BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0283100 Os12g0283100|AK109925
(989 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0283100 DNA polymerase, beta-like region domain contai... 1939 0.0
Os03g0336700 PAP/25A core domain containing protein 550 e-156
Os07g0679400 Conserved hypothetical protein 460 e-129
Os11g0114700 PAP/25A core domain containing protein 364 e-100
Os12g0114200 PAP/25A core domain containing protein 223 4e-58
Os03g0210800 Hypothetical protein 88 4e-17
>Os12g0283100 DNA polymerase, beta-like region domain containing protein
Length = 989
Score = 1939 bits (5022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 941/989 (95%), Positives = 941/989 (95%)
Query: 1 MAYCEAXXXXXXXXXXXXXXXXXXKTLAEVMATRTPRPASIRPXXXXXXXXXXXXXXXXX 60
MAYCEA KTLAEVMATRTPRPASIRP
Sbjct: 1 MAYCEAGGPVGRSPPSGSGGGGRRKTLAEVMATRTPRPASIRPEATRAAEAAAREVLLRV 60
Query: 61 XPTEEAERRRQDVVGYLRRLLGTALGCEVIAFGSVPLKSYLPDGDVDITVLGNTALDGAC 120
PTEEAERRRQDVVGYLRRLLGTALGCEVIAFGSVPLKSYLPDGDVDITVLGNTALDGAC
Sbjct: 61 APTEEAERRRQDVVGYLRRLLGTALGCEVIAFGSVPLKSYLPDGDVDITVLGNTALDGAC 120
Query: 121 ISDVHSILESEEQDSGAELEIKGLHFIDAEVKLIKCVIENIVVDISFNQIGGVSTLCFLE 180
ISDVHSILESEEQDSGAELEIKGLHFIDAEVKLIKCVIENIVVDISFNQIGGVSTLCFLE
Sbjct: 121 ISDVHSILESEEQDSGAELEIKGLHFIDAEVKLIKCVIENIVVDISFNQIGGVSTLCFLE 180
Query: 181 LADRKVGKNHLFKRSIMLIKAWCYHESRILGAHHGLLSTYALETLVLYIFNIFHKSLHGP 240
LADRKVGKNHLFKRSIMLIKAWCYHESRILGAHHGLLSTYALETLVLYIFNIFHKSLHGP
Sbjct: 181 LADRKVGKNHLFKRSIMLIKAWCYHESRILGAHHGLLSTYALETLVLYIFNIFHKSLHGP 240
Query: 241 LEALYKFLEYFSKFDWDKYCISLNGPVLLSSLPSPAVEPSSIQDELLFGKKTLPEVSDGS 300
LEALYKFLEYFSKFDWDKYCISLNGPVLLSSLPSPAVEPSSIQDELLFGKKTLPEVSDGS
Sbjct: 241 LEALYKFLEYFSKFDWDKYCISLNGPVLLSSLPSPAVEPSSIQDELLFGKKTLPEVSDGS 300
Query: 301 NINFCLKHLNIIDPLKWSNNLGRSVSRGSFYRIRGALSFGAQKLGQILMLHSDLIPTEIF 360
NINFCLKHLNIIDPLKWSNNLGRSVSRGSFYRIRGALSFGAQKLGQILMLHSDLIPTEIF
Sbjct: 301 NINFCLKHLNIIDPLKWSNNLGRSVSRGSFYRIRGALSFGAQKLGQILMLHSDLIPTEIF 360
Query: 361 GFFANTLKRHGRGERSDVGNNDSIESLLDPEYALGKDAPDFTNSDRNQDENRNPNLQTTS 420
GFFANTLKRHGRGERSDVGNNDSIESLLDPEYALGKDAPDFTNSDRNQDENRNPNLQTTS
Sbjct: 361 GFFANTLKRHGRGERSDVGNNDSIESLLDPEYALGKDAPDFTNSDRNQDENRNPNLQTTS 420
