BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0124000 Os01g0124000|AK065846
(186 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0124000 Similar to Bowman Birk trypsin inhibitor 366 e-102
Os01g0124500 174 5e-44
Os01g0124100 Proteinase inhibitor I12, Bowman-Birk family p... 157 5e-39
Os01g0124400 Similar to Bowman Birk trypsin inhibitor 149 2e-36
Os01g0123900 Similar to Bowman-Birk type proteinase inhibit... 147 3e-36
Os01g0127600 Similar to Bowman-Birk type proteinase inhibit... 135 1e-32
>Os01g0124000 Similar to Bowman Birk trypsin inhibitor
Length = 186
Score = 366 bits (939), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/186 (96%), Positives = 179/186 (96%)
Query: 1 MTMKVKSTMMAASMLLFLLVLAGIVXXXXXXXDSNIRLPSNGAAGETDGNKQAKSRPWEC 60
MTMKVKSTMMAASMLLFLLVLAGIV DSNIRLPSNGAAGETDGNKQAKSRPWEC
Sbjct: 1 MTMKVKSTMMAASMLLFLLVLAGIVTATTTTTDSNIRLPSNGAAGETDGNKQAKSRPWEC 60
Query: 61 CDNIEMSVLKIYPPRWRCNDEVKQCAAACENCLQLVPGAGGEDVVFVCDDWYPTTNPGPV 120
CDNIEMSVLKIYPPRWRCNDEVKQCAAACENCLQLVPGAGGEDVVFVCDDWYPTTNPGPV
Sbjct: 61 CDNIEMSVLKIYPPRWRCNDEVKQCAAACENCLQLVPGAGGEDVVFVCDDWYPTTNPGPV 120
Query: 121 CTPRPWGDCCDKAFCTRSLPPICHCADEVASCAAACKECDMVNSSSEPPRYICRDHFTGE 180
CTPRPWGDCCDKAFCTRSLPPICHCADEVASCAAACKECDMVNSSSEPPRYICRDHFTGE
Sbjct: 121 CTPRPWGDCCDKAFCTRSLPPICHCADEVASCAAACKECDMVNSSSEPPRYICRDHFTGE 180
Query: 181 PGPMCA 186
PGPMCA
Sbjct: 181 PGPMCA 186
>Os01g0124500
Length = 1131
Score = 174 bits (440), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 112/187 (59%), Gaps = 17/187 (9%)
Query: 10 MAASMLLFLLVLAGIVXXXXXXXDSN-----IRLPSNGAAGETDGNKQAKSRPWECCDNI 64
MA S +LF +L G+ +N IRLPS+GA + RPW+CCD+I
Sbjct: 1 MATSSILFFFLLGGLTVAVAAHGTANDDTNTIRLPSDGAKSP---KMPTEKRPWKCCDDI 57
Query: 65 EMSVLKIYPPRWRCNDEVK--QCAAACENCLQLVPGAGGEDVVFVCDDWYPTTNPGPVCT 122
E I+PP WRCNDE++ QCAA CE C G +C D Y +PGP CT
Sbjct: 58 EEQPASIFPPFWRCNDELEPSQCAAQCEVCQDQEASPGR----LICGDVYWGADPGPFCT 113
Query: 123 PRPWGDCCDKAFCTRSLPPICHCADEVASCAAACKECDMVN---SSSEPPRYICRDHFTG 179
PRPWGDCCD C+RSLPPIC CADEV SCAAACK+C + SSSEPPRY+C D F G
Sbjct: 114 PRPWGDCCDMDICSRSLPPICRCADEVESCAAACKDCQQLESSSSSSEPPRYVCHDWFRG 173
Query: 180 EPGPMCA 186
EPGP C
Sbjct: 174 EPGPSCT 180
>Os01g0124100 Proteinase inhibitor I12, Bowman-Birk family protein
Length = 259
Score = 157 bits (396), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 95/138 (68%), Gaps = 5/138 (3%)
Query: 50 NKQAKSRPWECCDNIEMSVLKIYPPRWRCNDEVK--QCAAACENCLQLVPGAGGEDVVFV 107
