BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0483900 Os11g0483900|AK070344
(250 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0483900 Engulfment and cell motility, ELM domain conta... 522 e-149
Os02g0652300 Engulfment and cell motility, ELM domain conta... 350 7e-97
Os04g0545100 Engulfment and cell motility, ELM domain conta... 321 3e-88
Os04g0101700 Engulfment and cell motility, ELM domain conta... 281 3e-76
Os03g0322800 Engulfment and cell motility, ELM domain conta... 271 2e-73
Os12g0126200 Engulfment and cell motility, ELM domain conta... 249 1e-66
>Os11g0483900 Engulfment and cell motility, ELM domain containing protein
Length = 250
Score = 522 bits (1345), Expect = e-149, Method: Compositional matrix adjust.
Identities = 250/250 (100%), Positives = 250/250 (100%)
Query: 1 MVLGQLALWSKIANEASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHR 60
MVLGQLALWSKIANEASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHR
Sbjct: 1 MVLGQLALWSKIANEASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHR 60
Query: 61 MKVYFDPSRRDHQEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLE 120
MKVYFDPSRRDHQEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLE
Sbjct: 61 MKVYFDPSRRDHQEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLE 120
Query: 121 NLLFFAKTFSASFQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAV 180
NLLFFAKTFSASFQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAV
Sbjct: 121 NLLFFAKTFSASFQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAV 180
Query: 181 FIQMLSEDEWAFDLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRI 240
FIQMLSEDEWAFDLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRI
Sbjct: 181 FIQMLSEDEWAFDLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRI 240
Query: 241 EDMPSYSLLC 250
EDMPSYSLLC
Sbjct: 241 EDMPSYSLLC 250
>Os02g0652300 Engulfment and cell motility, ELM domain containing protein
Length = 269
Score = 350 bits (897), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 160/247 (64%), Positives = 200/247 (80%)
Query: 4 GQLALWSKIANEASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKV 63
G A + E GS WIGK LSCVC +R+ + R+ +LTPVQEE LQRL++R++V
Sbjct: 22 GAAAFHHSSSAEVVTGSTAWIGKGLSCVCAQRRDSDARLSFDLTPVQEECLQRLQNRLEV 81
Query: 64 YFDPSRRDHQEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLL 123
+D S DHQEALK LW A++P EL+GLISEQWK+MGWQG+DPSTDFRG GFISLENL+
Sbjct: 82 QYDSSNSDHQEALKDLWRASFPGAELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLV 141
Query: 124 FFAKTFSASFQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQ 183
+F+K F SFQ LL+KQ G+RA WEYPFAVAGVNITFM++QMLDLQS KPR+F+ AVF++
Sbjct: 142 YFSKNFPKSFQELLRKQNGDRAIWEYPFAVAGVNITFMLIQMLDLQSVKPRSFIGAVFLK 201
Query: 184 MLSEDEWAFDLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRIEDM 243
+LSE++ AFD+LYC+ F +MD+QWLD +A+YMDFN ++KSTR QLERELLL+D+ RIEDM
Sbjct: 202 LLSENDQAFDILYCITFKLMDQQWLDMHATYMDFNTVMKSTRRQLERELLLEDIQRIEDM 261
Query: 244 PSYSLLC 250
PSY LL
Sbjct: 262 PSYKLLA 268
>Os04g0545100 Engulfment and cell motility, ELM domain containing protein
Length = 266
Score = 321 bits (823), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 189/235 (80%)
Query: 15 EASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKVYFDPSRRDHQE 74
E GS WIG+ SCVC +R+ + +RI +L+P QE LQRL++R++V +D S +HQE
Sbjct: 30 EVVAGSTAWIGRGFSCVCAQRRDSDQRISFDLSPAQECCLQRLQNRIEVPYDGSNGEHQE 89
Query: 75 ALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSASFQ 134
ALK LWH ++P EL GL+S+QWK+MGWQG+DPSTDFRG GFISLENLL+FAK ++ SFQ
Sbjct: 90 ALKTLWHVSFPGTELLGLVSDQWKEMGWQGKDPSTDFRGGGFISLENLLYFAKNYTKSFQ 149
Query: 135 RLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLSEDEWAFDL 194
LL KQ G+RA WEYPFAVAGVNITFM++QMLDLQ+ KPR+ + +VF+ +L E++ AFD+
