BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0659500 Os11g0659500|AK068543
(425 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0659500 Similar to Acyl-ACP thioesterase (Fragment) 809 0.0
Os06g0143400 Similar to Acyl-ACP thioesterase (Fragment) 689 0.0
Os02g0644700 Similar to Acyl-ACP thioesterase (Fragment) 537 e-153
Os06g0596300 Similar to Acyl-ACP thioesterase (Fragment) 406 e-113
Os01g0502300 270 1e-72
Os09g0505300 Similar to Br FatA1 223 3e-58
>Os11g0659500 Similar to Acyl-ACP thioesterase (Fragment)
Length = 425
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/425 (92%), Positives = 393/425 (92%)
Query: 1 MAGSLXXXXXXXXXXXXXXXXXXXXKNAAVTGELPENLSVRGIVAKPNPPPAAMQVKAQA 60
MAGSL KNAAVTGELPENLSVRGIVAKPNPPPAAMQVKAQA
Sbjct: 1 MAGSLAASAFFPGPGSSPAASARSSKNAAVTGELPENLSVRGIVAKPNPPPAAMQVKAQA 60
Query: 61 QTLPKVNGTKVNLKTVKPDMEETVPYSAPKTFYNQLPDWSMXXXXXXXXXXXXEKQWTLL 120
QTLPKVNGTKVNLKTVKPDMEETVPYSAPKTFYNQLPDWSM EKQWTLL
Sbjct: 61 QTLPKVNGTKVNLKTVKPDMEETVPYSAPKTFYNQLPDWSMLLAAITTIFLAAEKQWTLL 120
Query: 121 DWKPKKPDMLVDTFGFGRIIQDGMVFRQNFMIRSYEIGADRTASIETLMNHLQETALNHV 180
DWKPKKPDMLVDTFGFGRIIQDGMVFRQNFMIRSYEIGADRTASIETLMNHLQETALNHV
Sbjct: 121 DWKPKKPDMLVDTFGFGRIIQDGMVFRQNFMIRSYEIGADRTASIETLMNHLQETALNHV 180
Query: 181 RTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVEQYPAWGDTVQVDTWVAAAGKNGMRRDW 240
RTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVEQYPAWGDTVQVDTWVAAAGKNGMRRDW
Sbjct: 181 RTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVEQYPAWGDTVQVDTWVAAAGKNGMRRDW 240
Query: 241 HVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVRAEIGPYFNDRSAITEEQSEKLAKT 300
HVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVRAEIGPYFNDRSAITEEQSEKLAKT
Sbjct: 241 HVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVRAEIGPYFNDRSAITEEQSEKLAKT 300
Query: 301 GNKVGDDATEQFIRKGLTPRWGDLDVNQHVNNVKYIGWILESAPISVLEKHELASMTLDY 360
GNKVGDDATEQFIRKGLTPRWGDLDVNQHVNNVKYIGWILESAPISVLEKHELASMTLDY
Sbjct: 301 GNKVGDDATEQFIRKGLTPRWGDLDVNQHVNNVKYIGWILESAPISVLEKHELASMTLDY 360
Query: 361 RKECGRDSVLQSLTTVSGECTSIGADKQASAIQCDHLLQLESGADIVKAHTEWRPKRSHA 420
RKECGRDSVLQSLTTVSGECTSIGADKQASAIQCDHLLQLESGADIVKAHTEWRPKRSHA
Sbjct: 361 RKECGRDSVLQSLTTVSGECTSIGADKQASAIQCDHLLQLESGADIVKAHTEWRPKRSHA 420
Query: 421 AAENA 425
AAENA
Sbjct: 421 AAENA 425
>Os06g0143400 Similar to Acyl-ACP thioesterase (Fragment)
Length = 427
