BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0127600 Os01g0127600|AK102138
(179 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0127600 Similar to Bowman-Birk type proteinase inhibit... 330 4e-91
Os01g0124000 Similar to Bowman Birk trypsin inhibitor 135 1e-32
Os01g0124500 119 8e-28
Os01g0124400 Similar to Bowman Birk trypsin inhibitor 116 7e-27
Os01g0124100 Proteinase inhibitor I12, Bowman-Birk family p... 114 3e-26
Os01g0123900 Similar to Bowman-Birk type proteinase inhibit... 98 4e-21
>Os01g0127600 Similar to Bowman-Birk type proteinase inhibitor D-II precursor
(IV)
Length = 179
Score = 330 bits (845), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 166/179 (92%), Positives = 166/179 (92%)
Query: 1 MKSGSXXXXXXXXXXXXXIPISSAAVTPNSNIRLPTDGGDEWPSPPWDCCDKLKQSPLRI 60
MKSGS IPISSAAVTPNSNIRLPTDGGDEWPSPPWDCCDKLKQSPLRI
Sbjct: 1 MKSGSLLTLTLGALLLAGIPISSAAVTPNSNIRLPTDGGDEWPSPPWDCCDKLKQSPLRI 60
Query: 61 WPPKYKCLDEVDHCAAACEDCKRADGGGYVCRDWYWGVNPGPKCTGGGGEEAVRSRPWKC 120
WPPKYKCLDEVDHCAAACEDCKRADGGGYVCRDWYWGVNPGPKCTGGGGEEAVRSRPWKC
Sbjct: 61 WPPKYKCLDEVDHCAAACEDCKRADGGGYVCRDWYWGVNPGPKCTGGGGEEAVRSRPWKC 120
Query: 121 CDDAVCTRSMPPTCSCQDKVKSCSGGCGKCVQVESQPPRFRCLDRYHGFPGPKCHNQPA 179
CDDAVCTRSMPPTCSCQDKVKSCSGGCGKCVQVESQPPRFRCLDRYHGFPGPKCHNQPA
Sbjct: 121 CDDAVCTRSMPPTCSCQDKVKSCSGGCGKCVQVESQPPRFRCLDRYHGFPGPKCHNQPA 179
>Os01g0124000 Similar to Bowman Birk trypsin inhibitor
Length = 186
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 96/162 (59%), Gaps = 25/162 (15%)
Query: 29 NSNIRLP-------TDGGDEWPSPPWDCCDKLKQSPLRIWPPKYKCLDEVDHCAAACEDC 81
+SNIRLP TDG + S PW+CCD ++ S L+I+PP+++C DEV CAAACE+C
Sbjct: 33 DSNIRLPSNGAAGETDGNKQAKSRPWECCDNIEMSVLKIYPPRWRCNDEVKQCAAACENC 92
Query: 82 KRADGGG------YVCRDWYWGVNPGPKCTGGGGEEAVRSRPW-KCCDDAVCTRSMPPTC 134
+ G +VC DWY NPGP CT RPW CCD A CTRS+PP C
Sbjct: 93 LQLVPGAGGEDVVFVCDDWYPTTNPGPVCT---------PRPWGDCCDKAFCTRSLPPIC 143
Query: 135 SCQDKVKSCSGGCGKC--VQVESQPPRFRCLDRYHGFPGPKC 174
C D+V SC+ C +C V S+PPR+ C D + G PGP C
Sbjct: 144 HCADEVASCAAACKECDMVNSSSEPPRYICRDHFTGEPGPMC 185
>Os01g0124500
Length = 1131
Score = 119 bits (299), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 23/159 (14%)
Query: 30 SNIRLPTDGGDEWPSP----PWDCCDKLKQSPLRIWPPKYKCLDEVD--HCAAACEDCK- 82
+ IRLP+DG P PW CCD +++ P I+PP ++C DE++ CAA CE C+
Sbjct: 30 NTIRLPSDGAKSPKMPTEKRPWKCCDDIEEQPASIFPPFWRCNDELEPSQCAAQCEVCQD 89
Query: 83 -RADGGGYVCRDWYWGVNPGPKCTGGGGEEAVRSRPW-KCCDDAVCTRSMPPTCSCQDKV 140
A G +C D YWG +PGP CT RPW CCD +C+RS+PP C C D+V
Sbjct: 90 QEASPGRLICGDVYWGADPGPFCT---------PRPWGDCCDMDICSRSLPPICRCADEV 140
Query: 141 KSCSGGCGKCVQVE-----SQPPRFRCLDRYHGFPGPKC 174
+SC+ C C Q+E S+PPR+ C D + G PGP C
Sbjct: 141 ESCAAACKDCQQLESSSSSSEPPRYVCHDWFRGEPGPSC 179
>Os01g0124400 Similar to Bowman Birk trypsin inhibitor
Length = 251
Score = 116 bits (291), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 82/137 (59%), Gaps = 16/137 (11%)
Query: 46 PWDCCDKLKQSPLRIWPPKYKCLDEVD--HCAAACEDCKRADG---GGYVCRDWYWGVNP 100
PW CCD + Q P RI+PP ++C DE++ C AAC+ C+ A G G +C D YWG +P
Sbjct: 119 PWKCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPLICEDVYWGADP 178
Query: 101 GPKCTGGGGEEAVRSRPW-KCCDDAVCTRSMPPTCSCQDKVKSCSGGCGKCVQVE-SQPP 158
GP CT RPW KCCD A C + PPTC C D+V C+ C C +VE S+PP
Sbjct: 179 GPLCT---------PRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRVESSEPP 229
