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Os09g0505300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Br FatA1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0203) R2 : 0.469
β1 : -0.998 (0.0744) R2dD : 0.217 R2D : 0.00696
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.747 (0.0434) R2dN8 : 0.462 R2N8 : 0.252
σ : 0.381
deviance : 66.63
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.31 0.33 10.5 -0.84 0.372 0.411 0.25 1.47 -0.802 20.4 0.3651 16740 -- --
51.21 0.333 10.5 -0.92 0.372 0.439 0.264 -- -0.802 20.4 2 17381 -- --
49.45 0.328 10.5 -0.842 0.37 0.403 -- 1.45 -0.799 20.5 0.5699 16661 -- --
51.01 0.333 10.5 -0.941 0.382 0.531 -- -- -0.87 20.4 2.89 17377 -- --
57.1 0.352 10.5 -0.843 -- 0.399 -- 1.37 -0.791 -- 1.068 16983 -- --
58.15 0.357 10.5 -0.987 0.382 -- 0.312 -- -0.743 20.6 -- -- -- --
58.46 0.358 10.5 -0.997 0.381 -- -- -- -0.743 20.6 -- -- -- --
58.9 0.357 10.5 -0.954 -- 0.544 -- -- -0.865 -- 3.683 17000 -- --
70.5 0.391 10.5 -- 0.373 0.934 -- -- -0.735 20.6 4.467 2460 -- --
66.63 0.381 10.5 -0.998 -- -- -- -- -0.747 -- -- -- -- --
84.67 0.43 10.5 -- 0.385 -- -- -- -0.632 20.4 -- -- -- --
78.59 0.413 10.5 -- -- 0.899 -- -- -0.728 -- 5.729 2480 -- --
92.91 0.45 10.5 -- -- -- -- -- -0.636 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.49 precipitation 0.1 14400 > th dose dependent sin 2 NA
2 49.51 humidity 80.0 43200 > th dose independent rect. 6 1
3 49.56 precipitation 0.1 14400 > th dose independent sin 0 NA
4 49.56 precipitation 0.1 14400 < th dose independent sin 0 NA
5 49.56 precipitation 0.1 14400 < th dose dependent sin 0 NA
6 49.57 precipitation 0.1 14400 > th dose independent rect. 11 9
7 49.57 precipitation 0.1 14400 < th dose independent rect. 9 11
8 49.57 precipitation 0.1 14400 < th dose dependent rect. 9 11
9 49.57 precipitation 0.1 14400 > th dose dependent rect. 22 22
10 49.58 precipitation 0.1 14400 > th dose independent rect. 9 11
11 49.59 precipitation 0.1 14400 > th dose independent rect. 7 13
13 49.60 precipitation 0.1 14400 < th dose independent rect. 11 9
15 49.60 precipitation 0.1 14400 < th dose independent rect. 7 13
17 49.60 precipitation 0.1 14400 < th dose dependent rect. 11 9
19 49.60 precipitation 0.1 14400 < th dose dependent rect. 7 13
25 49.61 precipitation 0.1 14400 > th dose independent rect. 3 17
31 49.62 precipitation 0.1 14400 > th dose independent rect. 3 15
32 49.62 precipitation 0.1 14400 < th dose independent rect. 3 15
35 49.62 precipitation 0.1 14400 > th dose dependent rect. 12 5
38 49.62 precipitation 0.1 14400 < th dose dependent rect. 3 15
41 49.63 precipitation 0.1 14400 < th dose independent rect. 3 17
43 49.63 precipitation 0.1 14400 < th dose dependent rect. 3 17
49 49.65 precipitation 0.1 14400 > th dose independent rect. 13 4
51 49.65 precipitation 0.1 14400 < th dose independent rect. 12 5
52 49.65 precipitation 0.1 14400 > th dose independent rect. 3 21
53 49.65 precipitation 0.1 14400 < th dose independent rect. 3 21
54 49.65 precipitation 0.1 14400 < th dose dependent rect. 12 5
55 49.65 precipitation 0.1 14400 > th dose dependent rect. 2 18
56 49.65 precipitation 0.1 14400 < th dose dependent rect. 3 21
69 49.69 precipitation 0.1 14400 > th dose dependent rect. 9 8
130 49.81 precipitation 0.1 14400 > th dose independent rect. 21 23
132 49.81 precipitation 0.1 14400 > th dose dependent rect. 15 2
136 49.82 humidity 80.0 43200 < th dose independent rect. 6 1
137 49.82 precipitation 0.1 14400 < th dose independent rect. 21 23
140 49.82 precipitation 0.1 14400 < th dose dependent rect. 21 23
147 49.84 precipitation 0.1 14400 > th dose independent rect. 15 2
250 49.91 precipitation 0.1 14400 > th dose dependent rect. 7 13