Query: 421 YRYFHGDAKDHPWNKIWLTNFDIQYYNMVSGASLMSHSTSSTENGNHNIKQRCSRSLMEQ 480
YRYFHGDAKDHPWNKIWLTNFDIQYYNMVSGASLMSHSTSSTENGNHNIKQRCSRSLMEQ
Sbjct: 421 YRYFHGDAKDHPWNKIWLTNFDIQYYNMVSGASLMSHSTSSTENGNHNIKQRCSRSLMEQ 480
Query: 481 QIYASNQPHILTPSTHKNTLDVINSCRAELNRSDLHEEKVILSPFSPSNXXXXXXXXXXX 540
QIYASNQPHILTPSTHKNTLDVINSCRAELNRSDLHEEKVILSPFSPSN
Sbjct: 481 QIYASNQPHILTPSTHKNTLDVINSCRAELNRSDLHEEKVILSPFSPSNLLDLSGDLDLH 540
Query: 541 XRCLQKIQYHLESMFDGLVQLIQEAFLSGLLDEDSFKIPTRSFSNSTDERPTGLLPVASV 600
RCLQKIQYHLESMFDGLVQLIQEAFLSGLLDEDSFKIPTRSFSNSTDERPTGLLPVASV
Sbjct: 541 LRCLQKIQYHLESMFDGLVQLIQEAFLSGLLDEDSFKIPTRSFSNSTDERPTGLLPVASV 600
Query: 601 DTGTRNLCPVSYFPSTGDVSHKSHTEDQVNAVCQKNVVLSSGTCIISNGFASSPSPPADL 660
DTGTRNLCPVSYFPSTGDVSHKSHTEDQVNAVCQKNVVLSSGTCIISNGFASSPSPPADL
Sbjct: 601 DTGTRNLCPVSYFPSTGDVSHKSHTEDQVNAVCQKNVVLSSGTCIISNGFASSPSPPADL 660
Query: 661 ESYPVSWFHNTQEIMAHGTGMQTLKNVSLLPGTDVLSNVVGQLPFLAADSENYSFSRSHN 720
ESYPVSWFHNTQEIMAHGTGMQTLKNVSLLPGTDVLSNVVGQLPFLAADSENYSFSRSHN
Sbjct: 661 ESYPVSWFHNTQEIMAHGTGMQTLKNVSLLPGTDVLSNVVGQLPFLAADSENYSFSRSHN 720
Query: 721 TREKRVMRGTGTFLPRMSYYTYKERILSEKGRRERERLPDRPWKIKTNPTGYLHQHTSPE 780
TREKRVMRGTGTFLPRMSYYTYKERILSEKGRRERERLPDRPWKIKTNPTGYLHQHTSPE
Sbjct: 721 TREKRVMRGTGTFLPRMSYYTYKERILSEKGRRERERLPDRPWKIKTNPTGYLHQHTSPE 780
Query: 781 VGCSGASTGGITIDQNSSQQDYSRSSVPAEGGVFQKRALINHVSEQIQTSLPWDVHNNQH 840
VGCSGASTGGITIDQNSSQQDYSRSSVPAEGGVFQKRALINHVSEQIQTSLPWDVHNNQH
Sbjct: 781 VGCSGASTGGITIDQNSSQQDYSRSSVPAEGGVFQKRALINHVSEQIQTSLPWDVHNNQH 840
Query: 841 GYVYSDMNMVDNQNPGTTSEGLVGHNSESRELPIHHPPEVQFSETMASSPCILLPHCIGN 900
GYVYSDMNMVDNQNPGTTSEGLVGHNSESRELPIHHPPEVQFSETMASSPCILLPHCIGN
Sbjct: 841 GYVYSDMNMVDNQNPGTTSEGLVGHNSESRELPIHHPPEVQFSETMASSPCILLPHCIGN 900
Query: 901 GQGNLLQESNTCQPFPPATDVFHSIKTKQDENLEVESFRPIPFSSPCAKFGEAFPLPTSK 960
GQGNLLQESNTCQPFPPATDVFHSIKTKQDENLEVESFRPIPFSSPCAKFGEAFPLPTSK
Sbjct: 901 GQGNLLQESNTCQPFPPATDVFHSIKTKQDENLEVESFRPIPFSSPCAKFGEAFPLPTSK 960
Query: 961 GPAETESRPDGLYQLRDEADFPPLQTRSC 989
GPAETESRPDGLYQLRDEADFPPLQTRSC
Sbjct: 961 GPAETESRPDGLYQLRDEADFPPLQTRSC 989
>Os03g0336700 PAP/25A core domain containing protein
Length = 1035
Score = 550 bits (1416), Expect = e-156, Method: Compositional matrix adjust.
