BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0594900 Os02g0594900|AK060490
(391 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G14480.1 | chr5:4667984-4669693 FORWARD LENGTH=388 590 e-169
AT3G27540.1 | chr3:10205489-10206888 FORWARD LENGTH=391 582 e-167
AT1G12990.1 | chr1:4433973-4435552 FORWARD LENGTH=393 582 e-167
AT3G01620.1 | chr3:235327-236729 REVERSE LENGTH=389 571 e-163
AT1G67880.1 | chr1:25454081-25455453 REVERSE LENGTH=391 553 e-158
AT2G13290.1 | chr2:5512058-5513143 FORWARD LENGTH=362 424 e-119
AT3G26445.1 | chr3:9680120-9680746 REVERSE LENGTH=119 112 2e-25
>AT5G14480.1 | chr5:4667984-4669693 FORWARD LENGTH=388
Length = 387
Score = 590 bits (1521), Expect = e-169, Method: Compositional matrix adjust.
Identities = 270/387 (69%), Positives = 321/387 (82%), Gaps = 3/387 (0%)
Query: 5 GYYNCKKNDXXXXXXXXXXSEHGSKAILSMSRLKCALRGFDLRALLILLIGVPALIFIIY 64
GYY+ KK D + GS+A + SR++C LRGFD + + VP IF +Y
Sbjct: 4 GYYSSKKTDDICDDVC---GQDGSRAAKAFSRVRCVLRGFDFKTYIFFFTIVPIFIFGVY 60
Query: 65 VHGQKVTYFLRPIWEKPPKPFNVLPHYYHENVSMANLCKLHGWKVRETPRRVFDAVLFSN 124
+HGQK+TYFLRP+WE PPKPF LPHYYHEN SMA LC LHGWK RE+PRRVFDAVLFSN
Sbjct: 61 LHGQKLTYFLRPLWESPPKPFQTLPHYYHENASMATLCSLHGWKHRESPRRVFDAVLFSN 120
Query: 125 ELDILDIRWHELSPYVSEFVLLESNSTFTGLKKDLHFKENRQRFEFAESRLTYGMIGGRF 184
E+D+L IRW EL PY+++FV+LESNSTFTGL K L F NR +FEFAE RL+YG I GRF
Sbjct: 121 EVDMLTIRWKELYPYITQFVILESNSTFTGLPKPLVFNGNRAKFEFAEPRLSYGNIAGRF 180
Query: 185 VKGENPFVEESYQRVALDQLIKIAGITDDDLLIMSDVDEIPSGHTINLLRWCDDTPEVLH 244
KGENPFVEE+YQR+ALDQLI++AGI +DDLLIMSDVDEIPS HTINLLRWCD P +LH
Sbjct: 181 KKGENPFVEEAYQRIALDQLIRLAGIEEDDLLIMSDVDEIPSAHTINLLRWCDGYPPILH 240
Query: 245 LQLRNYLYSFQFLLDDKSWRASIHRYRAGKTRYAHFRQTDDLLADSGWHCSFCFRHINDF 304
LQL+NYLYSF++ +D+KSWRASIH+Y+ GKTRYAHFRQ + LLADSGWHCSFCFRHI++F
Sbjct: 241 LQLKNYLYSFEYFVDNKSWRASIHQYKPGKTRYAHFRQGNTLLADSGWHCSFCFRHISEF 300
Query: 305 VFKMQAYSHVDRIRFKYFLNPKRIQHVICQGADLFDMLPEEYTFQEIIAKLGPIPSTFSA 364
+FKM+AYSH DR+RF ++LNPKRIQ VIC+G DLFDMLPEEYTF+EII KLGPIP ++SA
Sbjct: 301 IFKMKAYSHNDRVRFSHYLNPKRIQDVICKGTDLFDMLPEEYTFREIIGKLGPIPRSYSA 360
Query: 365 VHLPAYLLEKMDQYRYLLPGNCMRESG 391
VHLPA+L+EK + Y+YLLPGNC+RESG
Sbjct: 361 VHLPAHLIEKAESYKYLLPGNCIRESG 387
>AT3G27540.1 | chr3:10205489-10206888 FORWARD LENGTH=391
Length = 390
Score = 582 bits (1501), Expect = e-167, Method: Compositional matrix adjust.