+ K RPW+CCDNI +I+PP WRC+DE+K QC AAC+ C + G +
Sbjct: 119 ERTTKKRPWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACRE---APGPFPGPLI 175
Query: 108 CDDWYPTTNPGPVCTPRPWGDCCDKAFCTRSLPPICHCADEVASCAAACKECDMVNSSSE 167
CDD Y +PGP CTPRPWGDCCD CT+S+PPIC C D+VA+C ACK+C V SSSE
Sbjct: 176 CDDVYWGADPGPFCTPRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSE 235
Query: 168 PPRYICRDHFTGEPGPMC 185
PPR++C+D FTG+PGP C
Sbjct: 236 PPRFVCKDQFTGQPGPKC 253
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 104/199 (52%), Gaps = 33/199 (16%)
Query: 7 STMMAASMLLFLLVLAGIVXXXXXXXDSNIRLPSNGAAGETDGNKQAKSRPWECCDNIEM 66
++M +++LLFLL + G+ IRLPS G A ++PW+CCD+IEM
Sbjct: 4 NSMATSTILLFLLAVGGLAAAHG----DTIRLPSEGDA------PPQPAKPWDCCDDIEM 53
Query: 67 SVLKIYPPRWRCNDEVKQCAAACENCLQLVPGAG----GEDVVFVCDDWYPTTNPGPVCT 122
S LKI+PP +RCNDEVKQC+AAC+ C+ P AG G VC DWY T +PG CT
Sbjct: 54 SPLKIFPPLYRCNDEVKQCSAACKECV-AAPAAGDSPCGGGAALVCRDWYSTEDPGKPCT 112
Query: 123 P-----------RPWGDCCD--KAFCTRSLPPICHCADEV--ASCAAACKECDMVNSSSE 167
P RPW CCD + R PP C DE+ C AACK C
Sbjct: 113 PEREWPERTTKKRPW-KCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFP 171
Query: 168 PPRYICRDHFTG-EPGPMC 185
P IC D + G +PGP C
Sbjct: 172 GP-LICDDVYWGADPGPFC 189
>Os01g0124400 Similar to Bowman Birk trypsin inhibitor
Length = 251
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 96/141 (68%), Gaps = 6/141 (4%)
Query: 47 TDGNKQAKSRPWECCDNIEMSVLKIYPPRWRCNDEVK--QCAAACENCLQLVPGAGGEDV 104
T ++ RPW+CCD+I +I+PP WRC+DE++ +C AAC++C + G
Sbjct: 109 TAPDQPTTKRPWKCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCRE---APGPFPG 165
Query: 105 VFVCDDWYPTTNPGPVCTPRPWGDCCDKAFCTRSLPPICHCADEVASCAAACKECDMVNS 164
+C+D Y +PGP+CTPRPWG CCDKAFC + PP C C DEV CAAACK+C V
Sbjct: 166 PLICEDVYWGADPGPLCTPRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRVE- 224
Query: 165 SSEPPRYICRDHFTGEPGPMC 185
SSEPPRY+C+D FTG+PGPMC
Sbjct: 225 SSEPPRYVCKDRFTGQPGPMC 245
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 107/192 (55%), Gaps = 24/192 (12%)
Query: 7 STMMAASMLLFLLVLAGIVXXXXXXXDSNIRLPSNGAAGETDGNKQAKSRPWECCDNIEM 66
+TM +++LLFLL AG+V D+ IRLPS+GA K PW+CCDNIEM
Sbjct: 4 TTMAISTILLFLL--AGLVAAHGDG-DTMIRLPSDGAEAPPRPPK-----PWDCCDNIEM 55
Query: 67 SVLKIYPPRWRCNDEVKQCAAACENCLQLVPGAGGEDVVFVCDDWYPTTNPGPVC----- 121
S L+I+PP +RCNDEVKQC+AAC+ C++ PG FVC DWY T +PG +C
Sbjct: 56 SPLEIFPPLYRCNDEVKQCSAACKECVE-APGDFPRG-AFVCRDWYSTVDPGHMCTAPDQ 113
