Os10g0450400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0450400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF594 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 202.63 | 0.669 | 6.12 | -0.254 | 1.9 | -2.01 | -0.232 | 14.6 | -0.41 | 1.8 | 25.47 | 4431 | -- | -- |
| 247.05 | 0.732 | 6.46 | -2.56 | 1.85 | -1.37 | 0.407 | -- | -0.609 | 1.7 | 3.211 | 23212 | -- | -- |
| 202.22 | 0.662 | 6.12 | -0.149 | 1.86 | -2.13 | -- | 15.5 | -0.461 | 1.78 | 26.08 | 4509 | -- | -- |
| 244.34 | 0.728 | 6.45 | -2.75 | 1.91 | -1.35 | -- | -- | -0.64 | 1.85 | 11.16 | 22021 | -- | -- |
| 344.88 | 0.87 | 6.44 | -2.87 | -- | -2.96 | -- | 6.56 | -0.886 | -- | 26.08 | 4509 | -- | -- |
| 272.7 | 0.774 | 6.56 | -3.88 | 1.89 | -- | -0.213 | -- | -1.15 | 1.87 | -- | -- | -- | -- |
| 272.87 | 0.774 | 6.56 | -3.88 | 1.89 | -- | -- | -- | -1.15 | 1.89 | -- | -- | -- | -- |
| 341.69 | 0.865 | 6.44 | -3.22 | -- | -3.19 | -- | -- | -0.68 | -- | 11.16 | 22021 | -- | -- |
| 307.91 | 0.817 | 6.26 | -- | 1.94 | -3.06 | -- | -- | 0.199 | 1.86 | 4.523 | 47520 | -- | -- |
| 487.87 | 1.03 | 6.54 | -3.8 | -- | -- | -- | -- | -1.1 | -- | -- | -- | -- | -- |
| 669.3 | 1.21 | 6.46 | -- | 1.81 | -- | -- | -- | -0.715 | 1.83 | -- | -- | -- | -- |
| 533.78 | 1.08 | 6.25 | -- | -- | -2.95 | -- | -- | 0.191 | -- | 8.221 | 46387 | -- | -- |
| 868.9 | 1.38 | 6.44 | -- | -- | -- | -- | -- | -0.682 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.19 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 200.31 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 16 |
| 4 | 200.93 | temperature | 25 | 4320 | > th | dose dependent | sin | 11 | NA |
| 12 | 201.67 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 28 | 201.67 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 46 | 202.02 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 13 |
| 50 | 202.12 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 20 |
| 85 | 203.28 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 16 |
| 101 | 203.78 | temperature | 25 | 4320 | > th | dose independent | sin | 8 | NA |
| 138 | 204.46 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 16 |
| 160 | 204.85 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 161 | 204.86 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 163 | 204.88 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 23 |
| 173 | 204.97 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 183 | 205.02 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 205 | 205.14 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 280 | 205.55 | temperature | 25 | 4320 | > th | dose independent | rect. | 24 | 11 |
| 283 | 205.58 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 304 | 205.74 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 316 | 205.85 | temperature | 25 | 4320 | < th | dose independent | sin | 8 | NA |
| 339 | 205.97 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 361 | 206.11 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 380 | 206.35 | temperature | 25 | 4320 | < th | dose independent | rect. | 24 | 11 |
| 386 | 206.43 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 392 | 206.49 | radiation | 20 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 394 | 206.50 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 398 | 206.54 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 9 |
| 401 | 206.55 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 6 |
| 407 | 206.64 | radiation | 20 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 428 | 206.71 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 459 | 206.79 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 469 | 206.83 | radiation | 20 | 43200 | < th | dose independent | sin | 16 | NA |
| 533 | 207.05 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 5 |
| 569 | 207.27 | radiation | 30 | 43200 | < th | dose dependent | rect. | 15 | 18 |
| 573 | 207.32 | radiation | 20 | 43200 | > th | dose dependent | sin | 14 | NA |
| 582 | 207.38 | radiation | 10 | 43200 | > th | dose dependent | rect. | 15 | 17 |
| 586 | 207.40 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 19 |
| 591 | 207.43 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 654 | 207.58 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 677 | 207.67 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 719 | 207.81 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 12 |
| 728 | 207.84 | radiation | 40 | 43200 | > th | dose dependent | sin | 14 | NA |
| 750 | 207.88 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 769 | 207.90 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 774 | 207.91 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 786 | 207.95 | temperature | 25 | 4320 | > th | dose independent | rect. | 2 | 7 |
| 885 | 208.19 | radiation | 20 | 43200 | > th | dose independent | sin | 12 | NA |
| 903 | 208.22 | radiation | 20 | 43200 | < th | dose independent | rect. | 7 | 11 |
| 911 | 208.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 6 |
| 952 | 208.33 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 953 | 208.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 23 | 6 |
| 986 | 208.38 | radiation | 10 | 43200 | > th | dose dependent | rect. | 15 | 1 |