Identities = 266/387 (68%), Positives = 320/387 (82%), Gaps = 4/387 (1%)
Query: 3 AAGYYNCKKNDXXXXXXXXXXSEHGSKAILSMSRLKCALRGFDLRALLILLIGVPALIFI 62
+ GY N KK D GSKA ++SRLKC L+GFDLR L L + +P I
Sbjct: 2 SDGYINSKKTDDICEDV----CGQGSKAAKTISRLKCVLKGFDLRTYLFLFVLMPFGILA 57
Query: 63 IYVHGQKVTYFLRPIWEKPPKPFNVLPHYYHENVSMANLCKLHGWKVRETPRRVFDAVLF 122
IY+HGQK TYF RP+WE PPKPF +PHYY+ENV+M +LC LHGW +R++PRRVFDAVLF
Sbjct: 58 IYLHGQKFTYFFRPLWESPPKPFQTIPHYYNENVTMESLCSLHGWGIRDSPRRVFDAVLF 117
Query: 123 SNELDILDIRWHELSPYVSEFVLLESNSTFTGLKKDLHFKENRQRFEFAESRLTYGMIGG 182
SNE D+L +RW+EL PYV++FV+LESNSTFTGL K L FK N+ +F+F E RLTYG IGG
Sbjct: 118 SNEKDLLTVRWNELYPYVTQFVILESNSTFTGLPKPLVFKSNKDQFKFVEPRLTYGTIGG 177
Query: 183 RFVKGENPFVEESYQRVALDQLIKIAGITDDDLLIMSDVDEIPSGHTINLLRWCDDTPEV 242
RF KGENPFVEE+YQRVALDQL++IAGI +DDLLIMSDVDEIPS HTINLLRWCDD P V
Sbjct: 178 RFRKGENPFVEEAYQRVALDQLLRIAGIQEDDLLIMSDVDEIPSAHTINLLRWCDDIPPV 237
Query: 243 LHLQLRNYLYSFQFLLDDKSWRASIHRYRAGKTRYAHFRQTDDLLADSGWHCSFCFRHIN 302
LHLQL+NYLYSF++ +D KSWRASIHRY GKTRYAHFRQ++ +LADSGWHCSFCFR+I+
Sbjct: 238 LHLQLKNYLYSFEYYVDSKSWRASIHRYSPGKTRYAHFRQSNVMLADSGWHCSFCFRYIS 297
Query: 303 DFVFKMQAYSHVDRIRFKYFLNPKRIQHVICQGADLFDMLPEEYTFQEIIAKLGPIPSTF 362
+F+FKM+AYSH DR+RF ++LNP+RIQ VIC+G DLFDMLPEEYTF+EII K+GP+P ++
Sbjct: 298 EFIFKMKAYSHSDRVRFSHYLNPRRIQDVICKGTDLFDMLPEEYTFKEIIGKMGPVPRSY 357
Query: 363 SAVHLPAYLLEKMDQYRYLLPGNCMRE 389
SAVHLP+YLL +QY+YLLPGNC+RE
Sbjct: 358 SAVHLPSYLLYNAEQYKYLLPGNCIRE 384
>AT1G12990.1 | chr1:4433973-4435552 FORWARD LENGTH=393
Length = 392
Score = 582 bits (1501), Expect = e-167, Method: Compositional matrix adjust.
