BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0124100 Os01g0124100|AK062394
(259 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0124100 Proteinase inhibitor I12, Bowman-Birk family p... 455 e-128
Os01g0124400 Similar to Bowman Birk trypsin inhibitor 305 2e-83
Os01g0124500 186 2e-47
Os01g0123900 Similar to Bowman-Birk type proteinase inhibit... 163 9e-41
Os01g0124000 Similar to Bowman Birk trypsin inhibitor 155 2e-38
Os01g0127600 Similar to Bowman-Birk type proteinase inhibit... 114 9e-26
Os02g0624000 78 5e-15
>Os01g0124100 Proteinase inhibitor I12, Bowman-Birk family protein
Length = 259
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/259 (89%), Positives = 232/259 (89%)
Query: 1 MSNNSMATSTIXXXXXXXXXXXXXXXDTIRLPSEGDAPPQPAKPWDCCDDIEMSPLKIFP 60
MSNNSMATSTI DTIRLPSEGDAPPQPAKPWDCCDDIEMSPLKIFP
Sbjct: 1 MSNNSMATSTILLFLLAVGGLAAAHGDTIRLPSEGDAPPQPAKPWDCCDDIEMSPLKIFP 60
Query: 61 PLYRCNDEVKQCSXXXXXXXXXXXXGDSPCGGGAALVCRDWYSTEDPGKPCTPEREWPER 120
PLYRCNDEVKQCS GDSPCGGGAALVCRDWYSTEDPGKPCTPEREWPER
Sbjct: 61 PLYRCNDEVKQCSAACKECVAAPAAGDSPCGGGAALVCRDWYSTEDPGKPCTPEREWPER 120
Query: 121 TTKKRPWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGPLICDDVY 180
TTKKRPWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGPLICDDVY
Sbjct: 121 TTKKRPWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGPLICDDVY 180
Query: 181 WGADPGPFCTPRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSEPPRFV 240
WGADPGPFCTPRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSEPPRFV
Sbjct: 181 WGADPGPFCTPRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSEPPRFV 240
Query: 241 CKDQFTGQPGPKCTPCTQN 259
CKDQFTGQPGPKCTPCTQN
Sbjct: 241 CKDQFTGQPGPKCTPCTQN 259
>Os01g0124400 Similar to Bowman Birk trypsin inhibitor
Length = 251
Score = 305 bits (781), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 187/261 (71%), Gaps = 12/261 (4%)
Query: 1 MSNNSMATSTIXXXXXXXXXXXXXXXDT-IRLPSEG-DAPPQPAKPWDCCDDIEMSPLKI 58
MSN +MA STI DT IRLPS+G +APP+P KPWDCCD+IEMSPL+I
Sbjct: 1 MSNTTMAISTILLFLLAGLVAAHGDGDTMIRLPSDGAEAPPRPPKPWDCCDNIEMSPLEI 60
Query: 59 FPPLYRCNDEVKQCSXXXXXXXXXXXXGDSPCGGGAALVCRDWYSTEDPGKPCTPEREWP 118
FPPLYRCNDEVKQCS GD P G A VCRDWYST DPG CT P
Sbjct: 61 FPPLYRCNDEVKQCSAACKECVEAP--GDFPRG---AFVCRDWYSTVDPGHMCTA----P 111
Query: 119 ERTTKKRPWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGPLICDD 178
++ T KRPWKCCD+I +LP RI PPFWRCDDEL+PG+C AACK+CREAPGPFPGPLIC+D
Sbjct: 112 DQPTTKRPWKCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPLICED 171
Query: 179 VYWGADPGPFCTPRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSEPPR 238
VYWGADPGP CTPRPWG CCD C K PP C C D+V C ACKDCQ V SSEPPR
Sbjct: 172 VYWGADPGPLCTPRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRV-ESSEPPR 230
Query: 239 FVCKDQFTGQPGPKCTPCTQN 259
+VCKD+FTGQPGP C P +N
Sbjct: 231 YVCKDRFTGQPGPMCKPRAEN 251
