BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0611900 Os12g0611900|AK101128
(364 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0611900 Glycosyl transferase, family 17 protein 733 0.0
Os04g0477500 Glycosyl transferase, family 17 protein 400 e-112
Os02g0594900 Glycosyl transferase, family 17 protein 395 e-110
Os02g0595100 Glycosyl transferase, family 17 protein 394 e-110
>Os12g0611900 Glycosyl transferase, family 17 protein
Length = 364
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/364 (96%), Positives = 353/364 (96%)
Query: 1 MARTSPFPPLTRRKIASLKLLIPCXXXXXXXXXXXTQYFHNISYLLRPLWDTPPKPFIRI 60
MARTSPFPPLTRRKIASLKLLIPC TQYFHNISYLLRPLWDTPPKPFIRI
Sbjct: 1 MARTSPFPPLTRRKIASLKLLIPCVLVLSVAVIVVTQYFHNISYLLRPLWDTPPKPFIRI 60
Query: 61 PHYYAPNISMPQLCQLHGWGILPTPRRVFDAVLFSNELDILEIRYGELLPYVDRFVILEA 120
PHYYAPNISMPQLCQLHGWGILPTPRRVFDAVLFSNELDILEIRYGELLPYVDRFVILEA
Sbjct: 61 PHYYAPNISMPQLCQLHGWGILPTPRRVFDAVLFSNELDILEIRYGELLPYVDRFVILEA 120
Query: 121 NATFTGIPKSLSFLENINRFAFAGSKIVYDMLPVMEMDPGSHRQPFHVEAGHRRALNMLL 180
NATFTGIPKSLSFLENINRFAFAGSKIVYDMLPVMEMDPGSHRQPFHVEAGHRRALNMLL
Sbjct: 121 NATFTGIPKSLSFLENINRFAFAGSKIVYDMLPVMEMDPGSHRQPFHVEAGHRRALNMLL 180
Query: 181 RRSGIAVGDVLIMADADEIPSPETVQLLKWCDGIPQVMHLELKNYMYSFEFPIDYNSWRA 240
RRSGIAVGDVLIMADADEIPSPETVQLLKWCDGIPQVMHLELKNYMYSFEFPIDYNSWRA
Sbjct: 181 RRSGIAVGDVLIMADADEIPSPETVQLLKWCDGIPQVMHLELKNYMYSFEFPIDYNSWRA 240
Query: 241 TAHVFTEHTLYRHSRQSNLLLADAGWHCSFCFKDIKEFAFKMKAYSHADRVKQDSFLNPD 300
TAHVFTEHTLYRHSRQSNLLLADAGWHCSFCFKDIKEFAFKMKAYSHADRVKQDSFLNPD
Sbjct: 241 TAHVFTEHTLYRHSRQSNLLLADAGWHCSFCFKDIKEFAFKMKAYSHADRVKQDSFLNPD 300
Query: 301 RIQRVICNGEDLFDMLPEEYTFKDLFKKMGPIPKSGSAVHLPSYLIKNADKFRFLLPGGC 360
RIQRVICNGEDLFDMLPEEYTFKDLFKKMGPIPKSGSAVHLPSYLIKNADKFRFLLPGGC
Sbjct: 301 RIQRVICNGEDLFDMLPEEYTFKDLFKKMGPIPKSGSAVHLPSYLIKNADKFRFLLPGGC 360
Query: 361 LRPG 364
LRPG
Sbjct: 361 LRPG 364
>Os04g0477500 Glycosyl transferase, family 17 protein
Length = 388
Score = 400 bits (1028), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 245/324 (75%), Gaps = 4/324 (1%)
Query: 40 HNISYLLRPLWDTPPKPFIRIPHYYAPNISMPQLCQLHGWGILPTPRRVFDAVLFSNELD 99
