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Os10g0513200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Nodulin-26 (N-26).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0296) R2 : 0.923
β1 : -1.15 (0.109) R2dD : 0.0193 R2D : 0.0321
β2 : 2.03 (0.0845) R2dC : 0.132 R2C : 0.399
β3 : -5.18 (0.114) R2dE : 0.491 R2E : 0.772
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.129 (0.0632) R2dN8 : 0.00126 R2N8 : -2e-04
σ : 0.553
deviance : 140.94
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C
peak time of C : 9.84
E
wheather : temperature
threshold : 8.399
memory length : 675
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.1
open length of G : 10.6

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
137.18 0.55 10.3 -1.21 1.99 -5.14 0.634 -1.15 -0.15 9.87 9.189 694 7.05 10.4
137.5 0.546 10.3 -1.17 2.01 -5.13 0.973 -- -0.134 9.72 8.555 679 7.12 10.6
137.63 0.546 10.3 -1.27 2.01 -5.06 -- -1.86 -0.189 9.71 8.033 680 7.17 10.5
140.94 0.553 10.3 -1.15 2.03 -5.18 -- -- -0.129 9.84 8.399 675 7.1 10.6
159.68 0.589 10.4 -1.27 -- -6.36 -- -1.18 -0.203 -- -0.8222 668 9.2 9.33
226.62 0.706 10.3 -1.75 5.35 -- 2.49 -- -0.366 7.4 -- -- -- --
243.56 0.731 10.3 -1.69 5.36 -- -- -- -0.37 7.4 -- -- -- --
163.72 0.596 10.4 -1.22 -- -6.37 -- -- -0.178 -- -0.58 670 9.18 9.32
173.24 0.613 10.3 -- 2.07 -5.44 -- -- 0.00147 10 9.863 669 6.85 11
1771.32 1.97 10.4 -1.61 -- -- -- -- -0.283 -- -- -- -- --
319.26 0.836 10.2 -- 5.34 -- -- -- -0.181 7.42 -- -- -- --
199.42 0.658 10.3 -- -- -6.57 -- -- -0.014 -- 4.64 673 9.13 9.37
1839.53 2 10.4 -- -- -- -- -- -0.105 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 140.06 temperature 10 720 > th dose dependent rect. 7 10
9 146.23 temperature 10 720 > th dose dependent rect. 7 3
12 147.60 temperature 25 270 > th dose dependent rect. 14 20
15 148.82 temperature 10 720 > th dose dependent rect. 6 5
32 151.45 temperature 10 270 > th dose dependent rect. 14 11
59 154.03 temperature 30 270 < th dose dependent rect. 10 11
64 154.49 temperature 25 270 > th dose dependent rect. 14 11
69 154.74 temperature 20 270 > th dose dependent rect. 15 2
71 154.90 temperature 20 10 > th dose dependent rect. 16 12
99 155.85 temperature 30 720 < th dose dependent rect. 10 4
108 156.06 temperature 20 270 > th dose dependent rect. 14 4
115 156.49 temperature 20 10 > th dose dependent rect. 16 4
121 156.86 temperature 30 720 < th dose dependent rect. 11 2
125 156.90 radiation 10 270 > th dose dependent rect. 15 17
139 157.43 radiation 20 270 > th dose independent rect. 15 17
146 157.54 temperature 20 270 > th dose dependent sin 20 NA
149 157.64 temperature 25 10 > th dose independent rect. 16 4
187 158.63 radiation 1 270 < th dose independent rect. 15 14
213 159.26 temperature 25 270 > th dose dependent sin 16 NA
236 159.89 temperature 25 90 > th dose independent rect. 16 3
247 160.14 temperature 25 90 > th dose dependent sin 13 NA
257 160.28 temperature 10 270 > th dose dependent rect. 13 22
273 160.48 temperature 10 720 > th dose dependent rect. 15 2
276 160.53 radiation 30 270 < th dose dependent sin 13 NA
277 160.54 radiation 1 270 > th dose dependent rect. 15 3
280 160.60 radiation 1 270 > th dose dependent rect. 15 14
294 160.74 temperature 25 270 > th dose independent rect. 14 4
304 160.85 temperature 25 720 > th dose dependent rect. 24 17
313 160.91 radiation 10 270 > th dose independent sin 13 NA
331 161.21 humidity 50 720 > th dose independent rect. 17 14
332 161.21 radiation 1 270 < th dose independent rect. 8 21
364 161.60 radiation 20 270 > th dose independent rect. 15 2
431 162.22 radiation 1 270 > th dose dependent sin 13 NA
434 162.28 radiation 1 270 > th dose dependent rect. 14 19
460 162.78 radiation 1 270 < th dose dependent rect. 15 14
496 163.21 temperature 20 720 > th dose dependent sin 1 NA
509 163.48 temperature 30 720 < th dose independent rect. 11 3
528 163.71 temperature 25 720 > th dose dependent sin 3 NA
561 164.15 temperature 30 270 < th dose independent rect. 10 12
598 164.60 humidity 90 10 < th dose dependent rect. 16 10
623 164.95 radiation 1 270 > th dose independent rect. 13 22
630 165.10 temperature 10 720 > th dose dependent rect. 23 19
631 165.10 radiation 1 270 < th dose dependent rect. 6 23
700 165.86 temperature 30 270 < th dose dependent sin 20 NA
767 166.49 radiation 20 270 > th dose independent rect. 14 19
810 166.91 radiation 1 270 < th dose independent rect. 15 20
812 166.91 temperature 30 720 < th dose dependent rect. 4 12
868 167.46 radiation 1 270 < th dose dependent rect. 15 20
871 167.50 temperature 20 270 > th dose dependent rect. 6 19
893 167.72 temperature 25 720 > th dose dependent rect. 4 7
898 167.74 humidity 90 10 < th dose dependent rect. 16 5
935 168.03 radiation 40 720 < th dose dependent rect. 17 14
939 168.05 humidity 90 90 < th dose dependent rect. 15 20
964 168.23 temperature 25 720 > th dose independent rect. 6 12
993 168.48 humidity 90 270 < th dose dependent rect. 14 11