Os11g0659500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl-ACP thioesterase (Fragment).
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Os11g0659500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acyl-ACP thioesterase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.43 | 0.272 | 10.3 | -0.471 | 0.378 | -0.541 | -0.165 | -0.918 | -0.134 | 4.21 | 20.18 | 956 | -- | -- |
| 35.31 | 0.277 | 10.3 | -0.323 | 0.369 | -0.407 | -0.302 | -- | -0.0888 | 3.99 | 20.9 | 935 | -- | -- |
| 33.47 | 0.269 | 10.3 | -0.477 | 0.381 | -0.554 | -- | -0.977 | -0.134 | 4.28 | 20.17 | 1020 | -- | -- |
| 35.49 | 0.277 | 10.3 | -0.306 | 0.386 | -0.419 | -- | -- | -0.0842 | 4.6 | 20.87 | 1209 | -- | -- |
| 40.54 | 0.297 | 10.3 | -0.449 | -- | -0.509 | -- | -0.786 | -0.124 | -- | 20 | 519 | -- | -- |
| 39.92 | 0.296 | 10.3 | -0.48 | 0.367 | -- | -0.155 | -- | -0.189 | 4.82 | -- | -- | -- | -- |
| 39.97 | 0.296 | 10.3 | -0.479 | 0.366 | -- | -- | -- | -0.188 | 4.9 | -- | -- | -- | -- |
| 42.23 | 0.303 | 10.3 | -0.333 | -- | -0.374 | -- | -- | -0.0919 | -- | 20.8 | 521 | -- | -- |
| 36.81 | 0.283 | 10.3 | -- | 0.379 | -0.543 | -- | -- | -0.0237 | 4.49 | 20.8 | 2448 | -- | -- |
| 47.05 | 0.32 | 10.3 | -0.466 | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
| 46.03 | 0.317 | 10.3 | -- | 0.358 | -- | -- | -- | -0.135 | 4.94 | -- | -- | -- | -- |
| 43.8 | 0.308 | 10.3 | -- | -- | -0.528 | -- | -- | -0.00918 | -- | 20.89 | 2040 | -- | -- |
| 52.77 | 0.339 | 10.3 | -- | -- | -- | -- | -- | -0.127 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.34 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 33.44 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 19 |
| 3 | 33.48 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 4 | 33.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 5 | 33.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 10 | 33.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 11 | 33.51 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 18 | 33.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 23 | 33.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 24 | 33.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 30 | 33.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 35 | 33.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 47 | 33.62 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 48 | 33.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 111 | 33.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 117 | 33.74 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 144 | 33.76 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 17 |
| 165 | 33.78 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 178 | 33.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 204 | 33.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 241 | 33.85 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 21 |
| 260 | 33.86 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 23 |
| 375 | 33.96 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 459 | 34.00 | temperature | 20 | 720 | < th | dose independent | sin | 23 | NA |
| 496 | 34.02 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 566 | 34.06 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 13 |
| 579 | 34.07 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 612 | 34.08 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 23 |
| 632 | 34.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 11 |
| 678 | 34.12 | temperature | 30 | 90 | < th | dose dependent | rect. | 24 | 22 |
| 713 | 34.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 813 | 34.23 | temperature | 20 | 720 | > th | dose independent | sin | 2 | NA |
| 823 | 34.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 836 | 34.24 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 21 |
| 855 | 34.26 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 876 | 34.28 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 908 | 34.30 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 10 |
| 917 | 34.31 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 8 |
| 983 | 34.36 | wind | 7 | 43200 | < th | dose dependent | rect. | 1 | 1 |