++Y LRP+W++PPKPF IPHYY N++M +LC+LHGW + TPRRVFDAVLFSNELD
Sbjct: 65 QKVTYFLRPIWESPPKPFKTIPHYYHENVTMAKLCKLHGWKVRETPRRVFDAVLFSNELD 124
Query: 100 ILEIRYGELLPYVDRFVILEANATFTGIPKSLSFLENINRFAFAGSKIVYDMLPVMEMDP 159
ILEIR+ EL PYV FV+LE+N+TFTG+ K L F EN +RF FA S++ Y M+ +
Sbjct: 125 ILEIRWNELSPYVSEFVLLESNSTFTGLKKPLHFKENRHRFGFAESRLTYGMIGGRFV-- 182
Query: 160 GSHRQPFHVEAGHRRALNMLLRRSGIAVGDVLIMADADEIPSPETVQLLKWCDGIPQVMH 219
PF E+ R AL+ L++ + I D+LIM+D DEIPS T+ LL+WCD IP+++H
Sbjct: 183 -KGENPFVEESYQRVALDQLIKIAKIEDDDLLIMSDVDEIPSGHTIDLLRWCDDIPEILH 241
Query: 220 LELKNYMYSFEFPIDYNSWRATAHVF-TEHTLYRHSRQSNLLLADAGWHCSFCFKDIKEF 278
L+L+NY+YSFEF +D SWRA+ H + + T Y H RQ++ LLAD+GWHCSFCF+ I +F
Sbjct: 242 LQLRNYLYSFEFFLDDKSWRASIHRYRSGKTRYAHFRQTDELLADSGWHCSFCFRYISDF 301
Query: 279 AFKMKAYSHADRVKQDSFLNPDRIQRVICNGEDLFDMLPEEYTFKDLFKKMGPIPKSGSA 338
AFKM+AYSH DR++ FLNP+RIQ VIC G DLFDMLPEEYTF+++ K+GPIP + SA
Sbjct: 302 AFKMQAYSHVDRIRFKYFLNPERIQDVICRGADLFDMLPEEYTFQEIIAKLGPIPSTFSA 361
Query: 339 VHLPSYLIKNADKFRFLLPGGCLR 362
VHLPSYL++N D++R+LLPG C R
Sbjct: 362 VHLPSYLLQNVDRYRYLLPGYCRR 385
>Os02g0594900 Glycosyl transferase, family 17 protein
Length = 391
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/324 (56%), Positives = 239/324 (73%), Gaps = 4/324 (1%)
Query: 40 HNISYLLRPLWDTPPKPFIRIPHYYAPNISMPQLCQLHGWGILPTPRRVFDAVLFSNELD 99
++Y LRP+W+ PPKPF +PHYY N+SM LC+LHGW + TPRRVFDAVLFSNELD
Sbjct: 68 QKVTYFLRPIWEKPPKPFNVLPHYYHENVSMANLCKLHGWKVRETPRRVFDAVLFSNELD 127
Query: 100 ILEIRYGELLPYVDRFVILEANATFTGIPKSLSFLENINRFAFAGSKIVYDMLPVMEMDP 159
IL+IR+ EL PYV FV+LE+N+TFTG+ K L F EN RF FA S++ Y M+ +
Sbjct: 128 ILDIRWHELSPYVSEFVLLESNSTFTGLKKDLHFKENRQRFEFAESRLTYGMIGGRFVKG 187
Query: 160 GSHRQPFHVEAGHRRALNMLLRRSGIAVGDVLIMADADEIPSPETVQLLKWCDGIPQVMH 219
PF E+ R AL+ L++ +GI D+LIM+D DEIPS T+ LL+WCD P+V+H
Sbjct: 188 ---ENPFVEESYQRVALDQLIKIAGITDDDLLIMSDVDEIPSGHTINLLRWCDDTPEVLH 244
Query: 220 LELKNYMYSFEFPIDYNSWRATAHVF-TEHTLYRHSRQSNLLLADAGWHCSFCFKDIKEF 278
L+L+NY+YSF+F +D SWRA+ H + T Y H RQ++ LLAD+GWHCSFCF+ I +F
Sbjct: 245 LQLRNYLYSFQFLLDDKSWRASIHRYRAGKTRYAHFRQTDDLLADSGWHCSFCFRHINDF 304
Query: 279 AFKMKAYSHADRVKQDSFLNPDRIQRVICNGEDLFDMLPEEYTFKDLFKKMGPIPKSGSA 338