Identities = 389/1017 (38%), Positives = 536/1017 (52%), Gaps = 125/1017 (12%)
Query: 62 PTEEAERRRQDVVGYLRRLLGTALGCEVIAFGSVPLKSYLPDGDVDITVLGNTALDGACI 121
PTE +ERRR VVGY RRL+GTALGCEV A+GSVPLK+YLPDGDVD+TVLGNT+ I
Sbjct: 49 PTEASERRRAAVVGYARRLVGTALGCEVFAYGSVPLKTYLPDGDVDLTVLGNTSYGSTLI 108
Query: 122 SDVHSILESEEQDSGAELEIKGLHFIDAEVKLIKCVIENIVVDISFNQIGGVSTLCFLEL 181
D++ IL+SEEQ+ AE E+K L I+AEV+LIKC IENIVVDISFNQ GG+ LCFLEL
Sbjct: 109 DDIYHILQSEEQNCDAEFEVKDLQLINAEVRLIKCTIENIVVDISFNQTGGICALCFLEL 168
Query: 182 ADRKVGKNHLFKRSIMLIKAWCYHESRILGAHHGLLSTYALETLVLYIFNIFHKSLHGPL 241
DRKVGKNHL K SI+LIKAWCY+ESR+LGAHHGL+STYALETL+LYIFN+FHKSLHGPL
Sbjct: 169 VDRKVGKNHLVKNSIILIKAWCYYESRLLGAHHGLISTYALETLILYIFNLFHKSLHGPL 228
Query: 242 EALYKFLEYFSKFDWDKYCISLNGPVLLSSLPSPAVEPSSI-QDELLFGKKTLPEV---- 296
E LY+FLEYFSKFDWD YCISLNGPV LSSLP+ VE ++ +LLF K+ L
Sbjct: 229 EVLYRFLEYFSKFDWDNYCISLNGPVALSSLPNQIVEATNTPGSDLLFDKEFLNNSVQKT 288
Query: 297 -SDGSNINFCLKHLNIIDPLKWSNNLGRSVSRGSFYRIRGALSFGAQKLGQILMLHSDLI 355
S+ N F K+LNIIDPLK NNLGRSV++ SF RIR A S+GAQKLGQ+L+L +LI
Sbjct: 289 DSNACNTEFRSKYLNIIDPLKEHNNLGRSVNKASFNRIRTAFSYGAQKLGQVLLLQPELI 348
Query: 356 PTEIFGFFANTLKRHGRGERSDVGN---NDSI--ESLLDPEYALGKDAPDFTNSDRNQDE 410
P EI+GFF NTL R G G R D+G+ ND+ ES L P AL + S NQDE
Sbjct: 349 PDEIYGFFKNTLNRIGSGVRPDIGDESYNDAFRCESFLGPGKALWDEMSSMKISCNNQDE 408
Query: 411 NRNPN------LQTTSY------RYFHGDAKDHPWNKIWLTNFDIQYYNMVSGASLMSHS 458
NR P+ + SY +FHGD +MV+ ++ +S
Sbjct: 409 NRGPHHLSKCLVNNDSYATLNVPTHFHGD-------------------HMVASSTDLSLK 449
Query: 459 TSS-------------TENGNHNIKQRCSRSLMEQ-------------------QIYASN 486
+S E+GN + +Q ++EQ Q+Y +N
Sbjct: 450 SSCFIQETPNQYPLFYLEDGNGSSEQYLDHEMVEQASCCTAETCHANEEPSMHPQVYPNN 509
Query: 487 QPHILTPSTHKNTLDVINSCRAELNRSDL---HEEKVILSPFSPSNXXXXXXXXXXXXRC 543
H S+ N L+ S ++++ S + HEEK SP SP + RC
Sbjct: 510 TLHTFY-SSLANNLEYSKSGQSDMTNSSINVAHEEKQKFSP-SPLSLVDLSGDLDLQLRC 567
Query: 544 LQKIQYHLESMFDGLVQLIQEAFLSGLLDEDSFKIPTRSFSNSTDERPTGLLPVASVDTG 603
L+++QYHLE MFDG +Q +QEA + DSF+IP + ++++D GLL +S +T
Sbjct: 568 LRQVQYHLEYMFDGFLQSVQEASSDCKVARDSFEIPAVNITSNSDVVLPGLLSPSSTETD 627
Query: 604 TRNLCPVSYFPSTGDVSHKSHTEDQVNAVCQKNVVL-SSGTCIISNGF---ASSPSPPAD 659
R L PVS ST D S +SH E A CQ+N +L S T +NG +S +
