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Os06g0228200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to NOD26-like membrane integral protein ZmNIP2-2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.9 (0.034) R2 : 0.401
β1 : -1.3 (0.124) R2dD : 0.149 R2D : 0.112
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.63 (0.113) R2dE : 0.28 R2E : 0.243
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.302 (0.0731) R2dN8 : 0.032 R2N8 : -0.0243
σ : 0.634
deviance : 185.2
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 0.135
memory length : 129
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 4.78
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
174.61 0.621 12.9 -1.25 0.448 2.01 -0.931 1.26 -0.308 21.5 0.63 93 3.91 --
175.65 0.617 12.9 -1.29 0.486 2.01 -1.43 -- -0.299 21.3 0.6001 92 3.81 --
175.82 0.618 12.9 -1.2 0.527 2.05 -- 2.3 -0.29 21.6 0.5545 93 3.67 --
183 0.63 12.9 -1.26 0.544 2.02 -- -- -0.305 21.4 0.43 95 3.66 --
183.49 0.631 12.9 -1.12 -- 1.89 -- 2.42 -0.251 -- 0.85 102 4.47 --
249.68 0.741 12.8 -1.27 0.51 -- 1.3 -- -0.14 8.53 -- -- -- --
254.82 0.748 12.8 -1.23 0.52 -- -- -- -0.142 7.98 -- -- -- --
185.2 0.634 12.9 -1.3 -- 1.63 -- -- -0.302 -- 0.135 129 4.78 --
225.65 0.7 12.9 -- 0.506 2.02 -- -- -0.254 21 0.61 94 3.73 --
269.55 0.767 12.8 -1.23 -- -- -- -- -0.135 -- -- -- -- --
294.91 0.803 12.8 -- 0.512 -- -- -- -0.00437 8.15 -- -- -- --
229.11 0.705 12.8 -- -- 1.63 -- -- -0.145 -- 0.1311 127 4.69 --
309.34 0.821 12.8 -- -- -- -- -- 0.00123 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 175.62 radiation 1.0 90 > th dose independent sin 10 NA
2 176.58 wind 9.0 270 < th dose dependent rect. 9 18
3 176.87 radiation 1.0 90 < th dose dependent sin 10 NA
4 177.37 radiation 30.0 270 < th dose independent rect. 3 6
5 177.50 precipitation 0.1 270 < th dose independent rect. 3 6
6 177.50 precipitation 0.1 270 < th dose dependent rect. 3 6
8 177.64 wind 1.0 270 > th dose independent rect. 14 9
11 178.65 radiation 1.0 90 < th dose independent sin 10 NA
12 178.87 wind 9.0 270 < th dose independent rect. 23 15
13 178.92 wind 9.0 270 < th dose independent rect. 9 18
14 179.08 temperature 30.0 270 < th dose independent rect. 3 6
16 179.64 temperature 10.0 270 > th dose independent rect. 14 9
17 179.64 temperature 10.0 270 > th dose independent rect. 23 15
18 179.64 atmosphere 995.0 270 > th dose independent rect. 23 15
19 179.65 wind 9.0 270 < th dose independent rect. 3 6
20 179.65 temperature 10.0 270 > th dose independent rect. 3 6
22 179.65 humidity 50.0 270 > th dose independent rect. 3 6
23 179.65 atmosphere 995.0 270 > th dose independent rect. 3 6
24 179.65 atmosphere 1015.0 270 < th dose independent rect. 3 6
25 179.65 temperature 10.0 270 > th dose independent rect. 9 18
33 181.28 radiation 1.0 90 > th dose independent rect. 17 18
35 181.44 wind 9.0 270 < th dose independent rect. 14 9
43 182.59 precipitation 0.1 270 < th dose independent rect. 14 9
44 182.59 precipitation 0.1 270 < th dose dependent rect. 14 9
52 183.12 atmosphere 1015.0 270 < th dose independent rect. 23 15
53 183.23 atmosphere 995.0 270 > th dose independent rect. 9 18
63 183.61 precipitation 0.1 270 < th dose independent rect. 9 18
64 183.61 precipitation 0.1 270 < th dose dependent rect. 9 18
91 185.19 precipitation 0.1 270 < th dose independent rect. 23 15
92 185.19 precipitation 0.1 270 < th dose dependent rect. 23 15
103 185.89 radiation 40.0 270 < th dose dependent rect. 3 6
121 186.88 temperature 30.0 90 < th dose independent rect. 5 6
122 186.90 wind 1.0 10 > th dose independent rect. 16 8
133 187.31 humidity 50.0 270 > th dose independent rect. 9 18
134 187.37 atmosphere 1015.0 270 < th dose independent rect. 14 8
142 187.94 temperature 10.0 90 > th dose dependent rect. 16 8
156 188.67 precipitation 0.1 90 < th dose independent rect. 5 6
