Os06g0596300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl-ACP thioesterase (Fragment).
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Os06g0596300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acyl-ACP thioesterase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.45 | 0.394 | 11.7 | -0.162 | 0.713 | 0.757 | -0.29 | -0.0366 | -0.338 | 17.9 | 29.2 | 5002 | -- | -- |
| 70.45 | 0.391 | 11.7 | -0.168 | 0.713 | 0.755 | -0.293 | -- | -0.34 | 17.9 | 29.22 | 4998 | -- | -- |
| 70.62 | 0.391 | 11.7 | -0.159 | 0.713 | 0.762 | -- | -0.0344 | -0.339 | 18 | 29.29 | 4998 | -- | -- |
| 70.62 | 0.391 | 11.7 | -0.167 | 0.712 | 0.758 | -- | -- | -0.341 | 18 | 29.3 | 4998 | -- | -- |
| 92.42 | 0.448 | 11.7 | -0.262 | -- | 0.656 | -- | 0.263 | -0.18 | -- | 28.7 | 7026 | -- | -- |
| 91.17 | 0.448 | 11.7 | -0.384 | 0.676 | -- | -0.421 | -- | -0.329 | 17.5 | -- | -- | -- | -- |
| 91.55 | 0.448 | 11.7 | -0.384 | 0.675 | -- | -- | -- | -0.332 | 17.6 | -- | -- | -- | -- |
| 91.63 | 0.446 | 11.7 | -0.163 | -- | 0.748 | -- | -- | -0.253 | -- | 28.8 | 5612 | -- | -- |
| 71.34 | 0.393 | 11.7 | -- | 0.712 | 0.774 | -- | -- | -0.321 | 18 | 29.2 | 4998 | -- | -- |
| 115.2 | 0.502 | 11.7 | -0.406 | -- | -- | -- | -- | -0.348 | -- | -- | -- | -- | -- |
| 95.44 | 0.457 | 11.7 | -- | 0.681 | -- | -- | -- | -0.289 | 17.6 | -- | -- | -- | -- |
| 92.19 | 0.447 | 11.7 | -- | -- | 0.761 | -- | -- | -0.228 | -- | 28.74 | 5632 | -- | -- |
| 119.54 | 0.51 | 11.7 | -- | -- | -- | -- | -- | -0.303 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.52 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 24 | 9 |
| 7 | 68.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 15 | 69.07 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 24 | 69.36 | temperature | 25.0 | 4320 | > th | dose independent | sin | 9 | NA |
| 34 | 69.48 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 51 | 69.71 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 9 |
| 55 | 69.77 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 77 | 69.93 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 4 |
| 80 | 69.94 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 82 | 69.94 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 9 |
| 88 | 69.99 | temperature | 25.0 | 4320 | < th | dose independent | sin | 9 | NA |
| 128 | 70.23 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 129 | 70.23 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 139 | 70.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 141 | 70.31 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 10 | NA |
| 142 | 70.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 219 | 70.59 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 2 | 5 |
| 249 | 70.77 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 257 | 70.81 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 335 | 71.12 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 348 | 71.16 | temperature | 25.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 356 | 71.22 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 357 | 71.22 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 361 | 71.23 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 364 | 71.24 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 19 | 3 |
| 405 | 71.37 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 420 | 71.41 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 427 | 71.42 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 460 | 71.51 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 465 | 71.51 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 489 | 71.58 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 492 | 71.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 498 | 71.60 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 511 | 71.63 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 604 | 71.80 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 621 | 71.82 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 670 | 71.89 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 691 | 71.92 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 702 | 71.93 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 4 | 7 |
| 740 | 71.97 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 4 |
| 761 | 71.99 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 989 | 72.18 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 3 |