Os02g0595100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 17 protein.
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Os02g0595100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 17 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.66 | 0.445 | 10.6 | 0.454 | 1.01 | -0.944 | 0.011 | 2.21 | 0.0413 | 19.5 | 23.34 | 512 | -- | -- |
| 90.74 | 0.444 | 10.7 | 0.0281 | 0.982 | -0.783 | 0.586 | -- | -0.144 | 19.6 | 26 | 580 | -- | -- |
| 89.66 | 0.441 | 10.6 | 0.455 | 1.01 | -0.945 | -- | 2.22 | 0.0414 | 19.5 | 23.35 | 513 | -- | -- |
| 91.38 | 0.445 | 10.7 | 0.035 | 0.973 | -0.75 | -- | -- | -0.14 | 19.5 | 25.74 | 557 | -- | -- |
| 119.48 | 0.509 | 10.6 | 0.464 | -- | -0.473 | -- | 1.27 | 0.0176 | -- | 21.34 | 2778 | -- | -- |
| 101.52 | 0.472 | 10.7 | -0.0937 | 0.664 | -- | 0.233 | -- | -0.176 | 20.1 | -- | -- | -- | -- |
| 101.67 | 0.472 | 10.7 | -0.0998 | 0.664 | -- | -- | -- | -0.176 | 20 | -- | -- | -- | -- |
| 118.62 | 0.507 | 10.7 | 0.0454 | -- | -0.425 | -- | -- | -0.105 | -- | 23.4 | 1407 | -- | -- |
| 91.41 | 0.445 | 10.7 | -- | 0.968 | -0.742 | -- | -- | -0.144 | 19.5 | 25.79 | 557 | -- | -- |
| 125.79 | 0.524 | 10.7 | -0.106 | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
| 101.93 | 0.472 | 10.7 | -- | 0.665 | -- | -- | -- | -0.165 | 20 | -- | -- | -- | -- |
| 118.62 | 0.507 | 10.7 | -- | -- | -0.431 | -- | -- | -0.094 | -- | 22.41 | 1410 | -- | -- |
| 126.09 | 0.524 | 10.7 | -- | -- | -- | -- | -- | -0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.02 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 2 | 85.79 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 5 | 86.00 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 9 | 86.13 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 14 | 86.25 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 17 | 86.30 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 31 | 86.72 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 35 | 86.79 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 36 | 86.79 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 51 | 87.03 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 7 |
| 71 | 87.19 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 8 |
| 74 | 87.21 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 83 | 87.32 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 104 | 87.44 | wind | 3 | 43200 | > th | dose dependent | rect. | 12 | 9 |
| 117 | 87.48 | temperature | 20 | 90 | > th | dose dependent | rect. | 16 | 6 |
| 128 | 87.54 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 141 | 87.62 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 144 | 87.62 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 162 | 87.69 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 176 | 87.78 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 199 | 87.85 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 200 | 87.86 | radiation | 10 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 214 | 87.92 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 216 | 87.92 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 228 | 87.98 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 293 | 88.08 | radiation | 40 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 296 | 88.09 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 298 | 88.09 | radiation | 10 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 303 | 88.12 | temperature | 20 | 270 | > th | dose dependent | sin | 18 | NA |
| 376 | 88.21 | wind | 3 | 43200 | > th | dose dependent | sin | 20 | NA |
| 379 | 88.21 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 12 |
| 384 | 88.23 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 401 | 88.24 | radiation | 20 | 43200 | > th | dose independent | sin | 9 | NA |
| 473 | 88.32 | radiation | 40 | 43200 | > th | dose independent | sin | 10 | NA |
| 495 | 88.33 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 502 | 88.35 | wind | 5 | 43200 | < th | dose independent | sin | 19 | NA |
| 538 | 88.39 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 553 | 88.42 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 646 | 88.51 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 20 |
| 725 | 88.57 | wind | 9 | 43200 | < th | dose dependent | sin | 21 | NA |
| 730 | 88.58 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 731 | 88.58 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 802 | 88.64 | wind | 5 | 43200 | > th | dose independent | sin | 19 | NA |
| 847 | 88.68 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 849 | 88.69 | radiation | 20 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 855 | 88.70 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 910 | 88.74 | radiation | 10 | 43200 | > th | dose dependent | sin | 8 | NA |
| 950 | 88.77 | temperature | 20 | 10 | > th | dose dependent | sin | 15 | NA |
| 956 | 88.78 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |