Os11g0483900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Engulfment and cell motility, ELM domain containing protein.
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Os11g0483900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Engulfment and cell motility, ELM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.14 | 0.578 | 7.49 | -2.53 | 1.52 | 2.34 | 1.52 | -5.72 | -0.692 | 4 | 25.98 | 1145 | -- | -- |
| 159.14 | 0.588 | 7.33 | -1.23 | 1.52 | 1.73 | 1.29 | -- | -0.369 | 3.88 | 26.25 | 1159 | -- | -- |
| 157.57 | 0.585 | 7.48 | -2.44 | 1.52 | 2.3 | -- | -5.23 | -0.653 | 3.96 | 26.14 | 1158 | -- | -- |
| 163.99 | 0.596 | 7.33 | -1.25 | 1.51 | 1.74 | -- | -- | -0.382 | 3.85 | 26.2 | 1163 | -- | -- |
| 276.25 | 0.774 | 7.52 | -2.5 | -- | 2.61 | -- | -4.79 | -0.817 | -- | 24.9 | 1180 | -- | -- |
| 266.08 | 0.765 | 7.31 | -0.708 | 1.74 | -- | 1.62 | -- | -0.305 | 3.3 | -- | -- | -- | -- |
| 274.47 | 0.776 | 7.32 | -0.739 | 1.75 | -- | -- | -- | -0.314 | 3.28 | -- | -- | -- | -- |
| 283.18 | 0.784 | 7.37 | -1.33 | -- | 2.14 | -- | -- | -0.512 | -- | 24.96 | 1184 | -- | -- |
| 202.16 | 0.662 | 7.3 | -- | 1.52 | 1.45 | -- | -- | -0.201 | 3.72 | 26.93 | 1170 | -- | -- |
| 447.31 | 0.988 | 7.32 | -0.665 | -- | -- | -- | -- | -0.268 | -- | -- | -- | -- | -- |
| 288.86 | 0.795 | 7.3 | -- | 1.73 | -- | -- | -- | -0.232 | 3.28 | -- | -- | -- | -- |
| 326.06 | 0.841 | 7.33 | -- | -- | 1.83 | -- | -- | -0.3 | -- | 25.4 | 1176 | -- | -- |
| 458.96 | 1 | 7.3 | -- | -- | -- | -- | -- | -0.194 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.34 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 3 | 160.98 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 9 | 162.19 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 23 | 164.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 24 | 164.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 34 | 164.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 47 | 165.20 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 57 | 165.37 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 62 | 165.47 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 90 | 165.81 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 16 |
| 93 | 165.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 232 | 166.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 238 | 166.77 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 299 | 167.49 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 400 | 171.03 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 430 | 172.32 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 463 | 173.28 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 506 | 173.88 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 524 | 173.91 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 13 |
| 545 | 174.16 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 571 | 174.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 586 | 174.52 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 591 | 174.62 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 604 | 174.79 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 612 | 174.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 613 | 174.91 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 627 | 174.93 | temperature | 30 | 1440 | > th | dose independent | sin | 14 | NA |
| 642 | 175.11 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 655 | 175.17 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 670 | 175.18 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 674 | 175.22 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 692 | 175.28 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 713 | 175.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 715 | 175.35 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 716 | 175.35 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 746 | 175.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 747 | 175.45 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 748 | 175.45 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 763 | 175.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 776 | 175.50 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 808 | 175.63 | temperature | 30 | 1440 | < th | dose independent | sin | 15 | NA |
| 809 | 175.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 813 | 175.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 826 | 175.72 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 829 | 175.74 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 7 |
| 849 | 175.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 867 | 175.81 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 19 |
| 869 | 175.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 873 | 175.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 883 | 175.87 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 978 | 175.90 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 979 | 175.91 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 982 | 175.92 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 992 | 176.03 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 20 |