BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0112400 Os01g0112400|AK106825
(286 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0112400 Major intrinsic protein family protein 399 e-111
Os01g0202800 Similar to NOD26-like membrane integral protei... 121 6e-28
Os02g0232900 Similar to NOD26-like membrane integral protei... 119 2e-27
Os02g0745100 Similar to NOD26-like membrane integral protei... 100 2e-21
Os06g0228200 Similar to NOD26-like membrane integral protei... 91 8e-19
Os08g0152000 83 2e-16
Os06g0552700 80 2e-15
Os08g0152100 77 1e-14
Os10g0513200 Similar to Nodulin-26 (N-26) 64 9e-11
>Os01g0112400 Major intrinsic protein family protein
Length = 286
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/235 (87%), Positives = 205/235 (87%)
Query: 52 IGFLIREVMVEGLASFLVVFWSCVAALMQEMYGTLTFPMVCLVVAMTVAFVLSWLGPAHF 111
IGFLIREVMVEGLASFLVVFWSCVAALMQEMYGTLTFPMVCLVVAMTVAFVLSWLGPAHF
Sbjct: 52 IGFLIREVMVEGLASFLVVFWSCVAALMQEMYGTLTFPMVCLVVAMTVAFVLSWLGPAHF 111
Query: 112 NPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHGT 171
NPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHGT
Sbjct: 112 NPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHGT 171
Query: 172 RLPFLMEFLASAVLMIVIATVATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNPART 231
RLPFLMEFLASAVLMIVIATVATD MNPART
Sbjct: 172 RLPFLMEFLASAVLMIVIATVATDGTAGKTVGGIAIGAAVGGLGLVIGPVSGGSMNPART 231
Query: 232 LGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRLSHRIVAFLCGTSVGIAGSP 286
LGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRLSHRIVAFLCGTSVGIAGSP
Sbjct: 232 LGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRLSHRIVAFLCGTSVGIAGSP 286
>Os01g0202800 Similar to NOD26-like membrane integral protein ZmNIP1-1
Length = 246
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 115/224 (51%), Gaps = 17/224 (7%)
Query: 59 VMVEGLASFLVVFWSCVAALM-QEMYGTLTFPMVCLV---VAMTVAFVLSWLGPAHFNPA 114
++ E L ++ ++F C A ++ Q G +TFP +C V V M + + +S + AHFNPA
Sbjct: 9 ILAEILGTYFMIFAGCGAVVVNQSTGGAVTFPGICAVWGLVVMVLVYTVSHISGAHFNPA 68
Query: 115 VTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMR-----PRHDH-FYGTAPV-- 166
VT+ FA RF W ++P YV AQ+ GS +A L++ V R +H F+GT P
Sbjct: 69 VTVAFATCGRFR-WKQVPSYVVAQVLGSTMASLTLRVVFGGGGGGARGEHLFFGTTPAGS 127
Query: 167 VVHGTRLPFLMEFLASAVLMIVIATVATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM 226
+ L F++ F LM V++ VATD M
Sbjct: 128 MAQAAALEFVISFF----LMFVVSGVATDNRAIGELAGLAVGATVAVNVLFAGPVTGASM 183
Query: 227 NPARTLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRLSHR 270
NPAR+LGPA+V GRY GVW+YV APV+G + GA +R + +
Sbjct: 184 NPARSLGPAMVAGRYGGVWVYVAAPVSGTVCGAWAYNLLRFTDK 227
>Os02g0232900 Similar to NOD26-like membrane integral protein ZmNIP1-1
Length = 284
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 117/221 (52%), Gaps = 9/221 (4%)
Query: 55 LIREVMVEGLASFLVVFWSCVA-ALMQEMYGTLTFPMVCLV---VAMTVAFVLSWLGPAH 110
I++++ E ++ ++F C A + Q G +TFP V +V M + + + + AH
Sbjct: 46 FIQKIIAEIFGTYFLIFAGCGAVTINQSKNGQITFPGVAIVWGLAVMVMVYAVGHISGAH 105