Sbjct: 628 ERRLSPVSSSHSTEDSSQQSHDESNWGASCQQNFLLIPSQTIAPTNGLSPCSSYANSDNS 687
Query: 660 LESY----PVSWFHNTQEIMAHGTGMQTLKNVSLLPGTDVLSNVVGQLPFLAADSENYSF 715
++ Y +S H T + + + +N +L+ + + +P
Sbjct: 688 VQLYDSSDDISNMHETDQHILQKHMVSLGQNKTLINRQVRVKSNQASVPKGKFSICKEQI 747
Query: 716 SRSHNTREKRVMRGTGTFLPRMSYYTYKERILS-------EKGRRERERLPDRPWK-IKT 767
++ T++ ++ R Y + ++I S E + E E + R +K ++
Sbjct: 748 TQDTATKDIKLSRHLRVKDSEHEYISTAKKISSYNCDTCLECVKPESEAMIPRHYKHARS 807
Query: 768 NPTGYLHQHTSPEVGC--SGASTGGITIDQNSSQQDYSRSSVPAEGGVFQKRALINHVSE 825
+ + H+ ++G SG+S + Q+ QD S +V QK IN +
Sbjct: 808 SKNSFEHRIYDIDMGFARSGSSRNQMPKYQSLKNQDMSSLNV-------QKEHEINWPRK 860
Query: 826 QIQTSLPWDVHNNQHGYVYSDMNMVDNQNPGTTSEGLVGHNSESRELPIHHPPEVQFSET 885
Q+ + L + N+ G S+ + Q E L + ++P + + ET
Sbjct: 861 QMPSEL-LKLQNSLRGRACSNKKLAAKQINNNHKEHL-SFVRDPEQMPYNQVNSNKEFET 918
Query: 886 MASSPCILLPHCIGNGQGNLLQESNTCQ---PFPPATDVFHSIKTKQDENLEVESFRPIP 942
+ S LLP + + ++TCQ P + F+ ++ EN+E +
Sbjct: 919 VGKSS-QLLPRVQLSLHNDRSLTASTCQSSFPVTKGSTQFNDLEMPSLENIEFGTLGSFS 977
Query: 943 FS-------------SPCAKFGEAFPLPTSKGPAETESRPDGLYQLRDEADFPPLQT 986
+ S +A L P T+SR G Y++ DE FPPL+
Sbjct: 978 LTLVSPKSNKNPNTHSTSKTCADAAALALQSHP--TQSRSPGFYKVGDEDHFPPLRA 1032
>Os07g0679400 Conserved hypothetical protein
Length = 588
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 306/623 (49%), Positives = 363/623 (58%), Gaps = 95/623 (15%)
Query: 408 QDENRNPNLQTTSYRYFHGDAKDHPWNKIWLTNFDIQYYNMVSGASLMSHSTSSTENGNH 467
+DENR+P+LQ TS D +YN VSG S SHS S E GN
Sbjct: 3 EDENRSPDLQRTS---------------------DSCFYNKVSGDSFSSHSPFSQEKGN- 40
Query: 468 NIKQR--CSR--------SLMEQQIYASNQPHILTPSTHKNTLDVINSCRAELNRSDLHE 517
N+K+ C+R S MEQ IYA+NQ ILTPST NTLD+ NSC AE NRSDLHE
Sbjct: 41 NMKRHYDCAREEYLPLGRSSMEQHIYANNQSQILTPSTRINTLDISNSCPAETNRSDLHE 100
Query: 518 EKVILSPFSPSNXXXXXXXXXXXXRCLQKIQYHLESMFDGLVQLIQEAFLSGLLDEDSFK 577
EK+ LS FSPSN CL+K+QYHLESMFD LIQEA SG ++ DSF
Sbjct: 101 EKLPLSHFSPSNLLDLSGDLDLHLECLRKVQYHLESMFD---WLIQEASFSGAVNNDSFN 157
Query: 578 IPTRSFSNSTDERPTGLLPVASVDTGTRNLCPVSYFPSTGDVSHK--SHTEDQVNAVCQK 635
IPT+S ++TD R L V+S T NL V ST ++S K S TE QVNAVCQ+
Sbjct: 158 IPTQSSFSNTDGRALRPLLVSSAYTQRGNLSRVYCSHSTREISQKSVSRTEVQVNAVCQQ 217
Query: 636 NVVLSSGTCIISNGFASSPSPPADLESYPVSWFHNTQEIMA-HGTGMQTLKNVSLLPGTD 694