157 188.67 precipitation 0.1 90 < th dose dependent rect. 5 6
158 188.68 temperature 15.0 90 > th dose independent rect. 5 6
164 188.98 atmosphere 995.0 90 > th dose independent rect. 5 6
165 188.98 atmosphere 1015.0 90 < th dose independent rect. 5 6
175 189.20 wind 9.0 90 < th dose independent rect. 5 6
180 189.37 wind 9.0 270 < th dose dependent rect. 3 6
181 189.37 temperature 10.0 270 > th dose dependent rect. 3 6
184 189.72 humidity 50.0 90 > th dose independent rect. 5 6
185 189.73 radiation 1.0 270 > th dose independent rect. 17 14
188 189.82 wind 9.0 270 < th dose dependent rect. 9 6
194 190.06 wind 9.0 270 < th dose dependent rect. 21 6
200 190.14 temperature 10.0 10 > th dose dependent rect. 16 8
207 190.23 atmosphere 995.0 270 > th dose dependent rect. 3 6
220 190.43 precipitation 0.1 10 < th dose independent rect. 16 8
221 190.43 precipitation 0.1 10 < th dose dependent rect. 16 8
224 190.45 radiation 1.0 90 > th dose independent rect. 4 7
235 190.53 humidity 50.0 270 > th dose dependent rect. 21 6
238 190.64 precipitation 0.1 270 < th dose independent rect. 3 18
239 190.64 precipitation 0.1 270 < th dose dependent rect. 3 18
245 190.79 temperature 10.0 10 > th dose independent rect. 16 8
246 190.79 radiation 40.0 10 < th dose independent rect. 16 8
247 190.79 temperature 10.0 10 > th dose independent rect. 24 16
267 191.09 wind 9.0 10 < th dose independent rect. 16 8
268 191.14 radiation 1.0 90 < th dose dependent rect. 23 17
269 191.15 wind 9.0 10 < th dose independent rect. 24 16
278 191.39 atmosphere 1015.0 10 < th dose independent rect. 24 16
296 191.48 radiation 40.0 270 < th dose independent rect. 14 8
301 191.58 wind 5.0 270 < th dose independent rect. 22 5
302 191.58 temperature 10.0 270 > th dose dependent rect. 14 9
314 191.78 atmosphere 1015.0 10 < th dose dependent rect. 16 8
315 191.80 atmosphere 995.0 90 > th dose dependent rect. 5 6
316 191.84 humidity 50.0 270 > th dose independent rect. 23 15
318 191.91 wind 9.0 90 < th dose dependent rect. 5 6
327 192.21 precipitation 0.1 270 < th dose independent rect. 15 18
328 192.21 precipitation 0.1 270 < th dose dependent rect. 15 18
332 192.35 wind 1.0 270 > th dose independent rect. 3 6
347 192.70 radiation 40.0 270 < th dose independent rect. 15 18
350 192.74 atmosphere 995.0 10 > th dose independent rect. 24 16
357 192.88 wind 7.0 270 < th dose independent rect. 9 6
360 192.93 wind 5.0 270 < th dose independent rect. 11 2
384 193.25 wind 9.0 270 < th dose dependent rect. 11 2
414 193.78 atmosphere 995.0 270 > th dose dependent rect. 4 4
416 193.83 temperature 10.0 270 > th dose independent rect. 9 6
417 193.83 atmosphere 1015.0 270 < th dose independent rect. 9 6
419 193.83 temperature 10.0 270 > th dose independent rect. 15 18
421 193.85 humidity 90.0 30 < th dose independent rect. 16 19
422 193.89 precipitation 0.1 270 < th dose independent rect. 16 16
423 193.89 precipitation 0.1 270 < th dose dependent rect. 16 16
426 193.99 temperature 15.0 270 > th dose independent rect. 3 18
429 194.02 atmosphere 995.0 270 > th dose independent rect. 9 6
432 194.05 humidity 50.0 270 > th dose dependent rect. 3 6
441 194.22 radiation 1.0 90 < th dose independent rect. 23 17
443 194.22 humidity 50.0 270 > th dose dependent rect. 19 9
450 194.30 radiation 40.0 10 < th dose dependent rect. 16 8
469 194.41 atmosphere 1015.0 270 < th dose independent rect. 9 18
471 194.43 atmosphere 1015.0 10 < th dose independent rect. 16 8
475 194.50 radiation 1.0 90 < th dose dependent rect. 23 9
483 194.57 temperature 10.0 270 > th dose dependent rect. 4 4
496 194.66 wind 9.0 270 < th dose independent rect. 15 18
498 194.69 temperature 10.0 270 > th dose independent rect. 21 6
499 194.69 temperature 30.0 270 < th dose independent rect. 21 6
500 194.69 humidity 50.0 270 > th dose independent rect. 21 6