Identities = 270/389 (69%), Positives = 324/389 (83%), Gaps = 4/389 (1%)
Query: 2 EAAGYYNCKKNDXXXXXXXXXXSEHGSKAILSMSRLKCALRGFDLRALLILLIGVPALIF 61
EA G+Y KK D E G S SRL CALRG D++ + LL+ VP +
Sbjct: 7 EAGGHYCSKKTDDICGGVCS--QEPGR--FFSFSRLCCALRGVDMKTYIFLLVIVPTCVL 62
Query: 62 IIYVHGQKVTYFLRPIWEKPPKPFNVLPHYYHENVSMANLCKLHGWKVRETPRRVFDAVL 121
YVHGQK++YFLRP+WE PPKPF+ +PHYYHEN SM LCKLHGW VR+ PRRV+DAVL
Sbjct: 63 AGYVHGQKISYFLRPLWESPPKPFHDIPHYYHENASMETLCKLHGWGVRDYPRRVYDAVL 122
Query: 122 FSNELDILDIRWHELSPYVSEFVLLESNSTFTGLKKDLHFKENRQRFEFAESRLTYGMIG 181
FSNELDIL +RW EL PY+++FVLLESN+TFTGL K L F +R F+F ESRLTYG +G
Sbjct: 123 FSNELDILAVRWRELFPYITQFVLLESNTTFTGLPKPLVFAAHRDEFKFIESRLTYGTVG 182
Query: 182 GRFVKGENPFVEESYQRVALDQLIKIAGITDDDLLIMSDVDEIPSGHTINLLRWCDDTPE 241
GRFVKG+NPF EE+YQRVALDQL++IAGITDDDLL+MSDVDEIPS HTINLLRWCD+ P+
Sbjct: 183 GRFVKGQNPFYEEAYQRVALDQLLRIAGITDDDLLLMSDVDEIPSRHTINLLRWCDEIPK 242
Query: 242 VLHLQLRNYLYSFQFLLDDKSWRASIHRYRAGKTRYAHFRQTDDLLADSGWHCSFCFRHI 301
+LHL+L+NYLYSF+FL+D+KSWRASIHRY GKTRYAH+RQ+D++LAD+GWHCSFCFR I
Sbjct: 243 ILHLRLKNYLYSFEFLVDNKSWRASIHRYETGKTRYAHYRQSDEILADAGWHCSFCFRRI 302
Query: 302 NDFVFKMQAYSHVDRIRFKYFLNPKRIQHVICQGADLFDMLPEEYTFQEIIAKLGPIPST 361
++F+FKM+AYSH DR+RF +FLNPKR+Q VIC+GADLFDMLPEEYTF+EII K+GPIP +
Sbjct: 303 SEFIFKMKAYSHNDRVRFGHFLNPKRVQRVICKGADLFDMLPEEYTFKEIIGKMGPIPHS 362
Query: 362 FSAVHLPAYLLEKMDQYRYLLPGNCMRES 390
FSAVHLP+YLLE D+YR+LLPGNC+RES
Sbjct: 363 FSAVHLPSYLLENADKYRFLLPGNCIRES 391
>AT3G01620.1 | chr3:235327-236729 REVERSE LENGTH=389
Length = 388
Score = 571 bits (1471), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/390 (68%), Positives = 323/390 (82%), Gaps = 4/390 (1%)
Query: 3 AAGYYNCKKNDXXXXXXXXXXSEHGSKAILSMSRLKCALRGFDLRALLILLIGVPALIFI 62
+ GY + KK D + GS+A ++SRL+C LRG D + L L +P IF
Sbjct: 2 SDGYRSSKKTDTICEDVC---GQEGSRAGKAISRLRCVLRGLDFKTFLFLFTLLPLFIFG 58
Query: 63 IYVHGQKVTYFLRPIWEKPPKPFNVLPHYYHENVSMANLCKLHGWKVRETPRRVFDAVLF 122
IY+HGQK+TYFLRP+WE PPKPFN+LPHYYHEN SM LC LHGWK+RE+PRRVFDA LF
Sbjct: 59 IYLHGQKITYFLRPLWESPPKPFNILPHYYHENTSMELLCNLHGWKLRESPRRVFDAALF 118
Query: 123 SNELDILDIRWHELSPYVSEFVLLESNSTFTGLKKDLHFKENRQR-FEFAESRLTYGMIG 181
SNE+D+L +RW+EL+PY+++FVLLESNSTFTGL K L F +NR++ F+F E RLTYG +G
Sbjct: 119 SNEIDMLTLRWNELNPYITQFVLLESNSTFTGLSKQLAFADNREKNFKFVEPRLTYGNVG 178
Query: 182 GRFVKGENPFVEESYQRVALDQLIKIAGITDDDLLIMSDVDEIPSGHTINLLRWCDDTPE 241