Query: 111 FNPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHG 170
FNPAVT+ FA RRFP W ++P Y AAQ+ G+ LA ++ + RH+HF GT P G
Sbjct: 106 FNPAVTLAFATCRRFP-WRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPGTLPA---G 161
Query: 171 TRLPFL-MEFLASAVLMIVIATVATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNPA 229
+ + L +EF+ + LM VI+ VATD MNPA
Sbjct: 162 SDVQSLVLEFIITFYLMFVISGVATDNRAIGELAGLAVGATILLNVLIAGPISGASMNPA 221
Query: 230 RTLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRLSHR 270
R+LGPA++ G Y +W+Y+V PVAG + GA +R +++
Sbjct: 222 RSLGPAMIGGEYRSIWVYIVGPVAGAVAGAWAYNIIRFTNK 262
>Os02g0745100 Similar to NOD26-like membrane integral protein ZmNIP2-1
Length = 298
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 105/218 (48%), Gaps = 8/218 (3%)
Query: 55 LIREVMVEGLASFLVVFWSCVAALMQ----EMYGTLTFPMVCLVVAMTVAFVLSWLGPAH 110
L+++V+ E +A+FL+VF +C AA + L + ++ + + + + AH
Sbjct: 47 LLKKVVSEVVATFLLVFMTCGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVGHISGAH 106
Query: 111 FNPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHG 170
NPAVT+ FA +R FP W ++P Y AAQ G++ A + AV+ P D T PV H
Sbjct: 107 MNPAVTLAFAVFRHFP-WIQVPFYWAAQFTGAICASFVLKAVIHPV-DVIGTTTPVGPHW 164
Query: 171 TRLPFLMEFLASAVLMIVIATVATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNPAR 230
L ++E + + +M V VATD MNPAR
Sbjct: 165 HSL--VVEVIVTFNMMFVTLAVATDTRAVGELAGLAVGSAVCITSIFAGAISGGSMNPAR 222
Query: 231 TLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRLS 268
TLGPA+ ++DG+WIY + PV G L GA +R
Sbjct: 223 TLGPALASNKFDGLWIYFLGPVMGTLSGAWTYTFIRFE 260
>Os06g0228200 Similar to NOD26-like membrane integral protein ZmNIP2-2
Length = 298
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 55 LIREVMVEGLASFLVVFWSCVAALM--QEMY--GTLTFPMVCLVVAMTVAFVLSWLGPAH 110
L+++V+ E +A+FL+VF +C AA + ++M L +V ++ + + + AH
Sbjct: 50 LLKKVISEVVATFLLVFVTCGAASIYGEDMKRISQLGQSVVGGLIVTVMIYATGHISGAH 109
Query: 111 FNPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHG 170
NPAVT++FA +R FP W ++P Y AAQ G++ A + AV+ P + V G
Sbjct: 110 MNPAVTLSFAFFRHFP-WIQVPFYWAAQFTGAMCAAFVLRAVLYP----------IEVLG 158
Query: 171 TRLP-------FLMEFLASAVLMIVIATVATDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 223
T P ++E + + +M V VATD
Sbjct: 159 TTTPTGPHWHALVIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSG 218
Query: 224 XXMNPARTLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRL 267
MNPARTL PA+ Y G+WIY + PV G L GA +R
Sbjct: 219 GSMNPARTLAPAVASNVYTGLWIYFLGPVVGTLSGAWVYTYIRF 262
>Os08g0152000
Length = 305
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 8/217 (3%)
Query: 55 LIREVMVEGLASFLVVFWSCVAALMQEMY-GTLTFPMVCLVVAMTVA-FVLSWL--GPAH 110
L+++V E +F ++F +M E + G + + + V VLS + H
Sbjct: 93 LVKKVGAEFFGTFTLIFTVLSTIIMDEQHKGVESLLGIATSAGLAVTVLVLSLIHISGCH 152
Query: 111 FNPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHG 170
NPAV+I + P LP Y+AAQ+ GS+ A +V + P + T P V G
Sbjct: 153 LNPAVSIAMTVFGHLPPAHLLP-YIAAQILGSITASFAVKGMYHPVNPGIV-TVPKV--G 208
Query: 171 TRLPFLMEFLASAVLMIVIATVATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNPAR 230
