Os11g0618500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0618500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF594 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.26 | 0.416 | 8.26 | -0.3 | 0.461 | -1.13 | -0.198 | 0.366 | -0.00489 | 0.517 | 27.99 | 126 | -- | -- |
| 78.39 | 0.412 | 8.25 | -0.235 | 0.459 | -1.14 | -0.093 | -- | 0.00944 | 0.516 | 27.8 | 125 | -- | -- |
| 78.38 | 0.412 | 8.26 | -0.266 | 0.465 | -1.15 | -- | 0.199 | 0.000612 | 0.586 | 27.93 | 125 | -- | -- |
| 78.44 | 0.412 | 8.25 | -0.231 | 0.463 | -1.15 | -- | -- | 0.00761 | 0.57 | 27.8 | 125 | -- | -- |
| 85.53 | 0.431 | 8.26 | -0.345 | -- | -0.93 | -- | 0.698 | 0.014 | -- | 27.91 | 738 | -- | -- |
| 96.45 | 0.46 | 8.2 | 0.0485 | 0.286 | -- | -0.321 | -- | 0.255 | 21.4 | -- | -- | -- | -- |
| 96.82 | 0.461 | 8.2 | 0.0598 | 0.287 | -- | -- | -- | 0.255 | 21.5 | -- | -- | -- | -- |
| 85.99 | 0.432 | 8.24 | -0.219 | -- | -0.971 | -- | -- | 0.0403 | -- | 26.96 | 827 | -- | -- |
| 79.71 | 0.416 | 8.24 | -- | 0.438 | -1.05 | -- | -- | 0.0524 | 0.385 | 27.77 | 124 | -- | -- |
| 101.67 | 0.471 | 8.19 | 0.0618 | -- | -- | -- | -- | 0.254 | -- | -- | -- | -- | -- |
| 96.91 | 0.461 | 8.2 | -- | 0.287 | -- | -- | -- | 0.248 | 21.5 | -- | -- | -- | -- |
| 87.09 | 0.435 | 8.23 | -- | -- | -0.878 | -- | -- | 0.0827 | -- | 27.29 | 739 | -- | -- |
| 101.77 | 0.471 | 8.19 | -- | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 4 | 73.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 6 | 73.67 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 19 |
| 7 | 73.89 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 11 | 74.07 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 15 | 17 |
| 33 | 75.45 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 36 | 75.55 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 17 |
| 96 | 76.58 | atmosphere | 1010 | 90 | < th | dose independent | rect. | 8 | 20 |
| 143 | 77.36 | temperature | 20 | 90 | > th | dose independent | rect. | 8 | 20 |
| 145 | 77.38 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 21 | 18 |
| 154 | 77.54 | temperature | 30 | 90 | < th | dose dependent | rect. | 2 | 23 |
| 195 | 78.13 | temperature | 15 | 10 | > th | dose dependent | rect. | 18 | 23 |
| 204 | 78.22 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 212 | 78.25 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 213 | 78.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 230 | 78.38 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 19 |
| 238 | 78.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 23 |
| 314 | 79.01 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 353 | 79.29 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 354 | 79.30 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 358 | 79.35 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 18 |
| 364 | 79.38 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 375 | 79.45 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 378 | 79.46 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 18 | 21 |
| 383 | 79.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 398 | 79.57 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 420 | 79.67 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 463 | 79.91 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 478 | 79.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 21 |
| 490 | 80.02 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 521 | 80.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 573 | 80.44 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 624 | 80.63 | atmosphere | 1010 | 90 | < th | dose independent | rect. | 8 | 7 |
| 701 | 80.90 | temperature | 30 | 90 | < th | dose dependent | sin | 6 | NA |
| 709 | 80.92 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 711 | 80.93 | wind | 9 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 733 | 81.00 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 764 | 81.12 | temperature | 10 | 90 | > th | dose dependent | sin | 6 | NA |
| 778 | 81.16 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 798 | 81.20 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 807 | 81.22 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 824 | 81.26 | wind | 9 | 14400 | < th | dose independent | rect. | 21 | 20 |
| 828 | 81.27 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 8 |
| 843 | 81.29 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 848 | 81.30 | wind | 9 | 14400 | < th | dose independent | sin | 4 | NA |
| 875 | 81.35 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 21 | 18 |
| 888 | 81.37 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 898 | 81.39 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 905 | 81.40 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 912 | 81.41 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 8 |
| 948 | 81.46 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 963 | 81.48 | wind | 9 | 14400 | < th | dose independent | rect. | 21 | 17 |
| 967 | 81.48 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 20 | 19 |