FKM+AYSH DR++ FLNP RIQ VIC G DLFDMLPEEYTF+++ K+GPIP + SA
Sbjct: 305 VFKMQAYSHVDRIRFKYFLNPKRIQHVICQGADLFDMLPEEYTFQEIIAKLGPIPSTFSA 364
Query: 339 VHLPSYLIKNADKFRFLLPGGCLR 362
VHLP+YL++ D++R+LLPG C+R
Sbjct: 365 VHLPAYLLEKMDQYRYLLPGNCMR 388
>Os02g0595100 Glycosyl transferase, family 17 protein
Length = 358
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/328 (56%), Positives = 241/328 (73%), Gaps = 6/328 (1%)
Query: 38 YFHN--ISYLLRPLWDTPPKPFIRIPHYYAPNISMPQLCQLHGWGILPTPRRVFDAVLFS 95
Y H ++Y LRP+W+ PPKPF +PHYY N+SM LC+LHGW + TPRRVFDAVLFS
Sbjct: 31 YLHGQKVTYFLRPIWEKPPKPFKVLPHYYNENVSMANLCKLHGWKVRETPRRVFDAVLFS 90
Query: 96 NELDILEIRYGELLPYVDRFVILEANATFTGIPKSLSFLENINRFAFAGSKIVYDMLPVM 155
NELDIL+IR+ EL PYV FV+LE+N+TFTG+ K L F EN RF FA S++ Y M+
Sbjct: 91 NELDILDIRWHELSPYVSEFVLLESNSTFTGLKKDLHFKENRQRFEFAESRLTYGMIGGR 150
Query: 156 EMDPGSHRQPFHVEAGHRRALNMLLRRSGIAVGDVLIMADADEIPSPETVQLLKWCDGIP 215
+ PF E+ R AL+ L++ +GI D+LIM+D DEIPS T+ LL+WCD IP
Sbjct: 151 FV---KGENPFVEESYQRVALDQLIKIAGITDDDLLIMSDVDEIPSGHTINLLRWCDDIP 207
Query: 216 QVMHLELKNYMYSFEFPIDYNSWRATAHVF-TEHTLYRHSRQSNLLLADAGWHCSFCFKD 274
+V+HL+L+NY+YSFEF +D SWRA+ H + T Y H RQ++ LLAD+GWHCSFCF+
Sbjct: 208 EVLHLQLRNYLYSFEFFLDDKSWRASIHRYRAGKTRYAHFRQTDDLLADSGWHCSFCFRY 267
Query: 275 IKEFAFKMKAYSHADRVKQDSFLNPDRIQRVICNGEDLFDMLPEEYTFKDLFKKMGPIPK 334
I +F FKM+AYSH DR++ FLNP RIQ VIC G DLFDMLPEEYTF+++ K+GPIP
Sbjct: 268 ISDFVFKMQAYSHVDRIRFKYFLNPKRIQHVICRGADLFDMLPEEYTFQEIIAKLGPIPS 327
Query: 335 SGSAVHLPSYLIKNADKFRFLLPGGCLR 362
+ SAVHLP+YL++ D++ +LLPG C+R
Sbjct: 328 TFSAVHLPAYLLEKVDQYSYLLPGRCMR 355
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.142 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,064,382
Number of extensions: 562697
Number of successful extensions: 1353
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1347
Number of HSP's successfully gapped: 4
Length of query: 364
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 262
Effective length of database: 11,709,973
Effective search space: 3068012926
Effective search space used: 3068012926
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)