NV L SGT +N A PSP AD E PVS HNT +I+ HG GM TL NVSLL GTD
Sbjct: 218 NVALPSGT---NNRLALPPSPVADSEKSPVSPLHNTVDIVGTHGAGMHTLNNVSLLSGTD 274
Query: 695 VLSNVVGQLPFLAADSENYSFSRSHNTREKRVMR---------GTGTFLPRMSYYTYKER 745
VLSN QL F A +S +Y + S+ T R GTGT++PRM+Y+TYKER
Sbjct: 275 VLSNAFAQLSFPAVNSVDYKYCWSYTTTNNRATSSQKTNRGKGGTGTYIPRMNYHTYKER 334
Query: 746 ILSEKGRRERERLPDRPWKIKTNPTGYLHQHTSPEVGCSGASTGGITIDQN----SSQQD 801
I GR +RE LPDRP+KIKTNP GY+ + +SPE+GCS +S GGIT + S +QD
Sbjct: 335 IFYYNGRSQREMLPDRPFKIKTNPIGYIRRRSSPEMGCSSSSNGGITFENTSHTPSKKQD 394
Query: 802 Y-SRSSVPAEGGVFQKRALINHVSEQIQTSLPWDVHNNQHGYVYSDMNMVDNQNPGTTSE 860
+ S+S+V AEG Q+RA S W++ N MNMVD+Q PG E
Sbjct: 395 HSSKSTVTAEGSFAQERA---------PASQEWNICTN--------MNMVDSQKPG-NDE 436
Query: 861 GLVGHNSESRELPIHHPPEVQFSE-TMASSPCILLPHCIGNGQGNLLQESNTCQPFPPAT 919
LV N+ESREL HP EVQ E T +SS + LPHC+GNG LQESNT QP PAT
Sbjct: 437 DLVRPNNESRELRTLHPSEVQNREMTASSSSSVELPHCVGNG----LQESNTSQPSSPAT 492
Query: 920 DVFHSIKTKQDENLEVESFRPIPFSS-PCAKFGEAF-PLPTSK---------------GP 962
+ IKT E LE SF PI +S C KF E F PLP K P
Sbjct: 493 EASSPIKTSLVEGLEFGSFEPILGTSFLCEKFCEEFPPLPARKWPAVAAVSTPVTVSSSP 552
Query: 963 AETESRPDGLYQLRDEADFPPLQ 985
AET S+P+GLYQLRDEADFPPL+
Sbjct: 553 AETGSKPEGLYQLRDEADFPPLK 575
>Os11g0114700 PAP/25A core domain containing protein
Length = 801
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/412 (47%), Positives = 261/412 (63%), Gaps = 24/412 (5%)
Query: 62 PTEEAERRRQDVVGYLRRLLGTALGCEVIAFGSVPLKSYLPDGDVDITVLGNTALDGACI 121
P +E RR V+ Y++ LL +GC+V FGSVPLK+YLPDGD+D+T G+++ D
Sbjct: 46 PNPPSEDRRAAVIAYVQHLLRCTVGCQVFPFGSVPLKTYLPDGDIDLTAFGHSS-DEILA 104
Query: 122 SDVHSILESEEQDSGAELEIKGLHFIDAEVKLIKCVIENIVVDISFNQIGGVSTLCFLEL 181
V ++LESEE AE E+K + +I AEVKL+KC+++NI+VDISFNQ GG+ TLCFLE
Sbjct: 105 KQVQAVLESEEARKDAEFEVKDVQYIHAEVKLVKCIVQNIIVDISFNQFGGLCTLCFLEK 164
Query: 182 ADRKVGKNHLFKRSIMLIKAWCYHESRILGAHHGLLSTYALETLVLYIFNIFHKSLHGPL 241
D+K K HLFKRSIMLIKAWCY+ESRILGAHHGL+STYALE LVLYIF++FH +L GPL
Sbjct: 165 VDQKFEKYHLFKRSIMLIKAWCYYESRILGAHHGLISTYALEILVLYIFHLFHGTLDGPL 224
Query: 242 EALYKFLEYFSKFDWDKYCISLNGPVLLSSLPSPAVE-PSSIQDELLFGKK--------- 291
LY+FL+Y+SKFDWD ISL GP+ LSSLP + P ++ D+ +
Sbjct: 225 AVLYRFLDYYSKFDWDNKGISLYGPISLSSLPELVTDSPDTVNDDFTMREDFLKECAQWF 284
