA D ++ + LL LPM TI+ +L R +G N+
Sbjct: 9 KFSLRLIVDEEKNKVVLAEACRDFVDVLFSLLTLPMGTIVRLLENHRKSEPVTLGCFNNL 68
Query: 60 LDSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASF----FTCEGKS 115
SV + S + K+ + P + C KLN+N + F C
Sbjct: 69 YRSVVDMGSDCFETEACKQMLVYPKSVKDLQCKR------LKLNINPTEDIKCFKCSSYC 122
Query: 116 TVVS-YSTTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVGFVVGTATYTVRDDLSMTP 174
+ S +ST+K CG F +++ + R V FV G ++ + DDL ++
Sbjct: 123 GLYSNFSTSKCRCGKF-MNEEIQLENEEQDLGRFQDDDNGV-FVSGRCSFVLTDDLEVSV 180
Query: 175 XXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLPKR 229
G D+ L ER + IG +EVL +L S L D+FL K+
Sbjct: 181 KSTELVLNKLKSLGCADVGKLGERLLDIGVKEVLTLLGCIFSSNAPLKDIFLNKK 235
>AT5G01130.1 | chr5:47642-49174 FORWARD LENGTH=453
Length = 452
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 24/234 (10%)
Query: 5 RLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKER-----MVGSMGNV 59
++S++L ID + KV AEA ++ + LL LPM TII +L + R VG N+
Sbjct: 9 KVSLRLFIDEEKNKVVLAEASKAFVDVLFSLLTLPMGTIIRLLEEHRESQPITVGCFSNL 68
Query: 60 LDSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNAS---FFTCEGKST 116
SV ++ + K L P + ++L+ LN+N + F C
Sbjct: 69 YRSVAEMGIDNFKTDVCKHILLHPRSVRDL--QYKRLM----LNINPTEVKLFKCPISCN 122
Query: 117 VVS-YSTTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVGFVVGTATYTVRDDLSMTPX 175
S +ST++ CG S++K P R +P ++ V + + DDL +
Sbjct: 123 FYSHFSTSRCQCGS-SMNKEFQEP-------RVVPVASSIQNDVN-GVFIITDDLKVAVR 173
Query: 176 XXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLPKR 229
G D+S L+E V IG EEVL +L SK LT+ FL K+
Sbjct: 174 STDVVLNELKSLGSGDISKLREMLVYIGFEEVLTLLECMFSSKAPLTNTFLNKQ 227
>AT5G01120.1 | chr5:45281-46986 FORWARD LENGTH=511
Length = 510
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 34/244 (13%)
Query: 6 LSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINML-----TKERMVGSMGNVL 60
+++KLLID + KV FAEAG+D ++ + LPM TI+ +L ++ +G N+
Sbjct: 10 INLKLLIDEEKNKVVFAEAGTDFVDILFSFSTLPMGTIVRLLEMHHKSRSIAIGCFNNIY 69
Query: 61 DSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLD---AKLNVNASFFTCEGKST- 116
SV + K+ + K+ L P C +L +D A F G+ +
Sbjct: 70 ASVVSMGMKHFSTQACKQMLLFPGSLNQDKCQNMKLKIDDSEATKCFMCPMFVRSGQCSK 129
Query: 117 -VVSYSTTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVG---------FVVGTAT-YT 165
++ T++ CG F M I G FV G T +
Sbjct: 130 GYSNFKTSRCSCGNF--------------MDEVIQFQGEGGRGNGSQAEVFVRGAHTSFI 175
Query: 166 VRDDLSMTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVF 225
+ DDL + D L E +++ +EV +L+ S T LTD F
Sbjct: 176 ITDDLKVQVNSVGSTLNVLKDLAYADCDKLVEMILEVNLQEVATLLVCLFTSDTPLTDTF 235
Query: 226 LPKR 229
L K+
Sbjct: 236 LKKK 239
>AT3G09140.1 | chr3:2801094-2802773 REVERSE LENGTH=531
Length = 530
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 31/228 (13%)
Query: 5 RLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERM-----VGSMGNV 59
+LS++LLID KV AE+G D ++ + L LPM TI+ +L K + +G N+
Sbjct: 9 KLSVRLLIDELKNKVVLAESGKDFVDVLFSFLALPMGTIVRLLEKHQKSPQVGIGCFNNL 68
Query: 60 LDSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASFFTCEG--KSTV 117
SV ++D + + K+ L P L + + L +F C G +S
Sbjct: 69 YKSVSEMDLESFQTEACKQVLLYPRSVN--LEKFRNMKLKIDDTRAVKYFVCSGFKESCR 126
Query: 118 VSYS---TTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKT--------------VGFVVG 160
YS T + CG SK V M+R I ++ V F
Sbjct: 127 HHYSISNTEECECGEIVDSK-----VVKRVMNREIKGLEEEQVQGRILRKDNDGVFFSCK 181