Query: 159 RFRCLDRYHGFPGPKCH 175
R+ C DR+ G PGP C
Sbjct: 230 RYVCKDRFTGQPGPMCK 246
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
Query: 29 NSNIRLPTDGGDEWPSPP--WDCCDKLKQSPLRIWPPKYKCLDEVDHCAAACEDCKRADG 86
++ IRLP+DG + P PP WDCCD ++ SPL I+PP Y+C DEV C+AAC++C A G
Sbjct: 27 DTMIRLPSDGAEAPPRPPKPWDCCDNIEMSPLEIFPPLYRCNDEVKQCSAACKECVEAPG 86
Query: 87 ----GGYVCRDWYWGVNPGPKCTGGGGEEAVRSRPWKCCDDAVCT--RSMPPTCSCQDKV 140
G +VCRDWY V+PG CT ++ RPWKCCD V R PP C D++
Sbjct: 87 DFPRGAFVCRDWYSTVDPGHMCT--APDQPTTKRPWKCCDSIVQLPQRIFPPFWRCDDEL 144
Query: 141 K--SCSGGCGKCVQVESQPP-RFRCLDRYHGF-PGPKCHNQP 178
+ C+ C C + P C D Y G PGP C +P
Sbjct: 145 EPGKCTAACKSCREAPGPFPGPLICEDVYWGADPGPLCTPRP 186
>Os01g0124100 Proteinase inhibitor I12, Bowman-Birk family protein
Length = 259
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 83/137 (60%), Gaps = 17/137 (12%)
Query: 46 PWDCCDKLKQSPLRIWPPKYKCLDEVD--HCAAACEDCKRADG---GGYVCRDWYWGVNP 100
PW CCD +++ P RI PP ++C DE+ C AAC+ C+ A G G +C D YWG +P
Sbjct: 126 PWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGPLICDDVYWGADP 185
Query: 101 GPKCTGGGGEEAVRSRPW-KCCDDAVCTRSMPPTCSCQDKVKSCSGGCGKC--VQVESQP 157
GP CT RPW CCD+ CT+S+PP CSC DKV +C G C C V S+P
Sbjct: 186 GPFCT---------PRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSEP 236
Query: 158 PRFRCLDRYHGFPGPKC 174
PRF C D++ G PGPKC
Sbjct: 237 PRFVCKDQFTGQPGPKC 253
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 19 IPISSAAVTPNSNIRLPTDG-GDEWPSPPWDCCDKLKQSPLRIWPPKYKCLDEVDHCAAA 77
+ + A IRLP++G P+ PWDCCD ++ SPL+I+PP Y+C DEV C+AA
Sbjct: 16 LAVGGLAAAHGDTIRLPSEGDAPPQPAKPWDCCDDIEMSPLKIFPPLYRCNDEVKQCSAA 75
Query: 78 CEDCKRA---------DGGGYVCRDWYWGVNPGPKCTGGGG--EEAVRSRPWKCCDDA-- 124
C++C A G VCRDWY +PG CT E + RPWKCCD+
Sbjct: 76 CKECVAAPAAGDSPCGGGAALVCRDWYSTEDPGKPCTPEREWPERTTKKRPWKCCDNIRR 135
Query: 125 VCTRSMPPTCSCQDKVK--SCSGGCGKCVQVESQ-PPRFRCLDRYHGF-PGPKCHNQP 178
+ R PP C D++K C C C + P C D Y G PGP C +P
Sbjct: 136 LPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGPLICDDVYWGADPGPFCTPRP 193
>Os01g0123900 Similar to Bowman-Birk type proteinase inhibitor (EBI)
Length = 193
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 83/155 (53%), Gaps = 18/155 (11%)
Query: 32 IRLPTDGG--DEWPSPPWDCCDKLKQSPLRIWPPKYKCLDEVD--HCAAACEDCK----- 82
IRLP DG + PW CCD + + P RI PP ++C DE++ C CE C+
Sbjct: 39 IRLPIDGAVAARRRTRPWKCCDNIVRLPERINPPFWQCDDELEPGQCFRQCEACRDPPGR 98
Query: 83 RADGGGYVCRDWYWGVNPGPKCTGGGGEEAVRSRPWK-CCDDAVCTRSMPPTCSCQDKVK 141
G +C D +WG +PG C PW CCD AVCT+S+PP C C D+V+
Sbjct: 99 PFPGRPLICDDVFWGDDPGTSCAPSS------EWPWGPCCDIAVCTKSLPPICHCSDEVE 152
Query: 142 SCSGGCGKCVQVESQP--PRFRCLDRYHGFPGPKC 174
SC+ CG+C V+S P F C D + G PGP+C
Sbjct: 153 SCAAACGQCEMVDSWSWRPLFVCRDSFTGDPGPRC 187
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.139 0.513
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,056,284
Number of extensions: 486298
Number of successful extensions: 1100
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1055
Number of HSP's successfully gapped: 8
Length of query: 179
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 85
Effective length of database: 12,127,685
Effective search space: 1030853225
Effective search space used: 1030853225
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 153 (63.5 bits)