Os11g0114700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PAP/25A core domain containing protein.
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Os11g0114700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : PAP/25A core domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.75 | 0.243 | 10.7 | 2.2 | 0.363 | -0.747 | -0.258 | 1.97 | 0.699 | 3.39 | 20.72 | 1577 | -- | -- |
| 29.58 | 0.253 | 10.7 | 1.81 | 0.393 | -0.863 | -0.256 | -- | 0.606 | 3.31 | 13.85 | 7374 | -- | -- |
| 26.74 | 0.241 | 10.7 | 2.15 | 0.36 | -0.751 | -- | 1.94 | 0.679 | 3.21 | 21.49 | 1609 | -- | -- |
| 29.69 | 0.254 | 10.7 | 1.81 | 0.39 | -0.886 | -- | -- | 0.623 | 3.44 | 11.9 | 7329 | -- | -- |
| 31.73 | 0.264 | 10.7 | 1.8 | -- | -0.909 | -- | 1.6 | 0.6 | -- | 21.49 | 1609 | -- | -- |
| 42.56 | 0.306 | 10.8 | 1.37 | 0.363 | -- | -0.281 | -- | 0.384 | 3.6 | -- | -- | -- | -- |
| 42.8 | 0.306 | 10.8 | 1.37 | 0.361 | -- | -- | -- | 0.385 | 3.57 | -- | -- | -- | -- |
| 34.02 | 0.273 | 10.8 | 1.54 | -- | -0.81 | -- | -- | 0.522 | -- | 21.49 | 1609 | -- | -- |
| 89.56 | 0.441 | 10.8 | -- | 0.279 | -0.382 | -- | -- | 0.236 | 2.57 | 27.2 | 453 | -- | -- |
| 50.08 | 0.331 | 10.8 | 1.39 | -- | -- | -- | -- | 0.395 | -- | -- | -- | -- | -- |
| 92.46 | 0.45 | 10.8 | -- | 0.388 | -- | -- | -- | 0.233 | 3.55 | -- | -- | -- | -- |
| 92.25 | 0.447 | 10.8 | -- | -- | -0.573 | -- | -- | 0.257 | -- | 25.3 | 152 | -- | -- |
| 100.89 | 0.469 | 10.8 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.75 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 25.08 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 3 | 25.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 4 | 25.49 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 5 | 25.51 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 7 | 25.62 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 8 |
| 11 | 25.72 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 18 | 25.86 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 5 |
| 19 | 25.88 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 22 | 25.90 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 86 | 26.33 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 89 | 26.34 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 108 | 26.41 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 118 | 26.44 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 19 | NA |
| 119 | 26.44 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 131 | 26.47 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 161 | 26.50 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 174 | 26.54 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 175 | 26.54 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 176 | 26.54 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 181 | 26.55 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 307 | 26.83 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 343 | 26.91 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 384 | 26.96 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 18 |
| 478 | 27.05 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 507 | 27.08 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 511 | 27.08 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 531 | 27.10 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 533 | 27.10 | wind | 3.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 542 | 27.11 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 584 | 27.15 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 591 | 27.15 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 3 | 18 |
| 609 | 27.18 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 613 | 27.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 614 | 27.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 632 | 27.22 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 633 | 27.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 685 | 27.27 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 734 | 27.33 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 12 |
| 767 | 27.36 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 779 | 27.37 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 795 | 27.38 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 796 | 27.38 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 812 | 27.40 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 814 | 27.40 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 831 | 27.42 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 833 | 27.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 3 |
| 845 | 27.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 6 |
| 913 | 27.49 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 927 | 27.50 | temperature | 20.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 961 | 27.52 | wind | 5.0 | 43200 | < th | dose independent | sin | 0 | NA |
| 982 | 27.53 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 2 |