>Os01g0124500
Length = 1131
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 106/141 (75%), Gaps = 4/141 (2%)
Query: 118 PERTTKKRPWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGPLICD 177
P+ T+KRPWKCCD+I P I PPFWRC+DEL+P QC A C+ C++ PG LIC
Sbjct: 42 PKMPTEKRPWKCCDDIEEQPASIFPPFWRCNDELEPSQCAAQCEVCQDQEAS-PGRLICG 100
Query: 178 DVYWGADPGPFCTPRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPV---ASSS 234
DVYWGADPGPFCTPRPWGDCCD C++S+PPIC C D+V +C ACKDCQ + +SSS
Sbjct: 101 DVYWGADPGPFCTPRPWGDCCDMDICSRSLPPICRCADEVESCAAACKDCQQLESSSSSS 160
Query: 235 EPPRFVCKDQFTGQPGPKCTP 255
EPPR+VC D F G+PGP CTP
Sbjct: 161 EPPRYVCHDWFRGEPGPSCTP 181
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 86/175 (49%), Gaps = 33/175 (18%)
Query: 27 DTIRLPSEGDAPPQ---PAKPWDCCDDIEMSPLKIFPPLYRCNDEVK--QCSXXXXXXXX 81
+TIRLPS+G P+ +PW CCDDIE P IFPP +RCNDE++ QC+
Sbjct: 30 NTIRLPSDGAKSPKMPTEKRPWKCCDDIEEQPASIFPPFWRCNDELEPSQCAAQCEVCQ- 88
Query: 82 XXXXGDSPCGGGAALVCRDWYSTEDPGKPCTPEREWPERTTKKRPW-KCCDNIRRLPPRI 140
D G L+C D Y DPG CTP RPW CCD + R
Sbjct: 89 -----DQEASPG-RLICGDVYWGADPGPFCTP-----------RPWGDCCD--MDICSRS 129
Query: 141 HPPFWRCDDELKPGQCFAACKACREAPGPF----PGPLICDDVYWGADPGPFCTP 191
PP RC DE++ C AACK C++ P +C D + G +PGP CTP
Sbjct: 130 LPPICRCADEVE--SCAAACKDCQQLESSSSSSEPPRYVCHDWFRG-EPGPSCTP 181
>Os01g0123900 Similar to Bowman-Birk type proteinase inhibitor (EBI)
Length = 193
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/142 (60%), Positives = 99/142 (69%), Gaps = 5/142 (3%)
Query: 123 KKRPWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGP--LICDDVY 180
+ RPWKCCDNI RLP RI+PPFW+CDDEL+PGQCF C+ACR+ PG LICDDV+
Sbjct: 52 RTRPWKCCDNIVRLPERINPPFWQCDDELEPGQCFRQCEACRDPPGRPFPGRPLICDDVF 111
Query: 181 WGADPGPFCTPR---PWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSEPP 237
WG DPG C P PWG CCD CTKS+PPIC C D+V +C AC C+ V S S P
Sbjct: 112 WGDDPGTSCAPSSEWPWGPCCDIAVCTKSLPPICHCSDEVESCAAACGQCEMVDSWSWRP 171
Query: 238 RFVCKDQFTGQPGPKCTPCTQN 259
FVC+D FTG PGP+CTP N
Sbjct: 172 LFVCRDSFTGDPGPRCTPEMHN 193
>Os01g0124000 Similar to Bowman Birk trypsin inhibitor
Length = 186
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 95/139 (68%), Gaps = 5/139 (3%)
Query: 119 ERTTKKRPWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACRE---APGPFPGPLI 175
+ K RPW+CCDNI +I+PP WRC+DE+K QC AAC+ C + G +
Sbjct: 50 NKQAKSRPWECCDNIEMSVLKIYPPRWRCNDEVK--QCAAACENCLQLVPGAGGEDVVFV 107
Query: 176 CDDVYWGADPGPFCTPRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSE 235
CDD Y +PGP CTPRPWGDCCD CT+S+PPIC C D+VA+C ACK+C V SSSE
Sbjct: 108 CDDWYPTTNPGPVCTPRPWGDCCDKAFCTRSLPPICHCADEVASCAAACKECDMVNSSSE 167
Query: 236 PPRFVCKDQFTGQPGPKCT 254
PPR++C+D FTG+PGP C
Sbjct: 168 PPRYICRDHFTGEPGPMCA 186
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 83/173 (47%), Gaps = 31/173 (17%)