GRF KGENPFVEES+QR+ALDQLIK+AGI +DDLLIMSDVDEIPSGHTINLLRWCD P
Sbjct: 179 GRFKKGENPFVEESFQRLALDQLIKLAGIKEDDLLIMSDVDEIPSGHTINLLRWCDGFPP 238
Query: 242 VLHLQLRNYLYSFQFLLDDKSWRASIHRYRAGKTRYAHFRQTDDLLADSGWHCSFCFRHI 301
+LHLQLRNYLYS+++ +D KSWRAS+H Y+ GKTR AHFRQ+++LL DSGWHCSFCFRHI
Sbjct: 239 ILHLQLRNYLYSYEYYVDSKSWRASVHLYKPGKTRCAHFRQSNNLLTDSGWHCSFCFRHI 298
Query: 302 NDFVFKMQAYSHVDRIRFKYFLNPKRIQHVICQGADLFDMLPEEYTFQEIIAKLGPIPST 361
NDFVFKM+AYSH DR+RF ++LNP+RIQ +IC+G DLFDMLPEE+TF+EII KLGPIP +
Sbjct: 299 NDFVFKMKAYSHTDRVRFLHYLNPRRIQDIICKGTDLFDMLPEEHTFREIIGKLGPIPRS 358
Query: 362 FSAVHLPAYLLEKMDQYRYLLPGNCMRESG 391
+SAVHLP YL++ D Y+YLLPGNC RESG
Sbjct: 359 YSAVHLPGYLIQNADSYKYLLPGNCKRESG 388
>AT1G67880.1 | chr1:25454081-25455453 REVERSE LENGTH=391
Length = 390
Score = 553 bits (1424), Expect = e-158, Method: Compositional matrix adjust.
Identities = 256/389 (65%), Positives = 320/389 (82%), Gaps = 8/389 (2%)
Query: 2 EAAGYYNCKKNDXXXXXXXXXXSEHGSKAILSMSRLKCALRGFDLRALLILLIGVPALIF 61
E G+Y KK+D S+ G +SRL C LRG DL+++L LL+ +P +
Sbjct: 7 ENGGHYCSKKSDDLCGTQE---SDRG----FGISRLCCILRGVDLKSVLFLLVIMPMCVL 59
Query: 62 IIYVHGQKVTYFLRPIWEKPPKPFNVLPHYYHENVSMANLCKLHGWKVRETPRRVFDAVL 121
+Y++ K++YFLRP+WE PPKPF+ +PHY+HEN SM +LCKLHGW+ RE PRRV+DAVL
Sbjct: 60 GVYINALKISYFLRPLWESPPKPFHEIPHYHHENASMESLCKLHGWRTREYPRRVYDAVL 119
Query: 122 FSNELDILDIRWHELSPYVSEFVLLESNSTFTGLKKDLHFKENRQRFEFAESRLTYGMIG 181
FS E+++L IRW EL PYV++FVLLESNSTFTGL K L F +R F+F E RLTYG IG
Sbjct: 120 FSTEVELLTIRWKELYPYVTQFVLLESNSTFTGLPKPLVFAGHRDEFKFIEPRLTYGSIG 179
Query: 182 GRFVKGE-NPFVEESYQRVALDQLIKIAGITDDDLLIMSDVDEIPSGHTINLLRWCDDTP 240
GRF KGE NPF EE+YQR+ALDQL++IAGITDDDLLIMSDVDEIPS HTINLLRWCDD P
Sbjct: 180 GRFKKGEKNPFYEEAYQRIALDQLLRIAGITDDDLLIMSDVDEIPSRHTINLLRWCDDIP 239
Query: 241 EVLHLQLRNYLYSFQFLLDDKSWRASIHRYRAGKTRYAHFRQTDDLLADSGWHCSFCFRH 300
++LHL+L+NYLYSF+F +DDKSWRAS+HRY+ GKTRYAH+RQ+D +LADSGWHCSFCFR
Sbjct: 240 QILHLRLKNYLYSFEFPVDDKSWRASVHRYQTGKTRYAHYRQSDVILADSGWHCSFCFRR 299
Query: 301 INDFVFKMQAYSHVDRIRFKYFLNPKRIQHVICQGADLFDMLPEEYTFQEIIAKLGPIPS 360
I++FVFKM+AYSH DR+RF ++LNPKR+Q VIC G+DLFDM+PEEYTF++II K+GPIP
Sbjct: 300 ISEFVFKMKAYSHYDRVRFAHYLNPKRVQRVICSGSDLFDMIPEEYTFKDIIGKMGPIPH 359
Query: 361 TFSAVHLPAYLLEKMDQYRYLLPGNCMRE 389
++SAVHLPAYLLE ++Y++LLPGNC+R+
Sbjct: 360 SYSAVHLPAYLLENAERYKFLLPGNCLRD 388
