Os01g0123900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Bowman-Birk type proteinase inhibitor (EBI).
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Os01g0123900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Bowman-Birk type proteinase inhibitor (EBI).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 480.35 | 1.03 | 13 | -3.74 | 1.95 | -4.2 | -2.25 | -4.48 | -0.14 | 19.7 | 1.17 | 4266 | 6.34 | -- |
| 502.47 | 1.04 | 13.1 | -4.4 | 2.19 | -3.78 | -1.34 | -- | -0.342 | 19.9 | 1.494 | 4269 | 6.25 | -- |
| 494.21 | 1.04 | 13 | -3.74 | 1.95 | -4.2 | -- | -4 | -0.14 | 19.7 | 1.17 | 4266 | 6.34 | -- |
| 501.22 | 1.04 | 13 | -4.47 | 1.72 | -4.14 | -- | -- | -0.231 | 18.9 | 1.605 | 4234 | 6.01 | -- |
| 530.3 | 1.07 | 13 | -4.64 | -- | -5 | -- | 0.271 | -0.277 | -- | 1.632 | 5485 | 6.7 | -- |
| 780.76 | 1.31 | 12.9 | -4.1 | 2.48 | -- | -1.37 | -- | 0.332 | 20.7 | -- | -- | -- | -- |
| 786.88 | 1.31 | 12.9 | -4.06 | 2.48 | -- | -- | -- | 0.332 | 20.7 | -- | -- | -- | -- |
| 529.92 | 1.07 | 13 | -4.57 | -- | -5.05 | -- | -- | -0.29 | -- | 1.635 | 5490 | 6.77 | -- |
| 912.06 | 1.41 | 13.2 | -- | 1.84 | -5.43 | -- | -- | -0.621 | 19.8 | 8.488 | 4268 | 8.82 | -- |
| 1135.72 | 1.57 | 12.8 | -4.07 | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
| 1221.42 | 1.63 | 12.8 | -- | 2.5 | -- | -- | -- | 0.784 | 20.6 | -- | -- | -- | -- |
| 879.23 | 1.38 | 12.9 | -- | -- | -5.87 | -- | -- | -0.0103 | -- | 9.3 | 5560 | 8.73 | -- |
| 1571.69 | 1.85 | 12.7 | -- | -- | -- | -- | -- | 0.762 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 408.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 2 | 408.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 3 | 408.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 7 |
| 10 | 410.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 7 |
| 35 | 413.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 36 | 413.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 54 | 415.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 55 | 415.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 58 | 415.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 69 | 417.34 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 70 | 417.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 71 | 417.40 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 76 | 417.58 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 83 | 418.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 84 | 418.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 155 | 422.10 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 164 | 422.49 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 177 | 422.94 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 17 | NA |
| 214 | 423.91 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 220 | 423.95 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 221 | 423.95 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 234 | 424.26 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 235 | 424.31 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 244 | 424.38 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 265 | 425.17 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 18 | NA |
| 274 | 425.26 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 18 | NA |
| 275 | 425.26 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 18 | NA |
| 307 | 426.94 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 321 | 427.13 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 347 | 427.80 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 363 | 428.25 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 456 | 430.18 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 468 | 430.37 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 10 | 9 |
| 507 | 431.15 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 555 | 431.74 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 561 | 431.75 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 576 | 431.86 | atmosphere | 1010.0 | 14400 | > th | dose independent | sin | 20 | NA |
| 618 | 432.48 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 641 | 432.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 642 | 432.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 653 | 433.11 | humidity | 60.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 658 | 433.17 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 15 | 7 |
| 724 | 434.20 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 738 | 434.22 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 739 | 434.22 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 743 | 434.26 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 760 | 434.52 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 785 | 434.80 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 786 | 434.80 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 793 | 434.89 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 830 | 435.47 | atmosphere | 1010.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 860 | 435.76 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 928 | 436.54 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 5 |
| 970 | 437.03 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 19 | 1 |