Query: 28 TIRLPSEGDA------PPQPAKPWDCCDDIEMSPLKIFPPLYRCNDEVKQCSXXXXXXXX 81
IRLPS G A ++PW+CCD+IEMS LKI+PP +RCNDEVKQC+
Sbjct: 35 NIRLPSNGAAGETDGNKQAKSRPWECCDNIEMSVLKIYPPRWRCNDEVKQCAAACENCLQ 94
Query: 82 XXXXGDSPCGGG--AALVCRDWYSTEDPGKPCTPEREWPERTTKKRPW-KCCDNIRRLPP 138
P GG VC DWY T +PG CTP RPW CCD +
Sbjct: 95 LV-----PGAGGEDVVFVCDDWYPTTNPGPVCTP-----------RPWGDCCD--KAFCT 136
Query: 139 RIHPPFWRCDDELKPGQCFAACKACREAPGPFPGP-LICDDVYWGADPGPFCT 190
R PP C DE+ C AACK C P IC D + G +PGP C
Sbjct: 137 RSLPPICHCADEV--ASCAAACKECDMVNSSSEPPRYICRDHFTG-EPGPMCA 186
>Os01g0127600 Similar to Bowman-Birk type proteinase inhibitor D-II precursor
(IV)
Length = 179
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 83/137 (60%), Gaps = 17/137 (12%)
Query: 126 PWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGPLICDDVYWGADP 185
PW CCD +++ P RI PP ++C DE+ C AAC+ C+ A G G +C D YWG +P
Sbjct: 46 PWDCCDKLKQSPLRIWPPKYKCLDEVD--HCAAACEDCKRADG---GGYVCRDWYWGVNP 100
Query: 186 GPFCT---------PRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSEP 236
GP CT RPW CCD+ CT+S+PP CSC DKV +C G C C V S+P
Sbjct: 101 GPKCTGGGGEEAVRSRPW-KCCDDAVCTRSMPPTCSCQDKVKSCSGGCGKC--VQVESQP 157
Query: 237 PRFVCKDQFTGQPGPKC 253
PRF C D++ G PGPKC
Sbjct: 158 PRFRCLDRYHGFPGPKC 174
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 28 TIRLPSEGDAPPQPAKPWDCCDDIEMSPLKIFPPLYRCNDEVKQCSXXXXXXXXXXXXGD 87
IRLP++G P+ PWDCCD ++ SPL+I+PP Y+C DEV C+ D
Sbjct: 31 NIRLPTDG-GDEWPSPPWDCCDKLKQSPLRIWPPKYKCLDEVDHCAAACE---------D 80
Query: 88 SPCGGGAALVCRDWYSTEDPGKPCTPEREWPERTTKKRPWKCCDNIRRLPPRIHPPFWRC 147
G VCRDWY +PG CT E + RPWKCCD+ + R PP C
Sbjct: 81 CKRADGGGYVCRDWYWGVNPGPKCTGGGG--EEAVRSRPWKCCDDA--VCTRSMPPTCSC 136
Query: 148 DDELKPGQCFAACKACREAPGPFPGPLICDDVYWGADPGPFCTPRP 193
D++K C C C + P C D Y G PGP C +P
Sbjct: 137 QDKVK--SCSGGCGKCVQVESQ-PPRFRCLDRYHGF-PGPKCHNQP 178
>Os02g0624000
Length = 216
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 58/108 (53%), Gaps = 22/108 (20%)
Query: 152 KPGQCFAACKACREAPGPFPGPLICDDVYWGADPGPFCTPRPWGDCCDNTTCTKSIPPIC 211
+ QC A CK C+EA PF PLIC+DV +G + TTC ++
Sbjct: 125 RLNQCVARCKLCQEATRPFLNPLICNDVVFGTKT-------------NRTTCRYTV---- 167
Query: 212 SCGDKVAACDGACKDCQPVASSSEPPRFVCKDQFTGQPGPKCTPCTQN 259
+VA C ACKD Q V S+PPR+VCKD+FTG PGP C P ++
Sbjct: 168 ----EVALCAAACKDYQQV-ELSDPPRYVCKDRFTGHPGPSCNPTSRT 210
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.140 0.518
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,111,123
Number of extensions: 637824
Number of successful extensions: 1202
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1155
Number of HSP's successfully gapped: 11
Length of query: 259
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 160
Effective length of database: 11,866,615
Effective search space: 1898658400
Effective search space used: 1898658400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)