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/420 (79%), Positives = 352/420 (83%), Gaps = 5/420 (1%)
Query: 1 MAGSLXXXXXXXXXXXXXXXXXXXXKNAAVTGELPENLSVRGIVAKPNPPPAAMQVKAQA 60
MAGSL KN TGELPENLSVRGIVAKPNP P AMQVKAQA
Sbjct: 1 MAGSLAASAFFPVPGSSPAASARSSKN--TTGELPENLSVRGIVAKPNPSPGAMQVKAQA 58
Query: 61 QTLPKVNGTKVNLKTVKPDMEETVPYSAPKTFYNQLPDWSMXXXXXXXXXXXXEKQWTLL 120
Q LPKVNGTKVNLKT PD E+ +PY+APKTFYNQLPDWSM EKQWTLL
Sbjct: 59 QALPKVNGTKVNLKTTSPDKEDIIPYTAPKTFYNQLPDWSMLLAAVTTIFLAAEKQWTLL 118
Query: 121 DWKPKKPDMLVDTFGFGRIIQDGMVFRQNFMIRSYEIGADRTASIETLMNHLQETALNHV 180
DWKPKKPDML DTFGFGRIIQDG+VFRQNF+IRSYEIGADRTASIETLMNHLQETALNHV
Sbjct: 119 DWKPKKPDMLADTFGFGRIIQDGLVFRQNFLIRSYEIGADRTASIETLMNHLQETALNHV 178
Query: 181 RTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVEQYPAWGDTVQVDTWVAAAGKNGMRRDW 240
+TAGLLGDGFGATPEMSKRNLIWVVSKIQLLVE+YP+WGD VQVDTWVAAAGKNGMRRDW
Sbjct: 179 KTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVERYPSWGDMVQVDTWVAAAGKNGMRRDW 238
Query: 241 HVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVRAEIGPYFNDRSAITEEQSEKLAKT 300
HVRDYNSG+TILRATSVWVMM+K TRRLSKMPDEVRAEIGPYFN RSAI+EEQ EKL K
Sbjct: 239 HVRDYNSGQTILRATSVWVMMNKNTRRLSKMPDEVRAEIGPYFNGRSAISEEQGEKLPKP 298
Query: 301 GNKVGDDATEQFIRKGLTPRWGDLDVNQHVNNVKYIGWILESAPISVLEKHELASMTLDY 360
G AT+QF RKGLTP+W DLDVNQHVNNVKYIGWILESAPIS+LEKHELASMTLDY
Sbjct: 299 GTTFDGAATKQFTRKGLTPKWSDLDVNQHVNNVKYIGWILESAPISILEKHELASMTLDY 358
Query: 361 RKECGRDSVLQSLTTVSGECTSIGADKQASAIQCDHLLQLESGADIVKAHTEWRPKRSHA 420
RKECGRDSVLQSLT VSGEC + S+IQCDHLLQLESGADIVKAHTEWRPKR+
Sbjct: 359 RKECGRDSVLQSLTAVSGECDDGNTE---SSIQCDHLLQLESGADIVKAHTEWRPKRAQG 415
>Os02g0644700 Similar to Acyl-ACP thioesterase (Fragment)
Length = 298
Score = 537 bits (1383), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/298 (88%), Positives = 264/298 (88%)
Query: 1 MAGSLXXXXXXXXXXXXXXXXXXXXKNAAVTGELPENLSVRGIVAKPNPPPAAMQVKAQA 60
MAGSL KNAAVTGELPENLSV GIVAKPNPPPAAMQVKAQA
Sbjct: 1 MAGSLAASAFFPGPGSSPAASARSSKNAAVTGELPENLSVCGIVAKPNPPPAAMQVKAQA 60
Query: 61 QTLPKVNGTKVNLKTVKPDMEETVPYSAPKTFYNQLPDWSMXXXXXXXXXXXXEKQWTLL 120
QTLPKVNGTKVNLKTVKPDMEETVP+SAPKTFYNQLPDWSM EKQWTLL
Sbjct: 61 QTLPKVNGTKVNLKTVKPDMEETVPHSAPKTFYNQLPDWSMLLAAITTIFLAAEKQWTLL 120
Query: 121 DWKPKKPDMLVDTFGFGRIIQDGMVFRQNFMIRSYEIGADRTASIETLMNHLQETALNHV 180
DWKPKKPDMLVDTFGFGRIIQDGMVFRQNFMIRSYEIGADRTASIETLMNHLQETALNHV
Sbjct: 121 DWKPKKPDMLVDTFGFGRIIQDGMVFRQNFMIRSYEIGADRTASIETLMNHLQETALNHV 180
