BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0618800 Os11g0618800|J023004F01
(97 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0618800 Protein of unknown function DUF594 family protein 196 2e-51
Os11g0618500 Protein of unknown function DUF594 family protein 135 5e-33
Os11g0618700 Protein of unknown function DUF594 family protein 124 2e-29
Os11g0171000 92 6e-20
Os11g0618000 92 7e-20
Os11g0619500 91 2e-19
Os11g0617200 75 1e-14
Os10g0450400 Protein of unknown function DUF594 family protein 73 4e-14
Os03g0142300 Protein of unknown function DUF594 family protein 66 5e-12
>Os11g0618800 Protein of unknown function DUF594 family protein
Length = 97
Score = 196 bits (499), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/97 (100%), Positives = 97/97 (100%)
Query: 1 QGALLANALIKKEGQACLWEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWALF 60
QGALLANALIKKEGQACLWEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWALF
Sbjct: 1 QGALLANALIKKEGQACLWEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWALF 60
Query: 61 CHCGIEKSELWQEKKGAKSGNDTPGLVNQSSPASGMS 97
CHCGIEKSELWQEKKGAKSGNDTPGLVNQSSPASGMS
Sbjct: 61 CHCGIEKSELWQEKKGAKSGNDTPGLVNQSSPASGMS 97
>Os11g0618500 Protein of unknown function DUF594 family protein
Length = 435
Score = 135 bits (341), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 75/94 (79%)
Query: 1 QGALLANALIKKEGQACLWEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWALF 60
QGA+LAN LIKKE Q C WEIL++VW HL+VHIAPSS+ A A+DLKS EF+T+IWALF
Sbjct: 312 QGAILANELIKKEDQKCRWEILSDVWVHLLVHIAPSSDAAALAEDLKSGVEFVTVIWALF 371
Query: 61 CHCGIEKSELWQEKKGAKSGNDTPGLVNQSSPAS 94
CHCGIEKS+LWQ++K A N TPG NQSS S
Sbjct: 372 CHCGIEKSKLWQQQKSANFRNSTPGPSNQSSDVS 405
>Os11g0618700 Protein of unknown function DUF594 family protein
Length = 788
Score = 124 bits (310), Expect = 2e-29, Method: Composition-based stats.
Identities = 56/73 (76%), Positives = 65/73 (89%), Gaps = 1/73 (1%)
Query: 1 QGALLANALI-KKEGQACLWEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWAL 59
QGA++ANALI +E +AC WEILAEVW HLIVHIAPSS +EAHA++LKS +EFIT+IWAL
Sbjct: 716 QGAIMANALIVNEEDEACRWEILAEVWAHLIVHIAPSSRIEAHAENLKSGSEFITVIWAL 775
Query: 60 FCHCGIEKSELWQ 72
F HCGIEKSELWQ
Sbjct: 776 FSHCGIEKSELWQ 788
>Os11g0171000
Length = 919
Score = 92.4 bits (228), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 1 QGALLANALI-KKEGQACLWEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWAL 59
QG LA LI K+ +AC W+ILAEVW L+VHIAPS N H +L+S EFITLIWAL
Sbjct: 616 QGVTLAKDLIGMKDDEAC-WKILAEVWADLLVHIAPSWNASDHKNNLESGGEFITLIWAL 674
Query: 60 FCHCGIEKSELWQEKKGAKSGNDTP 84
HCGIEKS LW + + ++ + P
Sbjct: 675 LWHCGIEKSSLWHKDEAFENNSQVP 699
>Os11g0618000
Length = 1144
Score = 92.4 bits (228), Expect = 7e-20, Method: Composition-based stats.
Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 1 QGALLANALIKKEGQACLWEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWALF 60
+GA LA L E + WEILA+VW L+VH++PSS+ + HAK L+S+ EFIT+IWALF
Sbjct: 1012 EGARLAKKL-HDEDKKKQWEILAKVWARLLVHLSPSSDAQVHAKHLRSNMEFITIIWALF 1070
Query: 61 CHCGIEKSELW 71
HCGI+KSELW
Sbjct: 1071 SHCGIDKSELW 1081
>Os11g0619500
Length = 1402
Score = 90.5 bits (223), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 1 QGALLANALIKKEGQACLWEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWALF 60
QGA LA+ L+K+E + C WEIL+ VW L++H+APS N AH K L+S EFIT IWAL
Sbjct: 874 QGAKLADKLMKEENEDC-WEILSGVWTELLIHLAPSWNASAHKKCLESGGEFITHIWALL 932
Query: 61 CHCGIEKSELW 71
HCGIEKS LW
Sbjct: 933 WHCGIEKSMLW 943
>Os11g0617200
Length = 714
Score = 75.1 bits (183), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
Query: 19 WEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWALFCHCGIEKSELWQEKKGAK 78
W+ILA VW L+VHIAPS N EAH L+ E IT IW L +CGIEKS LW+++
Sbjct: 491 WQILAGVWADLLVHIAPSWNAEAHKICLEYGGELITFIWGLLWYCGIEKSSLWRDQ---- 546
Query: 79 SGNDTPGLVN---QSSPAS 94
+D PG N Q PA+
Sbjct: 547 --DDAPGDANVQPQPQPAA 563
>Os10g0450400 Protein of unknown function DUF594 family protein
Length = 811
Score = 73.2 bits (178), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 1 QGALLANALIKKEGQACLWEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWALF 60
+ A +A +L++ E WE+LA VW ++VHIAPS N AH K L + EF+T IWA+
Sbjct: 664 RSAQVAKSLVETEVMD-RWEMLAGVWAEMLVHIAPSWNAAAHKKCLSTGGEFVTQIWAIL 722
Query: 61 CHCGIEKSELWQEKKGAKSGND 82
HC I++S LW ++ +S ND
Sbjct: 723 SHCNIQESNLWPQQ---ESPND 741
>Os03g0142300 Protein of unknown function DUF594 family protein
Length = 238
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 1 QGALLANALIKKEGQACLWEILAEVWGHLIVHIAPSSNVEAHAKDLKSDTEFITLIWALF 60
+G LA+ L K G+ W LAE W L++ +APS +V AH K L EFIT +WAL
Sbjct: 134 KGKALADKL-KARGRVD-WTELAEFWSELLISLAPSGSVSAHEKGLGDGGEFITHLWALL 191
Query: 61 CHCGIEKSELWQEKKGAKSGNDTPGLVNQSSPASGMS 97
H GI+ W G+ +G D+ G + S+ +G +
Sbjct: 192 YHAGIDDKFTWSTATGSTAGGDSGGTADNSTFQNGTA 228
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.130 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,559,399
Number of extensions: 121058
Number of successful extensions: 309
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 322
Number of HSP's successfully gapped: 9
Length of query: 97
Length of database: 17,035,801
Length adjustment: 66
Effective length of query: 31
Effective length of database: 13,589,677
Effective search space: 421279987
Effective search space used: 421279987
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 149 (62.0 bits)