Query: 161 TATYTVRDDLSMTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVL 208
+++ + DDL + G D S L E + +G EV
Sbjct: 182 ASSFIITDDLKVEASSMDNVLNTLRGLGYADTSKLSEILLHVGVSEVF 229
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 6 LSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKERMVGSMGNVLDSVEK 65
++ K + K+ E G+D I+ + L LP+ ++ N+ +G +GN+ S ++
Sbjct: 307 ITFKAFVRKPNIKILCVECGADFIDLLFTFLALPLESVWNISAGNISLGCIGNLFRSFKR 366
Query: 66 LDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASF--FTC--EGKSTVVSYS 121
+D+ SS SK + P+ CP Q LLD + F C E +
Sbjct: 367 IDA----SSSSKTKL--PSFYS---CPKQ--LLDVVTEQQEIYCSFKCVVETNNEYDFKF 415
Query: 122 TTKVPCGYFSVSKGAVCPVCSTQMHRAIPHVKTVGFVVGTATYTVRDDLSMTPXXXXXXX 181
T K+P S+ + + + ++ ++ + GF+ + V DDL + P
Sbjct: 416 TRKMPPRPNSLKEKNQNMFFTNKT--SVLYLTSFGFMKQNTRFLVTDDLVIKPKNLVSNI 473
Query: 182 XXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFL 226
D ++E + IGK E + +L ASL + + LT F
Sbjct: 474 SLLKLNMHLDKEDVEEHVITIGKLEAISLLRASLMTSSALTSSFW 518
>AT5G43240.1 | chr5:17353077-17354765 REVERSE LENGTH=513
Length = 512
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 20/245 (8%)
Query: 6 LSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINML-----TKERMVGSMGNVL 60
+ +KLLID + KV F EAG D ++ + LPM TI+ +L +++ +G N+
Sbjct: 10 IKLKLLIDEEKNKVVFVEAGKDFVDLLFSFFTLPMGTIVRLLEMYKKSQKIAIGCFSNIY 69
Query: 61 DSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNASFFTC----EGKST 116
SV + ++ ++ K+ L P C +L +D + +F C E +
Sbjct: 70 ASVVSMGIEHFLTEACKQMLLYPGSLNHEKCRNLKLRVDD--SEATKYFVCPKFVEREQC 127
Query: 117 VVSYS---TTKVPCGYFSVSKGAVCPVCST-QMHRAIPHVKTVGFVVGTAT-YTVRDDLS 171
SYS T++ CG V V + + A V+ FV T + + DDL
Sbjct: 128 TESYSNFNTSRCSCG---VLMNEVTQLDGRGGLASAGNGVEGGVFVRSDHTSFMITDDLK 184
Query: 172 MTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFLPKR-K 230
+ G D L E+ + EEV +L S LTD FL K+
Sbjct: 185 VEITSVRLTLNVLKDLGYVDCEKLDEKIHDVNLEEVPTLLECLSTSDNPLTDTFLKKKSS 244
Query: 231 VSCKR 235
S KR
Sbjct: 245 YSTKR 249
>AT5G01140.1 | chr5:49891-51437 FORWARD LENGTH=474
Length = 473
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 54/250 (21%)
Query: 5 RLSMKLLIDTKAQKVCFAEAGSDVIEFISCLLCLPMSTIINMLTKER-----MVGSMGNV 59
+ S++L+ID + KV AEAG TI+ +L K R +G + N+
Sbjct: 9 KFSLRLIIDEEKNKVVLAEAG----------------TIVRLLAKHRKSDPVTIGCLRNL 52
Query: 60 LDSVEKLDSKYVISSQSKERFLSPTVAPTVLCPLQQLLLDAKLNVNAS-FFTCEGKSTVV 118
SV ++ + K+ L P + + KLN++ + C G
Sbjct: 53 YTSVVDMELDDFETDACKQMLLYPKNIR------EAQYRNFKLNIDTNESLKCFG----- 101
Query: 119 SYSTTKVPCGYFSVSK------GAVCPVCSTQMHRAIPHVKTVG------FVVGTATYTV 166
C +FS+ + ++C C M+ I ++ F+ +++ +
Sbjct: 102 --------CRFFSICRMCSNFNTSLCK-CGKLMNEEISFLEYEENDVEGVFMRDKSSFII 152
Query: 167 RDDLSMTPXXXXXXXXXXXQCGVKDLSALQERTVKIGKEEVLEILLASLKSKTVLTDVFL 226
DDL +T G D+S L+E+ + IG +EV+ ++ S T LTD FL
Sbjct: 153 TDDLRLTDDSTSSLLQTLKDLGCADVSKLREQVLDIGLKEVMTLMQCVFTSNTPLTDAFL 212
Query: 227 PKRKVSCKRE 236
+ + R+
Sbjct: 213 KNQSSNTVRK 222
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,290,653
Number of extensions: 151535
Number of successful extensions: 387
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 382
Number of HSP's successfully gapped: 9
Length of query: 241
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 145
Effective length of database: 8,474,633
Effective search space: 1228821785
Effective search space used: 1228821785
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)