Sbjct: 150 ELLCKQNGDRALWEYPFAVAGVNITFMLIQMLDLQAAKPRSLIGSVFLNLLLENDRAFDI 209
Query: 195 LYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRIEDMPSYSLL 249
LYC+ F +MD +WL+ +A+YMDFN ++KSTR QLERELLL+D+ RIEDMPSY L
Sbjct: 210 LYCITFKLMDHKWLEMHANYMDFNAVIKSTRRQLERELLLEDIQRIEDMPSYRFL 264
>Os04g0101700 Engulfment and cell motility, ELM domain containing protein
Length = 234
Score = 281 bits (720), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 131/232 (56%), Positives = 177/232 (76%), Gaps = 1/232 (0%)
Query: 18 CGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKVYFDPSRRDHQEALK 77
G+ W G + +R+ E+ L+PVQE+RLQ+L+ R+ + +D +RRDHQEAL+
Sbjct: 2 VGNRIWFGGLFTSSGRRRQINAEK-TFELSPVQEQRLQKLKERLNIPYDQTRRDHQEALR 60
Query: 78 ALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSASFQRLL 137
ALW A++PD EL LISEQWKDMGWQG +PSTDFRG GF+ LENLLFFA T+ AS+QRLL
Sbjct: 61 ALWSASFPDAELSSLISEQWKDMGWQGPNPSTDFRGCGFVGLENLLFFATTYPASYQRLL 120
Query: 138 KKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLSEDEWAFDLLYC 197
K+ G RATWEYPFAVAGVN+++M++Q+L+L + +P++ FI++LSE E AFD+LYC
Sbjct: 121 LKKQGMRATWEYPFAVAGVNVSYMLIQLLELNAERPKSLPGINFIKVLSEHEEAFDVLYC 180
Query: 198 VAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRIEDMPSYSLL 249
+AF +MD QWL ASYM F ++L++T+ QLEREL L+DV I D+P+Y+LL
Sbjct: 181 IAFEMMDAQWLAMRASYMQFKDVLEATKQQLERELSLEDVNGIRDIPAYNLL 232
>Os03g0322800 Engulfment and cell motility, ELM domain containing protein
Length = 317
Score = 271 bits (694), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 163/204 (79%)
Query: 46 LTPVQEERLQRLRHRMKVYFDPSRRDHQEALKALWHATYPDQELQGLISEQWKDMGWQGR 105
L+P+QE+RL LR R+++ FD SR +HQ+AL+ LW YP++++ L SE WK+MGWQG
Sbjct: 112 LSPLQEDRLNTLRSRLQIPFDGSRVEHQDALRQLWRLAYPNRDIPPLKSELWKEMGWQGT 171
Query: 106 DPSTDFRGAGFISLENLLFFAKTFSASFQRLLKKQCGNRATWEYPFAVAGVNITFMIMQM 165
DPSTDFRG GFISLENL+FFA+ + SFQ LL K G RA WEYPFAVAG+NI+FM++QM
Sbjct: 172 DPSTDFRGGGFISLENLIFFARNYPGSFQALLNKVQGQRADWEYPFAVAGINISFMLIQM 231
Query: 166 LDLQSTKPRTFVRAVFIQMLSEDEWAFDLLYCVAFVVMDKQWLDKNASYMDFNEILKSTR 225
LDLQS+ P + F+++L DE AFD LYC+AF ++D QWL K ASYM+FNE+LKSTR
Sbjct: 232 LDLQSSVPSSKSGVRFVELLGRDENAFDHLYCIAFRLLDAQWLVKRASYMEFNEVLKSTR 291
Query: 226 TQLERELLLDDVMRIEDMPSYSLL 249
TQLEREL+L+DV+ ++D+PSY++L
Sbjct: 292 TQLERELVLEDVLEVKDLPSYTML 315
>Os12g0126200 Engulfment and cell motility, ELM domain containing protein
Length = 320
Score = 249 bits (637), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 166/240 (69%), Gaps = 2/240 (0%)
Query: 11 KIANEASCGSPRWIGKSLSCVCIKRKGAYER-ICMNLTPVQEERLQRLRHRMKVYFDPSR 69
KI N S P + K S C E+ + ++L+P+QEERL+ LR R+ V FD S
Sbjct: 80 KIGNALSQFGP-LLAKFFSRSCASHGSHDEQAVLLDLSPLQEERLRFLRQRLNVPFDSSS 138
Query: 70 RDHQEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTF 129
HQ+ALK LW YP ++L L S+ WK+MGWQ DP+TDFR GF+SLENL++FA+ +
Sbjct: 139 VKHQDALKELWRLAYPSRQLPPLKSDLWKEMGWQNSDPATDFRAGGFMSLENLIYFARNY 198
Query: 130 SASFQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLSEDE 189
SF LL K G R+ WEYPFAVAGVNI++M++QMLDLQS K T V + F+Q+L EDE
Sbjct: 199 PDSFHSLLHKADGKRSEWEYPFAVAGVNISYMLVQMLDLQSGKMGTKVSSQFVQLLREDE 258
Query: 190 WAFDLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRIEDMPSYSLL 249
AFD L+C+AF ++D QWL + ASYM+FNE+LKS R QLE+EL + + +++MPS+ LL
Sbjct: 259 MAFDNLFCMAFQMLDAQWLTRQASYMEFNEVLKSMRIQLEQELTIGSISCVQEMPSFRLL 318
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,440,591
Number of extensions: 326485
Number of successful extensions: 901
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 901
Number of HSP's successfully gapped: 6
Length of query: 250
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 152
Effective length of database: 11,918,829
Effective search space: 1811662008
Effective search space used: 1811662008
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 155 (64.3 bits)