263 49.92 precipitation 0.1 14400 < th dose independent rect. 9 23
265 49.92 precipitation 0.1 14400 > th dose dependent rect. 9 11
270 49.92 precipitation 0.1 14400 < th dose dependent rect. 9 23
275 49.93 precipitation 0.1 14400 > th dose independent rect. 12 22
276 49.93 precipitation 0.1 14400 > th dose independent rect. 9 23
284 49.94 precipitation 0.1 14400 < th dose independent rect. 12 22
285 49.94 precipitation 0.1 14400 > th dose independent rect. 7 23
286 49.94 precipitation 0.1 14400 < th dose independent rect. 7 23
293 49.94 precipitation 0.1 14400 < th dose dependent rect. 12 22
294 49.94 precipitation 0.1 14400 < th dose dependent rect. 7 23
298 49.95 precipitation 0.1 14400 > th dose independent no NA NA
300 49.95 precipitation 0.1 14400 < th dose independent no NA NA
304 49.95 precipitation 0.1 14400 < th dose independent rect. 9 21
311 49.95 precipitation 0.1 14400 < th dose dependent no NA NA
312 49.95 wind 5.0 43200 < th dose dependent rect. 7 1
315 49.95 precipitation 0.1 14400 < th dose dependent rect. 9 21
322 49.96 precipitation 0.1 14400 > th dose independent rect. 7 17
323 49.96 precipitation 0.1 14400 < th dose independent rect. 7 17
327 49.96 precipitation 0.1 14400 > th dose independent rect. 9 21
334 49.96 precipitation 0.1 14400 > th dose independent rect. 15 23
339 49.96 precipitation 0.1 14400 < th dose dependent rect. 7 17
344 49.96 precipitation 0.1 14400 > th dose dependent rect. 2 22
349 49.97 precipitation 0.1 14400 < th dose independent rect. 9 15
363 49.97 precipitation 0.1 14400 < th dose independent rect. 15 23
365 49.97 precipitation 0.1 14400 < th dose dependent rect. 9 15
373 49.97 precipitation 0.1 14400 < th dose dependent rect. 15 23
393 49.98 precipitation 0.1 14400 < th dose independent rect. 19 23
404 49.98 precipitation 0.1 14400 < th dose dependent rect. 19 23
407 49.99 wind 1.0 14400 < th dose independent rect. 4 3
410 49.99 precipitation 0.1 14400 > th dose independent rect. 9 15
423 49.99 precipitation 0.1 14400 > th dose independent rect. 19 23
433 49.99 precipitation 0.1 14400 > th dose dependent rect. 9 23
453 50.00 precipitation 0.1 14400 > th dose dependent no NA NA
463 50.00 precipitation 0.1 14400 > th dose dependent rect. 7 23
464 50.00 precipitation 0.1 14400 > th dose dependent rect. 11 23
470 50.01 precipitation 0.1 14400 < th dose independent rect. 12 16
471 50.01 precipitation 0.1 14400 > th dose independent rect. 11 17
488 50.01 precipitation 0.1 14400 < th dose dependent rect. 12 16
496 50.01 precipitation 0.1 14400 > th dose dependent rect. 9 21
503 50.02 precipitation 0.1 14400 > th dose independent rect. 12 12
529 50.03 precipitation 0.1 14400 < th dose independent rect. 12 12
537 50.03 precipitation 0.1 14400 < th dose dependent rect. 12 12
546 50.03 precipitation 0.1 14400 > th dose dependent rect. 5 23
550 50.03 precipitation 0.1 14400 > th dose dependent rect. 15 23
601 50.05 precipitation 0.1 14400 > th dose dependent rect. 11 19
659 50.08 wind 1.0 14400 > th dose independent rect. 2 6
696 50.09 precipitation 0.1 14400 > th dose dependent rect. 19 23
697 50.10 wind 1.0 14400 > th dose independent rect. 4 4
826 50.17 precipitation 0.1 14400 > th dose dependent rect. 19 1
831 50.18 precipitation 0.1 14400 > th dose independent rect. 19 1
844 50.19 precipitation 0.1 14400 < th dose independent rect. 19 1
851 50.19 precipitation 0.1 14400 < th dose dependent rect. 19 1
852 50.19 wind 1.0 43200 < th dose dependent rect. 1 8
910 50.24 wind 1.0 14400 < th dose dependent rect. 2 6
967 50.31 precipitation 0.1 43200 > th dose dependent rect. 16 4
994 50.37 wind 1.0 14400 < th dose dependent rect. 4 4