BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0124400 Os01g0124400|AK067257
(251 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0124400 Similar to Bowman Birk trypsin inhibitor 506 e-144
Os01g0124100 Proteinase inhibitor I12, Bowman-Birk family p... 348 2e-96
Os01g0124500 191 4e-49
Os01g0123900 Similar to Bowman-Birk type proteinase inhibit... 151 4e-37
Os01g0124000 Similar to Bowman Birk trypsin inhibitor 149 3e-36
Os01g0127600 Similar to Bowman-Birk type proteinase inhibit... 116 1e-26
Os02g0624000 92 4e-19
>Os01g0124400 Similar to Bowman Birk trypsin inhibitor
Length = 251
Score = 506 bits (1304), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MSNTTMAISTILLFLLAGLVAAHGDGDTMIRLPSDGAEAPPRPPKPWDCCDNIEMSPLEI 60
MSNTTMAISTILLFLLAGLVAAHGDGDTMIRLPSDGAEAPPRPPKPWDCCDNIEMSPLEI
Sbjct: 1 MSNTTMAISTILLFLLAGLVAAHGDGDTMIRLPSDGAEAPPRPPKPWDCCDNIEMSPLEI 60
Query: 61 FPPLYRCNDEVKQCSAACKECVEAPGDFPRGAFVCRDWYSTVDPGHMCTAPDQPTTKRPW 120
FPPLYRCNDEVKQCSAACKECVEAPGDFPRGAFVCRDWYSTVDPGHMCTAPDQPTTKRPW
Sbjct: 61 FPPLYRCNDEVKQCSAACKECVEAPGDFPRGAFVCRDWYSTVDPGHMCTAPDQPTTKRPW 120
Query: 121 KCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPLICEDVYWGADPGP 180
KCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPLICEDVYWGADPGP
Sbjct: 121 KCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPLICEDVYWGADPGP 180
Query: 181 LCTPRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRVESSEPPRYVCKDRFTGQ 240
LCTPRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRVESSEPPRYVCKDRFTGQ
Sbjct: 181 LCTPRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRVESSEPPRYVCKDRFTGQ 240
Query: 241 PGPMCKPRAEN 251
PGPMCKPRAEN
Sbjct: 241 PGPMCKPRAEN 251
>Os01g0124100 Proteinase inhibitor I12, Bowman-Birk family protein
Length = 259
Score = 348 bits (893), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/263 (71%), Positives = 207/263 (78%), Gaps = 16/263 (6%)
Query: 1 MSNTTMAISTILLFLLA--GLVAAHGDGDTMIRLPSDGAEAPPRPPKPWDCCDNIEMSPL 58
MSN +MA STILLFLLA GL AAHGD IRLPS+G +APP+P KPWDCCD+IEMSPL
Sbjct: 1 MSNNSMATSTILLFLLAVGGLAAAHGD---TIRLPSEG-DAPPQPAKPWDCCDDIEMSPL 56
Query: 59 EIFPPLYRCNDEVKQCSAACKECVEAP--GDFPRG---AFVCRDWYSTVDPGHMCTA--- 110
+IFPPLYRCNDEVKQCSAACKECV AP GD P G A VCRDWYST DPG CT
Sbjct: 57 KIFPPLYRCNDEVKQCSAACKECVAAPAAGDSPCGGGAALVCRDWYSTEDPGKPCTPERE 116
Query: 111 -PDQPTTKRPWKCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPLIC 169
P++ T KRPWKCCD+I +LP RI PPFWRCDDEL+PG+C AACK+CREAPGPFPGPLIC
Sbjct: 117 WPERTTKKRPWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGPLIC 176
Query: 170 EDVYWGADPGPLCTPRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRV-ESSEP 228
+DVYWGADPGP CTPRPWG CCD C K PP C C D+V C ACKDCQ V SSEP
Sbjct: 177 DDVYWGADPGPFCTPRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSEP 236
Query: 229 PRYVCKDRFTGQPGPMCKPRAEN 251
PR+VCKD+FTGQPGP C P +N
Sbjct: 237 PRFVCKDQFTGQPGPKCTPCTQN 259
>Os01g0124500
Length = 1131
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/148 (62%), Positives = 104/148 (70%), Gaps = 5/148 (3%)
Query: 104 PGHMCTAPDQPTTKRPWKCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPF 163
P +P PT KRPWKCCD I + P IFPPFWRC+DELEP +C A C+ C++
Sbjct: 35 PSDGAKSPKMPTEKRPWKCCDDIEEQPASIFPPFWRCNDELEPSQCAAQCEVCQDQEAS- 93