503 194.69 atmosphere 995.0 270 > th dose independent rect. 21 6
504 194.69 radiation 1.0 270 < th dose independent rect. 21 6
510 194.69 radiation 1.0 270 < th dose dependent rect. 21 6
520 194.77 precipitation 0.1 270 < th dose independent rect. 9 6
521 194.77 precipitation 0.1 270 < th dose dependent rect. 9 6
525 194.83 temperature 10.0 270 > th dose dependent rect. 22 5
550 194.91 atmosphere 1015.0 270 < th dose dependent rect. 14 8
557 195.04 radiation 1.0 270 < th dose dependent rect. 6 22
564 195.12 wind 9.0 270 < th dose independent rect. 8 8
576 195.23 precipitation 0.1 270 < th dose independent rect. 22 5
578 195.23 precipitation 0.1 270 < th dose dependent rect. 22 5
599 195.46 atmosphere 1015.0 270 < th dose independent rect. 3 18
601 195.51 temperature 10.0 90 > th dose dependent rect. 24 16
616 195.66 wind 7.0 90 < th dose independent rect. 11 5
626 195.73 temperature 10.0 10 > th dose dependent rect. 24 16
628 195.74 temperature 10.0 270 > th dose dependent rect. 22 16
648 195.86 atmosphere 995.0 10 > th dose independent rect. 16 8
654 195.94 radiation 1.0 30 > th dose independent rect. 16 21
659 195.96 temperature 10.0 10 > th dose dependent rect. 5 6
661 195.98 wind 9.0 270 < th dose dependent rect. 22 16
662 196.03 wind 1.0 90 > th dose independent rect. 16 8
680 196.15 atmosphere 995.0 270 > th dose independent rect. 14 8
685 196.22 temperature 10.0 270 > th dose independent rect. 8 8
686 196.22 atmosphere 1015.0 270 < th dose independent rect. 8 8
687 196.22 temperature 10.0 270 > th dose independent rect. 16 16
700 196.30 radiation 1.0 270 > th dose independent rect. 5 2
725 196.61 wind 9.0 270 < th dose independent rect. 3 18
737 196.73 wind 9.0 270 < th dose independent rect. 16 16
747 196.84 radiation 1.0 270 > th dose independent rect. 9 5
756 196.97 temperature 10.0 90 > th dose independent rect. 11 5
757 196.97 atmosphere 1015.0 90 < th dose independent rect. 11 5
778 197.06 humidity 90.0 30 < th dose independent rect. 16 17
794 197.15 radiation 1.0 90 < th dose independent rect. 23 8
817 197.25 wind 9.0 270 < th dose independent rect. 7 22
826 197.31 temperature 10.0 270 > th dose dependent rect. 9 5
836 197.40 precipitation 0.1 270 < th dose independent rect. 8 8
838 197.40 precipitation 0.1 270 < th dose dependent rect. 8 8
851 197.48 precipitation 0.1 30 < th dose independent rect. 24 16
853 197.48 precipitation 0.1 30 < th dose dependent rect. 24 16
857 197.50 wind 1.0 270 > th dose independent rect. 14 19
863 197.55 atmosphere 995.0 270 > th dose dependent rect. 22 5
870 197.67 precipitation 0.1 90 < th dose independent rect. 11 5
872 197.67 precipitation 0.1 90 < th dose dependent rect. 11 5
878 197.72 precipitation 0.1 270 < th dose independent rect. 2 21
879 197.72 precipitation 0.1 270 < th dose dependent rect. 2 21
883 197.74 temperature 10.0 270 > th dose dependent rect. 23 3
885 197.77 atmosphere 995.0 270 > th dose dependent rect. 23 3
893 197.82 radiation 20.0 270 < th dose independent rect. 5 2
906 197.94 precipitation 0.1 270 < th dose independent rect. 5 2
907 197.94 precipitation 0.1 270 < th dose dependent rect. 5 2
908 197.95 humidity 70.0 270 > th dose independent rect. 5 2
917 198.06 temperature 10.0 270 > th dose dependent rect. 5 2
931 198.17 wind 7.0 270 < th dose independent rect. 5 2
933 198.17 temperature 10.0 270 > th dose independent rect. 5 2
935 198.17 temperature 30.0 270 < th dose independent rect. 5 2
936 198.17 humidity 50.0 270 > th dose independent rect. 5 2
938 198.17 atmosphere 995.0 270 > th dose independent rect. 5 2
939 198.17 atmosphere 1015.0 270 < th dose independent rect. 5 2
941 198.17 temperature 10.0 270 > th dose independent rect. 7 22
944 198.19 temperature 10.0 90 > th dose dependent rect. 11 5
964 198.32 atmosphere 995.0 270 > th dose dependent rect. 5 2
974 198.39 wind 1.0 270 > th dose independent rect. 15 17