Query: 181 RTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVEQYPAWGDTVQVDTWVAAAGKNGMRRDW 240
RTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVEQYPAWGD VQVDTWVAAAGKNGMRRDW
Sbjct: 181 RTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVEQYPAWGDMVQVDTWVAAAGKNGMRRDW 240
Query: 241 HVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVRAEIGPYFNDRSAITEEQSEKLA 298
HVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVRAEIGPYFNDRSAITEEQSEKLA
Sbjct: 241 HVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVRAEIGPYFNDRSAITEEQSEKLA 298
>Os06g0596300 Similar to Acyl-ACP thioesterase (Fragment)
Length = 357
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/319 (63%), Positives = 244/319 (76%), Gaps = 8/319 (2%)
Query: 29 AVTGELPENLSVRGIVAKPNPPPAAM-----QVKAQAQTLPKVNGTKVNLKTVKPD-MEE 82
+V GE P++L VRGI AKP +A + + A +PKVNG L + D M
Sbjct: 22 SVLGERPDSLDVRGIAAKPGSSSSAAALRAGKTRTHA-AIPKVNGGSSALADPEHDTMSS 80
Query: 83 TVPYSAPKTFYNQLPDWSMXXXXXXXXXXXXEKQWTLLDWKPKKPDMLVDTFGFGRIIQD 142
+ +AP+TFYNQLPDWSM EKQWTLLDWKPK+PDML DTFGFGR+I +
Sbjct: 81 SSSSAAPRTFYNQLPDWSMLLAAITTIFLAAEKQWTLLDWKPKRPDMLTDTFGFGRMIHE 140
Query: 143 GMVFRQNFMIRSYEIGADRTASIETLMNHLQETALNHVRTAGLLGDGFGATPEMSKRNLI 202
G++FRQNF IRSYEIGADRTASIETLMNHLQETALNHV++AGLLGDGFG+TPEMSKR+L
Sbjct: 141 GLMFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKSAGLLGDGFGSTPEMSKRDLF 200
Query: 203 WVVSKIQLLVEQYPAWGDTVQVDTWVAAAGKNGMRRDWHVRDYNSGRTILRATSVWVMMH 262
WVVS++Q +VE+YP WGDTV+VDTWV A GKNGMRRDWH+RD +G TIL+ATS WVMMH
Sbjct: 201 WVVSQMQAIVERYPCWGDTVEVDTWVGAHGKNGMRRDWHIRDSVTGHTILKATSKWVMMH 260
Query: 263 KKTRRLSKMPDEVRAEIGPYFNDRSAITEEQSEKLAKTGNKVGDDATEQFIRKGLTPRWG 322
K TRRL+++PDEVR EI PYF + ++I +E ++KL K + G + +++R GLTPRW
Sbjct: 261 KLTRRLARIPDEVRTEIEPYFFEHASIVDEDNQKLPKLPDIEGANVA-KYVRTGLTPRWA 319
Query: 323 DLDVNQHVNNVKYIGWILE 341
DLD+NQHVNNVKYIGWILE
Sbjct: 320 DLDINQHVNNVKYIGWILE 338
>Os01g0502300
Length = 437
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 201/345 (58%), Gaps = 65/345 (18%)
Query: 131 VDTFGFGRIIQDGMVFRQNFMIRSYEIGADRTASIETLMNHLQETALNHVRTAGLLGDGF 190
VD F I++ G+ +RQ ++RSYE+G DRTA++ET++N LQETALNHV +GLLGDGF
Sbjct: 89 VDPFRQAVIVEGGVRYRQTVVVRSYEVGPDRTATLETVLNLLQETALNHVWMSGLLGDGF 148
Query: 191 GATPEMSKRNLIWVVSKIQLLVEQYPAW-------------------------------- 218
GAT M NLIWVVS++ + V+ YP W
Sbjct: 149 GATHAMITNNLIWVVSRMHVQVDHYPIWYIILVFVFVHGVLFVQRGRGKKIYAHQTEVGC 208
