Os03g0210800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0210800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.61 | 0.324 | 9.17 | 1.35 | 0.00212 | 1.12 | 0.781 | -2.73 | 0.391 | 7.13 | 31.1 | 333 | -- | -- |
| 53.4 | 0.34 | 9.2 | 0.913 | 0.033 | 1.16 | 0.646 | -- | 0.336 | 10 | 29.15 | 346 | -- | -- |
| 49.05 | 0.326 | 9.17 | 1.34 | 0.00137 | 1.18 | -- | -2.74 | 0.384 | 18.4 | 32.7 | 320 | -- | -- |
| 53.5 | 0.341 | 9.22 | 0.893 | 0.0619 | 1.1 | -- | -- | 0.289 | 12.1 | 29.48 | 276 | -- | -- |
| 48.98 | 0.326 | 9.17 | 1.32 | -- | 1.17 | -- | -2.65 | 0.368 | -- | 32.21 | 300 | -- | -- |
| 70.13 | 0.393 | 9.27 | 0.629 | 0.307 | -- | 0.105 | -- | 0.0644 | 5.41 | -- | -- | -- | -- |
| 70.15 | 0.392 | 9.27 | 0.629 | 0.308 | -- | -- | -- | 0.0638 | 5.28 | -- | -- | -- | -- |
| 53.72 | 0.341 | 9.22 | 0.901 | -- | 1.09 | -- | -- | 0.288 | -- | 29.5 | 286 | -- | -- |
| 73.44 | 0.399 | 9.27 | -- | 0.102 | 0.775 | -- | -- | 0.0856 | 5.96 | 66.69 | 284 | -- | -- |
| 75.1 | 0.405 | 9.27 | 0.639 | -- | -- | -- | -- | 0.0715 | -- | -- | -- | -- | -- |
| 80.57 | 0.42 | 9.28 | -- | 0.319 | -- | -- | -- | -0.00618 | 5.21 | -- | -- | -- | -- |
| 73.41 | 0.399 | 9.26 | -- | -- | 0.806 | -- | -- | 0.131 | -- | 30.07 | 291 | -- | -- |
| 85.88 | 0.433 | 9.29 | -- | -- | -- | -- | -- | 0.000597 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.18 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 2 | 45.11 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 7 | 45.33 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 9 | 45.35 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 19 | 45.35 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 39 | 45.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 44 | 45.82 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 47 | 45.84 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 55 | 45.88 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 56 | 45.90 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 58 | 45.90 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 59 | 45.90 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 93 | 46.03 | humidity | 90 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 94 | 46.03 | radiation | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 102 | 46.13 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 110 | 46.18 | radiation | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 120 | 46.18 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 132 | 46.24 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 140 | 46.28 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 152 | 46.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 156 | 46.34 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 162 | 46.35 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 170 | 46.36 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 17 |
| 173 | 46.37 | radiation | 1 | 14400 | > th | dose independent | sin | 12 | NA |
| 180 | 46.38 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 220 | 46.51 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 224 | 46.53 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 227 | 46.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 16 |
| 236 | 46.56 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 237 | 46.56 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 241 | 46.58 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 254 | 46.61 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 282 | 46.64 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 311 | 46.70 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 331 | 46.71 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 334 | 46.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 17 |
| 397 | 46.75 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 14 |
| 406 | 46.76 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 432 | 46.80 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 453 | 46.81 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 464 | 46.83 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 13 |
| 488 | 46.88 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 491 | 46.89 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 495 | 46.89 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 501 | 46.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 505 | 46.91 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 531 | 46.95 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 538 | 46.96 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 539 | 46.96 | humidity | 90 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 544 | 46.96 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 565 | 46.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 590 | 47.01 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 602 | 47.02 | radiation | 1 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 608 | 47.03 | humidity | 90 | 14400 | > th | dose independent | sin | 12 | NA |
| 638 | 47.05 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 11 |
| 656 | 47.06 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 15 |
| 684 | 47.08 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 15 |
| 711 | 47.10 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 714 | 47.10 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 21 |
| 726 | 47.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 784 | 47.14 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 799 | 47.15 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 835 | 47.18 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |
| 841 | 47.18 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 20 |
| 873 | 47.19 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 911 | 47.19 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 920 | 47.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 935 | 47.21 | radiation | 1 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 937 | 47.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 963 | 47.22 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 966 | 47.22 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 967 | 47.22 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 987 | 47.23 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 10 |