Os02g0594900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 17 protein.
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Os02g0594900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 17 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.97 | 0.293 | 11.5 | 0.493 | 0.413 | -1.01 | 0.246 | 0.891 | 0.0193 | 22.2 | 24.1 | 45 | -- | -- |
| 39.31 | 0.292 | 11.5 | 0.382 | 0.425 | -0.942 | 0.143 | -- | -0.00738 | 22.1 | 24.08 | 56 | -- | -- |
| 39.05 | 0.291 | 11.5 | 0.493 | 0.424 | -1.04 | -- | 0.86 | 0.0242 | 21.8 | 24.1 | 58 | -- | -- |
| 39.39 | 0.292 | 11.5 | 0.379 | 0.425 | -0.958 | -- | -- | -0.0121 | 22 | 24.1 | 56 | -- | -- |
| 47.46 | 0.323 | 11.5 | 0.494 | -- | -1.17 | -- | 0.805 | 0.0383 | -- | 24.05 | 40 | -- | -- |
| 52.71 | 0.34 | 11.6 | 0.227 | 0.63 | -- | 0.595 | -- | -0.124 | 0.742 | -- | -- | -- | -- |
| 54.16 | 0.345 | 11.6 | 0.206 | 0.628 | -- | -- | -- | -0.126 | 0.536 | -- | -- | -- | -- |
| 47.68 | 0.322 | 11.5 | 0.396 | -- | -1.11 | -- | -- | 0.0197 | -- | 23.99 | 9 | -- | -- |
| 42.87 | 0.305 | 11.6 | -- | 0.436 | -0.861 | -- | -- | -0.0646 | 22.4 | 24.16 | 53 | -- | -- |
| 78.91 | 0.415 | 11.6 | 0.228 | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
| 55.28 | 0.348 | 11.6 | -- | 0.631 | -- | -- | -- | -0.149 | 0.553 | -- | -- | -- | -- |
| 51.67 | 0.335 | 11.5 | -- | -- | -1.06 | -- | -- | -0.041 | -- | 24.1 | 7 | -- | -- |
| 80.28 | 0.418 | 11.6 | -- | -- | -- | -- | -- | -0.141 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 3 | 34.86 | temperature | 30 | 10 | < th | dose dependent | sin | 20 | NA |
| 14 | 35.52 | temperature | 10 | 10 | > th | dose dependent | sin | 21 | NA |
| 23 | 35.76 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 10 |
| 65 | 36.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 69 | 36.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 73 | 36.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 109 | 37.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 9 |
| 121 | 37.57 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 10 |
| 160 | 37.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 186 | 38.20 | temperature | 25 | 30 | < th | dose independent | sin | 20 | NA |
| 202 | 38.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 5 |
| 250 | 38.67 | temperature | 25 | 30 | > th | dose independent | sin | 21 | NA |
| 265 | 38.79 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 12 |
| 291 | 38.86 | temperature | 25 | 10 | < th | dose independent | rect. | 12 | 8 |
| 356 | 39.15 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 2 |
| 378 | 39.24 | temperature | 25 | 10 | > th | dose independent | rect. | 8 | 14 |
| 471 | 39.52 | temperature | 25 | 30 | > th | dose dependent | rect. | 4 | 21 |
| 478 | 39.54 | temperature | 25 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 482 | 39.55 | temperature | 25 | 30 | > th | dose dependent | no | NA | NA |
| 558 | 39.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 7 |
| 631 | 39.79 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 747 | 40.03 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 16 |
| 755 | 40.04 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 760 | 40.06 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 18 |
| 789 | 40.13 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 19 |
| 871 | 40.31 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 908 | 40.38 | temperature | 25 | 90 | > th | dose dependent | rect. | 15 | 23 |