Query: 122 --TPRPWGDCCDK--AFCTRSLPPICHCADEV--ASCAAACKECDMVNSSSEPPRYICRD 175
T RPW CCD R PP C DE+ C AACK C P IC D
Sbjct: 114 PTTKRPW-KCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGP-LICED 171
Query: 176 HFTG-EPGPMCA 186
+ G +PGP+C
Sbjct: 172 VYWGADPGPLCT 183
>Os01g0123900 Similar to Bowman-Birk type proteinase inhibitor (EBI)
Length = 193
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 113/195 (57%), Gaps = 20/195 (10%)
Query: 3 MKVKSTMMAASMLLFLLVLAGIVXXXXXXXDSN-------IRLPSNGAAGETDGNKQAKS 55
MK+K TM A S+L F L AG+ D IRLP +GA + ++
Sbjct: 1 MKMKRTMAATSILFFFL--AGLAAAHGSTADDTTTTTTNTIRLPIDGAVA-----ARRRT 53
Query: 56 RPWECCDNIEMSVLKIYPPRWRCNDEVK--QCAAACENCLQLVPGAGGEDVVFVCDDWYP 113
RPW+CCDNI +I PP W+C+DE++ QC CE C G +CDD +
Sbjct: 54 RPWKCCDNIVRLPERINPPFWQCDDELEPGQCFRQCEACRDPP-GRPFPGRPLICDDVFW 112
Query: 114 TTNPGPVCTPR---PWGDCCDKAFCTRSLPPICHCADEVASCAAACKECDMVNSSSEPPR 170
+PG C P PWG CCD A CT+SLPPICHC+DEV SCAAAC +C+MV+S S P
Sbjct: 113 GDDPGTSCAPSSEWPWGPCCDIAVCTKSLPPICHCSDEVESCAAACGQCEMVDSWSWRPL 172
Query: 171 YICRDHFTGEPGPMC 185
++CRD FTG+PGP C
Sbjct: 173 FVCRDSFTGDPGPRC 187
>Os01g0127600 Similar to Bowman-Birk type proteinase inhibitor D-II precursor
(IV)
Length = 179
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 96/162 (59%), Gaps = 25/162 (15%)
Query: 33 DSNIRLPSNGAAGETDGNKQAKSRPWECCDNIEMSVLKIYPPRWRCNDEVKQCAAACENC 92
+SNIRLP TDG + S PW+CCD ++ S L+I+PP+++C DEV CAAACE+C
Sbjct: 29 NSNIRLP-------TDGGDEWPSPPWDCCDKLKQSPLRIWPPKYKCLDEVDHCAAACEDC 81
Query: 93 LQLVPGAGGEDVVFVCDDWYPTTNPGPVCT---------PRPWGDCCDKAFCTRSLPPIC 143
+ G +VC DWY NPGP CT RPW CCD A CTRS+PP C
Sbjct: 82 KRADGGG------YVCRDWYWGVNPGPKCTGGGGEEAVRSRPW-KCCDDAVCTRSMPPTC 134
Query: 144 HCADEVASCAAACKECDMVNSSSEPPRYICRDHFTGEPGPMC 185
C D+V SC+ C +C V S+PPR+ C D + G PGP C
Sbjct: 135 SCQDKVKSCSGGCGKC--VQVESQPPRFRCLDRYHGFPGPKC 174
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.136 0.472
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,933,086
Number of extensions: 376416
Number of successful extensions: 774
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 747
Number of HSP's successfully gapped: 8
Length of query: 186
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 91
Effective length of database: 12,075,471
Effective search space: 1098867861
Effective search space used: 1098867861
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 153 (63.5 bits)