Query: 164 PGPLICEDVYWGADPGPLCTPRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRV 223
PG LIC DVYWGADPGP CTPRPWG CCD C++ PP CRC DEV CAAACKDCQ++
Sbjct: 94 PGRLICGDVYWGADPGPFCTPRPWGDCCDMDICSRSLPPICRCADEVESCAAACKDCQQL 153
Query: 224 E----SSEPPRYVCKDRFTGQPGPMCKP 247
E SSEPPRYVC D F G+PGP C P
Sbjct: 154 ESSSSSSEPPRYVCHDWFRGEPGPSCTP 181
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 107/195 (54%), Gaps = 30/195 (15%)
Query: 6 MAISTILLF-LLAGL---VAAHG---DGDTMIRLPSDGAEAPPRPP--KPWDCCDNIEMS 56
MA S+IL F LL GL VAAHG D IRLPSDGA++P P +PW CCD+IE
Sbjct: 1 MATSSILFFFLLGGLTVAVAAHGTANDDTNTIRLPSDGAKSPKMPTEKRPWKCCDDIEEQ 60
Query: 57 PLEIFPPLYRCNDEVK--QCSAACKECVEAPGDFPRGAFVCRDWYSTVDPGHMCTAPDQP 114
P IFPP +RCNDE++ QC+A C+ C + G +C D Y DPG CT
Sbjct: 61 PASIFPPFWRCNDELEPSQCAAQCEVCQDQEAS--PGRLICGDVYWGADPGPFCTP---- 114
Query: 115 TTKRPW-KCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPF----PGPLIC 169
RPW CCD + + R PP RC DE+E C AACK C++ P +C
Sbjct: 115 ---RPWGDCCD--MDICSRSLPPICRCADEVE--SCAAACKDCQQLESSSSSSEPPRYVC 167
Query: 170 EDVYWGADPGPLCTP 184
D + G +PGP CTP
Sbjct: 168 HDWFRG-EPGPSCTP 181
>Os01g0123900 Similar to Bowman-Birk type proteinase inhibitor (EBI)
Length = 193
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 94/140 (67%), Gaps = 6/140 (4%)
Query: 118 RPWKCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCRE--APGPFPGPLICEDVYWG 175
RPWKCCD+IV+LP+RI PPFW+CDDELEPG+C C++CR+ PLIC+DV+WG
Sbjct: 54 RPWKCCDNIVRLPERINPPFWQCDDELEPGQCFRQCEACRDPPGRPFPGRPLICDDVFWG 113
Query: 176 ADPGPLCTPR---PWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRVES-SEPPRY 231
DPG C P PWG CCD A C K PP C C DEV CAAAC C+ V+S S P +
Sbjct: 114 DDPGTSCAPSSEWPWGPCCDIAVCTKSLPPICHCSDEVESCAAACGQCEMVDSWSWRPLF 173
Query: 232 VCKDRFTGQPGPMCKPRAEN 251
VC+D FTG PGP C P N
Sbjct: 174 VCRDSFTGDPGPRCTPEMHN 193
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 99/193 (51%), Gaps = 22/193 (11%)
Query: 5 TMAISTILLFLLAGLVAAHGDGDTM--------IRLPSDGAEAPPRPPKPWDCCDNIEMS 56
TMA ++IL F LAGL AAHG IRLP DGA A R +PW CCDNI
Sbjct: 6 TMAATSILFFFLAGLAAAHGSTADDTTTTTTNTIRLPIDGAVAARRRTRPWKCCDNIVRL 65
Query: 57 PLEIFPPLYRCNDEVK--QCSAACKECVE-APGDFPRGAFVCRDWYSTVDPGHMCTAPDQ 113
P I PP ++C+DE++ QC C+ C + FP +C D + DPG C
Sbjct: 66 PERINPPFWQCDDELEPGQCFRQCEACRDPPGRPFPGRPLICDDVFWGDDPGTSCA---- 121
Query: 114 PTTKRPWK-CCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPL-ICED 171
P+++ PW CCD + + + PP C DE+E C AAC C PL +C D
Sbjct: 122 PSSEWPWGPCCD--IAVCTKSLPPICHCSDEVE--SCAAACGQCEMVDSWSWRPLFVCRD 177
Query: 172 VYWGADPGPLCTP 184
+ G DPGP CTP
Sbjct: 178 SFTG-DPGPRCTP 189
>Os01g0124000 Similar to Bowman Birk trypsin inhibitor
Length = 186
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 96/141 (68%), Gaps = 6/141 (4%)
Query: 109 TAPDQPTTKRPWKCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCRE---APGPFPG 165
T ++ RPW+CCD+I +I+PP WRC+DE++ +C AAC++C + G
Sbjct: 47 TDGNKQAKSRPWECCDNIEMSVLKIYPPRWRCNDEVK--QCAAACENCLQLVPGAGGEDV 104
Query: 166 PLICEDVYWGADPGPLCTPRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRVE- 224
+C+D Y +PGP+CTPRPWG CCDKAFC + PP C C DEV CAAACK+C V
Sbjct: 105 VFVCDDWYPTTNPGPVCTPRPWGDCCDKAFCTRSLPPICHCADEVASCAAACKECDMVNS 164
