Os11g0618800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
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Os11g0618800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF594 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 168.49 | 0.61 | 6.03 | -0.178 | 2.54 | 2.38 | 0.57 | 1.13 | 0.836 | 19.7 | 13.91 | 312 | 20.8 | 14.9 |
| 168.87 | 0.605 | 6.05 | -0.286 | 2.69 | 2.39 | 0.00901 | -- | 0.797 | 19.6 | 13.1 | 319 | 20.7 | 14.8 |
| 168.76 | 0.605 | 6.06 | -0.257 | 2.63 | 2.38 | -- | 0.504 | 0.786 | 19.6 | 13.61 | 318 | 20.7 | 14.9 |
| 168.56 | 0.605 | 6.05 | -0.282 | 2.72 | 2.42 | -- | -- | 0.806 | 19.6 | 12.19 | 324 | 20.7 | 14.9 |
| 246.44 | 0.731 | 5.99 | -0.411 | -- | 1.33 | -- | -0.122 | 0.726 | -- | 19.06 | 981 | 21.9 | 15.8 |
| 233.35 | 0.716 | 5.95 | 0.034 | 0.967 | -- | -0.344 | -- | 1.03 | 20 | -- | -- | -- | -- |
| 233.7 | 0.716 | 5.96 | 0.0437 | 0.967 | -- | -- | -- | 1.03 | 20 | -- | -- | -- | -- |
| 244.26 | 0.728 | 5.99 | -0.352 | -- | 1.37 | -- | -- | 0.776 | -- | 18.72 | 904 | 22.7 | 16.5 |
| 169.38 | 0.606 | 6.04 | -- | 3.43 | 2.9 | -- | -- | 0.919 | 19.4 | 6.851 | 344 | 20.7 | 14.5 |
| 284.69 | 0.788 | 5.93 | 0.0337 | -- | -- | -- | -- | 1.02 | -- | -- | -- | -- | -- |
| 233.75 | 0.715 | 5.96 | -- | 0.967 | -- | -- | -- | 1.03 | 20 | -- | -- | -- | -- |
| 206.09 | 0.669 | 5.99 | -- | -- | 1.46 | -- | -- | 0.848 | -- | 17.28 | 1084 | 8.75 | 2.78 |
| 284.72 | 0.788 | 5.93 | -- | -- | -- | -- | -- | 1.02 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.28 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 15 |
| 8 | 174.76 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 15 |
| 28 | 178.05 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 32 | 178.87 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 46 | 179.79 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 123 | 185.34 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 155 | 186.67 | temperature | 10.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 156 | 186.75 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 170 | 187.13 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 177 | 187.35 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 183 | 187.61 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 6 |
| 185 | 187.71 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 193 | 187.83 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 22 | 17 |
| 204 | 188.16 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 214 | 188.40 | temperature | 30.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 221 | 188.63 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 223 | 188.67 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 254 | 189.28 | temperature | 30.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 305 | 190.22 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 307 | 190.24 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 17 |
| 377 | 191.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 401 | 191.70 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 515 | 192.87 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 533 | 193.05 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 14 |
| 635 | 194.05 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 644 | 194.12 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 653 | 194.22 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 22 |
| 665 | 194.39 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 683 | 194.55 | temperature | 25.0 | 30 | < th | dose dependent | sin | 0 | NA |
| 691 | 194.62 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 694 | 194.63 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 700 | 194.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 750 | 195.22 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 754 | 195.24 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 815 | 195.57 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 845 | 195.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 847 | 195.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 850 | 195.85 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 880 | 196.03 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 887 | 196.10 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 913 | 196.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 920 | 196.31 | temperature | 20.0 | 270 | < th | dose independent | sin | 8 | NA |
| 932 | 196.39 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 933 | 196.41 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 945 | 196.50 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 953 | 196.53 | temperature | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 979 | 196.67 | humidity | 90.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 984 | 196.68 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 6 |