>AT2G13290.1 | chr2:5512058-5513143 FORWARD LENGTH=362
Length = 361
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 262/346 (75%), Gaps = 7/346 (2%)
Query: 48 ALLILLIGVPALIFIIYVHGQKVTYFLRPIWEKPPKPFNVLPHYYHENVSMANLCKLHGW 107
L+IL + + I + Q ++Y RP+W+KPP PF +PHYY ENVSM +LC+LHGW
Sbjct: 18 TLIILFL---TCLLCILTNFQTISYLFRPLWDKPPPPFKRIPHYYAENVSMGHLCELHGW 74
Query: 108 KVRETPRRVFDAVLFSNELDILDIRWHELSPYVSEFVLLESNSTFTGLKKDLHFKENRQR 167
R PRRVFDA++FSNELD+L++RW EL PYVS+FV+LESN+TFTG+ K L F N++R
Sbjct: 75 TPRLEPRRVFDAIIFSNELDLLEVRWRELEPYVSKFVILESNTTFTGIPKPLFFDSNKER 134
Query: 168 FEFAESRLTYGMIGGRFVKG----ENPFVEESYQRVALDQLIKIAGITDDDLLIMSDVDE 223
F FAE ++ +G+ G+ E+PF+ E QRVA++ L++ AG++D D +IMSD DE
Sbjct: 135 FAFAEGKIVHGVFPGKKRSTGQPYEDPFLLEGQQRVAMNWLLREAGVSDGDAVIMSDADE 194
Query: 224 IPSGHTINLLRWCDDTPEVLHLQLRNYLYSFQFLLDDKSWRASIHRYRAGKTRYAHFRQT 283
IPS HT+ L+WCD P+V+HL++R Y+YSF+F +D SWRAS+H Y T+Y H RQT
Sbjct: 195 IPSPHTVKFLQWCDGIPDVMHLEMREYMYSFEFPVDYSSWRASVHIYSRKWTQYRHSRQT 254
Query: 284 DDLLADSGWHCSFCFRHINDFVFKMQAYSHVDRIRFKYFLNPKRIQHVICQGADLFDMLP 343
D +L+D+GWHCSFCFR +N+FVFKM+ YSH DR++ K FL+ +RIQ IC+G DLFDMLP
Sbjct: 255 DLILSDAGWHCSFCFRRLNEFVFKMKGYSHADRVKRKEFLDYQRIQKHICKGYDLFDMLP 314
Query: 344 EEYTFQEIIAKLGPIPSTFSAVHLPAYLLEKMDQYRYLLPGNCMRE 389
E+Y+FQE+I+K+GPIP + SAVHLPA+L++ ++R+LLPG C+RE
Sbjct: 315 EKYSFQELISKIGPIPPSASAVHLPAFLIQNAARFRFLLPGGCLRE 360
>AT3G26445.1 | chr3:9680120-9680746 REVERSE LENGTH=119
Length = 118
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 204 LIKIAGITDDDLLIMSDVDEIPSGHTINLLRWCDDTPEVLHLQLRNYLYSFQFLLDDKSW 263
L+ + DLLIMSDVDEIPS HT+NLLRWC++ ++ HL+L+N LYSF+FLLD+KSW
Sbjct: 38 LVIVPTFVLADLLIMSDVDEIPSRHTVNLLRWCNEITQIPHLRLKNSLYSFEFLLDNKSW 97
Query: 264 RASIHRYRAGKTRYAHF 280
RAS+HR++ GKTRYAH+
Sbjct: 98 RASVHRFQMGKTRYAHY 114
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.142 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,843,768
Number of extensions: 387946
Number of successful extensions: 1007
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1004
Number of HSP's successfully gapped: 7
Length of query: 391
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 290
Effective length of database: 8,337,553
Effective search space: 2417890370
Effective search space used: 2417890370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 113 (48.1 bits)