Query: 219 -GDTVQVDTWVAAAGKNGMRRDWHVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVRA 277
G+ +++DTWV ++GKNGMRRDW VR +SG +RATS WVMM+K TRRLSKMP EVR
Sbjct: 209 RGEVLEIDTWVGSSGKNGMRRDWLVRGRSSGAIFVRATSTWVMMNKVTRRLSKMPKEVRD 268
Query: 278 EIGPYFNDRSAITEEQSEKLAKTGNKVGDDATEQFIRKGLTPRWGDLDVNQHVNNVKYIG 337
EI P+F DR AI E ++K+ K D ++ L P+ DLD+N HVNNVKY+
Sbjct: 269 EISPWFIDRHAIDEVATDKIIKL------DTNATYVDSDLKPKRSDLDMNHHVNNVKYVR 322
Query: 338 WILESAPISVLEKHELASMTLDYRKECGRDSVLQSL------TTVSGECTSI-------- 383
W+LE+ P L++H+L+S+ L+YRKECG V+QS+ T + GE SI
Sbjct: 323 WMLETLPDQFLQQHQLSSIILEYRKECGSSDVVQSICQPDEDTIMPGENVSIVMGPSLSQ 382
Query: 384 ----GADKQASAIQ-----CDHLLQLESG---ADIVKAHTEWRPK 416
G A A+Q HLLQL++ +IV+ T W+ K
Sbjct: 383 EIINGHHSLAGALQQWPTKYTHLLQLKANDKYEEIVRGRTTWKKK 427
>Os09g0505300 Similar to Br FatA1
Length = 276
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 166/275 (60%), Gaps = 12/275 (4%)
Query: 149 NFMIRSYEIGADRTASIETLMNHLQETALNHVRTAGLLGDGFGATPEMSKRNLIWVVSKI 208
+F++R YE+G ++TA++ET+ N LQE NH ++ G DGF T M K LIWV +++
Sbjct: 1 SFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLGLIWVTNRM 60
Query: 209 QLLVEQYPAWGDTVQVDTWVAAAGKNGMRRDWHVRDYNSGRTILRATSVWVMMHKKTRRL 268
+ + +YPAWGD V+++TW GK G RRDW ++D +G I RATS WVMM++ TRRL
Sbjct: 61 HIEIYKYPAWGDVVEIETWCQEDGKIGTRRDWILKDLANGEVIGRATSKWVMMNQNTRRL 120
Query: 269 SKMPDEVRAEIGPYF--NDRSAITEEQSEKLAKTGNKVGDDATEQFIRKGLTPRWGDLDV 326
++ D+VR E+ + R A EE + L K + D A Q R GL PR DLD+
Sbjct: 121 QRVSDDVRDEVFVHCPKTPRLAFPEENNGSLKKIP-VLTDPA--QHSRLGLVPRRADLDM 177
Query: 327 NQHVNNVKYIGWILESAPISVLEKHELASMTLDYRKECGRDSVLQSLTTV------SGEC 380
NQHVNNV YIGW+LES P +++ HEL ++TLDYR+EC D ++ SLT + S
Sbjct: 178 NQHVNNVTYIGWVLESIPQDIIDTHELQTITLDYRRECQHDDIVDSLTYIEEGEEKSSNG 237
Query: 381 TSIGADKQASAIQCDHLLQLE-SGADIVKAHTEWR 414
++ A Q H L+ +G +I + T WR
Sbjct: 238 SAFAAPHPEEQRQFLHCLRFAGNGNEINRGRTVWR 272
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,656,421
Number of extensions: 535489
Number of successful extensions: 1449
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1444
Number of HSP's successfully gapped: 7
Length of query: 425
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 321
Effective length of database: 11,605,545
Effective search space: 3725379945
Effective search space used: 3725379945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)