Os02g0644700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl-ACP thioesterase (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os02g0644700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Acyl-ACP thioesterase (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.38 | 0.333 | 8.61 | 0.242 | 0.363 | -0.794 | 0.132 | 1.79 | 0.399 | 6.51 | 16.12 | 12 | -- | -- |
| 53.33 | 0.343 | 8.64 | -0.0248 | 0.361 | -0.772 | -0.0112 | -- | 0.322 | 6.42 | 15.22 | 12 | -- | -- |
| 50.42 | 0.331 | 8.61 | 0.241 | 0.364 | -0.789 | -- | 1.77 | 0.397 | 6.44 | 16.14 | 12 | -- | -- |
| 53.26 | 0.34 | 8.64 | -0.0185 | 0.352 | -0.813 | -- | -- | 0.325 | 6.41 | 14.14 | 19 | -- | -- |
| 53.19 | 0.34 | 8.61 | 0.339 | -- | -1.04 | -- | 1.67 | 0.447 | -- | 16.87 | 253 | -- | -- |
| 59.21 | 0.361 | 8.67 | -0.181 | 0.509 | -- | -0.359 | -- | 0.208 | 4.68 | -- | -- | -- | -- |
| 59.51 | 0.361 | 8.67 | -0.178 | 0.509 | -- | -- | -- | 0.209 | 4.88 | -- | -- | -- | -- |
| 55.2 | 0.346 | 8.64 | 0.0643 | -- | -1.1 | -- | -- | 0.371 | -- | 10.66 | 278 | -- | -- |
| 52.3 | 0.337 | 8.65 | -- | 0.294 | -0.817 | -- | -- | 0.325 | 4.13 | 12.84 | 407 | -- | -- |
| 73.19 | 0.4 | 8.67 | -0.16 | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
| 60.35 | 0.363 | 8.66 | -- | 0.506 | -- | -- | -- | 0.229 | 4.89 | -- | -- | -- | -- |
| 55.3 | 0.346 | 8.64 | -- | -- | -1.06 | -- | -- | 0.361 | -- | 14.7 | 278 | -- | -- |
| 73.86 | 0.401 | 8.67 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 3 | 47.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 7 | 47.66 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 18 | 47.88 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 43 | 48.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 200 | 49.10 | temperature | 15 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 202 | 49.13 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 205 | 49.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 15 |
| 249 | 49.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 337 | 49.61 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 420 | 49.86 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 430 | 49.89 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 12 |
| 462 | 49.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 22 |
| 464 | 49.98 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 14 |
| 493 | 50.06 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 504 | 50.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 505 | 50.08 | temperature | 20 | 720 | > th | dose independent | sin | 4 | NA |
| 568 | 50.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 572 | 50.19 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 15 |
| 627 | 50.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 740 | 50.44 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 755 | 50.45 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 767 | 50.46 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 973 | 50.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |