Os01g0112400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major intrinsic protein family protein.
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Os01g0112400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major intrinsic protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.01 | 0.653 | 2.99 | -0.0945 | 0.105 | 0.492 | 0.406 | 0.953 | 0.0305 | 17.4 | 1015 | 4380 | -- | -- |
| 194.08 | 0.649 | 2.98 | 0.0661 | 0.124 | 0.401 | 0.477 | -- | 0.0778 | 17.6 | 1014 | 5487 | -- | -- |
| 193.31 | 0.648 | 2.99 | -0.0944 | 0.116 | 0.519 | -- | 1.04 | 0.0338 | 18.3 | 1015 | 4371 | -- | -- |
| 194.66 | 0.65 | 2.98 | 0.0802 | 0.12 | 0.398 | -- | -- | 0.0784 | 18.4 | 1014 | 5499 | -- | -- |
| 193.99 | 0.649 | 2.99 | -0.102 | -- | 0.518 | -- | 1.04 | 0.0292 | -- | 1015 | 4371 | -- | -- |
| 200.38 | 0.664 | 2.99 | -0.00226 | 0.127 | -- | 0.452 | -- | 0.00102 | 17.7 | -- | -- | -- | -- |
| 200.81 | 0.664 | 2.99 | -0.00594 | 0.135 | -- | -- | -- | 0.00246 | 18.7 | -- | -- | -- | -- |
| 195.46 | 0.651 | 2.97 | 0.0626 | -- | 0.398 | -- | -- | 0.0742 | -- | 1014 | 5487 | -- | -- |
| 194.74 | 0.65 | 2.98 | -- | 0.128 | 0.393 | -- | -- | 0.0691 | 18.8 | 1014 | 5363 | -- | -- |
| 201.76 | 0.664 | 2.99 | -0.00902 | -- | -- | -- | -- | -0.000199 | -- | -- | -- | -- | -- |
| 200.81 | 0.663 | 2.99 | -- | 0.135 | -- | -- | -- | 0.00312 | 18.7 | -- | -- | -- | -- |
| 195.56 | 0.651 | 2.98 | -- | -- | 0.394 | -- | -- | 0.0653 | -- | 1014 | 5396 | -- | -- |
| 201.76 | 0.663 | 2.99 | -- | -- | -- | -- | -- | 0.000802 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.40 | wind | 1.0 | 30 | < th | dose dependent | rect. | 21 | 2 |
| 7 | 187.89 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 3 |
| 27 | 187.89 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 60 | 188.11 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 5 |
| 62 | 188.12 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 72 | 188.12 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 85 | 188.60 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 10 |
| 89 | 188.77 | wind | 1.0 | 10 | < th | dose dependent | rect. | 12 | 10 |
| 100 | 188.98 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 118 | 189.23 | humidity | 70.0 | 720 | > th | dose independent | rect. | 10 | 3 |
| 123 | 189.31 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 125 | 189.47 | wind | 3.0 | 90 | > th | dose independent | rect. | 7 | 2 |
| 126 | 189.47 | humidity | 70.0 | 720 | > th | dose independent | rect. | 20 | 18 |
| 128 | 189.64 | humidity | 70.0 | 720 | > th | dose independent | rect. | 2 | 12 |
| 133 | 189.83 | temperature | 25.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 135 | 189.85 | wind | 7.0 | 10 | > th | dose independent | rect. | 21 | 7 |
| 136 | 189.86 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 17 |
| 142 | 189.87 | wind | 7.0 | 10 | > th | dose dependent | rect. | 21 | 7 |
| 148 | 189.88 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 10 |
| 149 | 189.90 | wind | 7.0 | 30 | > th | dose independent | rect. | 21 | 1 |
| 153 | 189.90 | wind | 7.0 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 215 | 189.98 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 17 |
| 231 | 190.09 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 364 | 190.23 | wind | 9.0 | 90 | > th | dose dependent | rect. | 18 | 4 |
| 366 | 190.25 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 367 | 190.25 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 401 | 190.35 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 402 | 190.36 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 2 | 12 |
| 403 | 190.37 | humidity | 90.0 | 270 | < th | dose independent | rect. | 5 | 3 |
| 410 | 190.39 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 423 | 190.49 | temperature | 25.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 476 | 190.66 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 506 | 190.71 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 511 | 190.73 | temperature | 25.0 | 90 | < th | dose independent | rect. | 17 | 5 |
| 519 | 190.76 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 521 | 190.76 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 530 | 190.77 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 616 | 191.00 | temperature | 25.0 | 10 | < th | dose independent | rect. | 17 | 6 |
| 626 | 191.03 | wind | 3.0 | 10 | > th | dose independent | rect. | 1 | 10 |
| 629 | 191.03 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 705 | 191.19 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 729 | 191.27 | humidity | 80.0 | 720 | < th | dose independent | sin | 5 | NA |
| 736 | 191.30 | temperature | 25.0 | 90 | < th | dose independent | rect. | 19 | 3 |
| 744 | 191.32 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 755 | 191.35 | wind | 3.0 | 90 | > th | dose independent | rect. | 1 | 9 |
| 783 | 191.40 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 821 | 191.46 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 7 |
| 828 | 191.48 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 5 | 9 |
| 858 | 191.53 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 10 |
| 863 | 191.54 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 8 |
| 875 | 191.56 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 877 | 191.57 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 908 | 191.60 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 935 | 191.64 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 946 | 191.65 | wind | 5.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 956 | 191.67 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 973 | 191.69 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 995 | 191.73 | humidity | 70.0 | 720 | > th | dose independent | sin | 6 | NA |