T F +EF+ + VL+ +I +ATD MNPAR
Sbjct: 209 TVEAFFLEFVTTFVLLFIITALATDPNAVKELIAVAVGATIMMNALVAGPSTGASMNPAR 268
Query: 231 TLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRL 267
TLGPAI GRY +W+Y+VA G + G A++L
Sbjct: 269 TLGPAIATGRYTQIWVYLVATPLGAVAGEGFYFAIKL 305
>Os06g0552700
Length = 273
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 55 LIREVMVEGLASFLVVFWSCVAALMQEMYGTLTFPMVCLV---VAMTVAFVLSWLGPAHF 111
++ ++ E LA+F ++F A ++E G +TFP V + M + + + + AH
Sbjct: 55 FLQMLLAEFLATFFLMFAGLGAITVEEKKGAVTFPGVAVAWGAAVMAMVYAVGHVSGAHL 114
Query: 112 NPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHGT 171
NPAVT+ FA RFP W + P Y AQ A + A + + + RH T P H
Sbjct: 115 NPAVTLGFAVAGRFP-WRRAPAYALAQTAAATAASVVLRLMFGGRHAPVPATLPGGAHAQ 173
Query: 172 RLPFLMEFLASAVLMIVIATVATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNPART 231
L ++EF+ + LM VI VATD MNPAR+
Sbjct: 174 SL--VIEFVITFYLMFVIMAVATDDQAVGHMAGVAVGGTIMLNVLFAGPVSGASMNPARS 231
Query: 232 LGPAIVLGRYDGVWIYVVAP 251
+GPA+V +Y +W+Y++ P
Sbjct: 232 IGPALVGSKYTALWVYILGP 251
>Os08g0152100
Length = 278
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 55 LIREVMVEGLASFLVVFWSCVAALMQEMYGTL-TFPMVCLVVAMTVA-FVLSWL--GPAH 110
L+++V E +F+++F +M E + ++ T + + V VLS + H
Sbjct: 66 LLKKVSAEFFGTFILIFTVLSTIIMDEQHKSIETLLGIATSAGLAVTVLVLSLIHISGCH 125
Query: 111 FNPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHG 170
NPA++I A + P LP Y+++Q+ G++ A +V + P + T P V G
Sbjct: 126 LNPAISIAMAVFGHLPSAHLLP-YISSQILGAVAASFAVKGLYHPVNPGIV-TVPNV--G 181
Query: 171 TRLPFLMEFLASAVLMIVIATVATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNPAR 230
T F +EF+ + L+ +I +ATD MNPAR
Sbjct: 182 TVEAFFVEFIITFFLLFIITALATDPNAVKELIAVAVGATVMMNILVAGPSTGASMNPAR 241
Query: 231 TLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRL 267
T+G AI GRY +W+Y+VA G + G A++L
Sbjct: 242 TIGAAIATGRYTQIWVYLVATPLGAIAGTGAYVAIKL 278
>Os10g0513200 Similar to Nodulin-26 (N-26)
Length = 152
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 5/142 (3%)
Query: 131 LPLYVAAQLAGSLLACLSVNAVMRPRHDHFYG--TAPVVVHGTRLPFLMEFLASAVLMIV 188
+P YVA Q+ GS+ A ++ V H G T P T F EF+ + L+ V
Sbjct: 1 VPAYVAVQVLGSICAGFALKGVF---HPFLSGGVTVPDPTISTAQAFFTEFIITFNLLFV 57
Query: 189 IATVATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNPARTLGPAIVLGRYDGVWIYV 248
+ VATD MNP RTLGPA+ G Y +WIY+
Sbjct: 58 VTAVATDTRAVGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYL 117
Query: 249 VAPVAGMLVGALCNRAVRLSHR 270
+AP G + GA AV+L
Sbjct: 118 IAPTLGAVAGAGVYTAVKLRDE 139
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.331 0.140 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,662,165
Number of extensions: 215777
Number of successful extensions: 636
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 610
Number of HSP's successfully gapped: 10
Length of query: 286
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 186
Effective length of database: 11,814,401
Effective search space: 2197478586
Effective search space used: 2197478586
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 155 (64.3 bits)