Query: 225 SSEPPRYVCKDRFTGQPGPMC 245
SSEPPRY+C+D FTG+PGPMC
Sbjct: 165 SSEPPRYICRDHFTGEPGPMC 185
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 108/192 (56%), Gaps = 24/192 (12%)
Query: 4 TTMAISTILLFLL--AGLVAAHGDG-DTMIRLPSDGAEAPPRPPK-----PWDCCDNIEM 55
+TM +++LLFLL AG+V A D+ IRLPS+GA K PW+CCDNIEM
Sbjct: 7 STMMAASMLLFLLVLAGIVTATTTTTDSNIRLPSNGAAGETDGNKQAKSRPWECCDNIEM 66
Query: 56 SPLEIFPPLYRCNDEVKQCSAACKECVE-APGDFPRG-AFVCRDWYSTVDPGHMCTAPDQ 113
S L+I+PP +RCNDEVKQC+AAC+ C++ PG FVC DWY T +PG +C
Sbjct: 67 SVLKIYPPRWRCNDEVKQCAAACENCLQLVPGAGGEDVVFVCDDWYPTTNPGPVC----- 121
Query: 114 PTTKRPW-KCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGP-LICED 171
T RPW CCD R PP C DE+ C AACK C P IC D
Sbjct: 122 --TPRPWGDCCDK--AFCTRSLPPICHCADEV--ASCAAACKECDMVNSSSEPPRYICRD 175
Query: 172 VYWGADPGPLCT 183
+ G +PGP+C
Sbjct: 176 HFTG-EPGPMCA 186
>Os01g0127600 Similar to Bowman-Birk type proteinase inhibitor D-II precursor
(IV)
Length = 179
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 82/137 (59%), Gaps = 16/137 (11%)
Query: 119 PWKCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPLICEDVYWGADP 178
PW CCD + Q P RI+PP ++C DE++ C AAC+ C+ A G G +C D YWG +P
Sbjct: 46 PWDCCDKLKQSPLRIWPPKYKCLDEVD--HCAAACEDCKRADG---GGYVCRDWYWGVNP 100
Query: 179 GPLCT---------PRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRVESSEPP 229
GP CT RPW KCCD A C + PPTC C D+V C+ C C +VE S+PP
Sbjct: 101 GPKCTGGGGEEAVRSRPW-KCCDDAVCTRSMPPTCSCQDKVKSCSGGCGKCVQVE-SQPP 158
Query: 230 RYVCKDRFTGQPGPMCK 246
R+ C DR+ G PGP C
Sbjct: 159 RFRCLDRYHGFPGPKCH 175
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
Query: 27 DTMIRLPSDGAEAPPRPPKPWDCCDNIEMSPLEIFPPLYRCNDEVKQCSAACKECVEAPG 86
++ IRLP+DG + P PP WDCCD ++ SPL I+PP Y+C DEV C+AAC++C A G
Sbjct: 29 NSNIRLPTDGGDEWPSPP--WDCCDKLKQSPLRIWPPKYKCLDEVDHCAAACEDCKRADG 86
Query: 87 DFPRGAFVCRDWYSTVDPGHMCT--APDQPTTKRPWKCCDSIVQLPQRIFPPFWRCDDEL 144
G +VCRDWY V+PG CT ++ RPWKCCD V R PP C D++
Sbjct: 87 ----GGYVCRDWYWGVNPGPKCTGGGGEEAVRSRPWKCCDDAVCT--RSMPPTCSCQDKV 140
Query: 145 EPGKCTAACKSCREAPGPFPGPLICEDVYWGADPGPLCTPRP 186
+ C+ C C + P C D Y G PGP C +P
Sbjct: 141 K--SCSGGCGKCVQVESQPP-RFRCLDRYHGF-PGPKCHNQP 178
>Os02g0624000
Length = 216
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 57/104 (54%), Gaps = 21/104 (20%)
Query: 148 KCTAACKSCREAPGPFPGPLICEDVYWGADPGPLCTPRPWGKCCDKAFCNKMNPPTCRCM 207
+C A CK C+EA PF PLIC DV +G K N TCR
Sbjct: 128 QCVARCKLCQEATRPFLNPLICNDVVFG---------------------TKTNRTTCRYT 166
Query: 208 DEVNKCAAACKDCQRVESSEPPRYVCKDRFTGQPGPMCKPRAEN 251
EV CAAACKD Q+VE S+PPRYVCKDRFTG PGP C P +
Sbjct: 167 VEVALCAAACKDYQQVELSDPPRYVCKDRFTGHPGPSCNPTSRT 210
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.140 0.506
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,796,394
Number of extensions: 699430
Number of successful extensions: 1713
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1655
Number of HSP's successfully gapped: 11
Length of query: 251
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 153
Effective length of database: 11,918,829
Effective search space: 1823580837
Effective search space used: 1823580837
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)