Query: 292 -TLPEVSDGSNINFCLKHLNIIDPLKWSNNLGRSVSRGSFYRIRGALSFGAQKLGQILML 350
LP S+ + F K NI+DPLK SNNLGRSVS+G+F RIR A FGA+KLG+I+ +
Sbjct: 285 TVLPRNSEKNTQVFPRKFFNIVDPLKQSNNLGRSVSKGNFLRIRSAFDFGARKLGKIIQV 344
Query: 351 HSDLIPTEIFGFFANTLKRHGRGERSDVGNNDSIESLLDPEYALGKDAPDFTNSDRNQ-- 408
+ E+ FF NTLKRH R DV I + E A +P ++N+
Sbjct: 345 PDNFTMDEVNQFFRNTLKRHCSRVRPDV---QEIALDFNGERADNDSSPLYSNNSFGDLS 401
Query: 409 DENRNPNLQTTSYRYFHGDAKDHPWNKIWLTNFDIQYYNMVSGASLMSHSTS 460
DE N ++ +S HG + + WN + + + VSG L S +T+
Sbjct: 402 DEFNNISISDSSN---HGSLRQNGWNYVA----ENKERKSVSGGLLASKATN 446
>Os12g0114200 PAP/25A core domain containing protein
Length = 178
Score = 223 bits (569), Expect = 4e-58, Method: Composition-based stats.
Identities = 102/160 (63%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
Query: 88 EVIAFGSVPLKSYLPDGDVDITVLGNTALDGACISDVHSILESEEQDSGAELEIKGLHFI 147
+V FGSVPLK+YLPDGD+D+T G+++ D V ++LESEE AE E+K + +I
Sbjct: 1 QVFPFGSVPLKTYLPDGDIDLTAFGHSS-DEILAKQVQAVLESEEARKDAEFEVKDVQYI 59
Query: 148 DAEVKLIKCVIENIVVDISFNQIGGVSTLCFLELADRKVGKNHLFKRSIMLIKAWCYHES 207
AEVKL+KC+++NI+VDISFNQ GG+ TLCFLE D+K KNHLFKRSIMLIKAWCY+ES
Sbjct: 60 HAEVKLVKCIVQNIIVDISFNQFGGLCTLCFLEKVDQKFEKNHLFKRSIMLIKAWCYYES 119
Query: 208 RILGAHHGLLSTYALETLVLYIFNIFHKSLHGPLEALYKF 247
RILGAHHGL+STYALE LVLYIF++FH +L GPL F
Sbjct: 120 RILGAHHGLISTYALEILVLYIFHLFHGTLDGPLAVSSDF 159
>Os03g0210800 Hypothetical protein
Length = 871
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%)
Query: 304 FCLKHLNIIDPLKWSNNLGRSVSRGSFYRIRGALSFGAQKLGQILMLHSDLIPTEIFGFF 363
F KH N+IDPL+ +NNLGRSVS+G+F+RIR A SFGA++L ++L + + E+ FF
Sbjct: 42 FVSKHFNVIDPLRTNNNLGRSVSKGNFFRIRSAFSFGAKRLAKLLECPKEDLIAEVNQFF 101
Query: 364 ANTLKRHGRGERSDV 378
NT RHG G R D
Sbjct: 102 TNTWIRHGSGNRPDA 116
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 34,241,394
Number of extensions: 1531843
Number of successful extensions: 3815
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 3791
Number of HSP's successfully gapped: 6
Length of query: 989
Length of database: 17,035,801
Length adjustment: 111
Effective length of query: 878
Effective length of database: 11,240,047
Effective search space: 9868761266
Effective search space used: 9868761266
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 161 (66.6 bits)