BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0483900 Os11g0483900|AK070344
(250 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G67400.1 | chr1:25248099-25250664 REVERSE LENGTH=282 396 e-111
AT2G44770.1 | chr2:18457817-18459886 FORWARD LENGTH=267 322 8e-89
AT3G60260.1 | chr3:22274303-22276839 FORWARD LENGTH=267 312 1e-85
AT1G03620.1 | chr1:904319-906013 REVERSE LENGTH=266 283 6e-77
AT3G03610.1 | chr3:869479-871687 FORWARD LENGTH=324 281 3e-76
AT3G43400.1 | chr3:15332136-15333703 FORWARD LENGTH=214 234 5e-62
>AT1G67400.1 | chr1:25248099-25250664 REVERSE LENGTH=282
Length = 281
Score = 396 bits (1017), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/239 (78%), Positives = 213/239 (89%), Gaps = 2/239 (0%)
Query: 13 ANEASCGS-PRW-IGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKVYFDPSRR 70
A +ASC S P W I KSL+CVC RK AYERIC NLTP+QEERL+RLR RMK Y+D SR
Sbjct: 42 AEDASCSSTPSWRIKKSLTCVCFNRKRAYERICSNLTPLQEERLKRLRKRMKNYYDASRP 101
Query: 71 DHQEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFS 130
DHQ+AL+ALW ATYPD++LQ LIS+QWK+MGWQG+DPSTDFRGAGFISLENLLFFAKTFS
Sbjct: 102 DHQDALRALWSATYPDEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLFFAKTFS 161
Query: 131 ASFQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLSEDEW 190
SFQRLL KQ G RA WEYPFAVAGVNITFMIMQMLDL+++KPR+F+R VF+QMLSE EW
Sbjct: 162 TSFQRLLNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSESEW 221
Query: 191 AFDLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRIEDMPSYSLL 249
AFDLLYCVAFVVMDKQWLDKNA+YM+FN++L+ TR QLEREL++DDV RIEDMPS+SLL
Sbjct: 222 AFDLLYCVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLERELMMDDVFRIEDMPSFSLL 280
>AT2G44770.1 | chr2:18457817-18459886 FORWARD LENGTH=267
Length = 266
Score = 322 bits (826), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 194/243 (79%)
Query: 7 ALWSKIANEASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKVYFD 66
++++ + EA GS W+G+ LSCVC +R+ + +LTP QEE LQ L++R+ V +D
Sbjct: 22 SVYNSSSAEAVPGSAAWLGRGLSCVCAQRRDSDANSTFDLTPAQEECLQSLQNRIDVAYD 81
Query: 67 PSRRDHQEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFA 126
+ HQEAL+ LW ++P++EL GLISEQWK+MGWQG+DPSTDFRG GFISLENLL+FA
Sbjct: 82 STIPLHQEALRELWKLSFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFA 141
Query: 127 KTFSASFQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLS 186
+ F SFQ LL+KQ G+R+ WEYPFAVAG+N+TFM++QMLDL++ KPRT V A F++ LS
Sbjct: 142 RNFQKSFQDLLRKQVGDRSVWEYPFAVAGINLTFMLIQMLDLEAVKPRTIVGATFLKFLS 201
Query: 187 EDEWAFDLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRIEDMPSY 246
E+E AFDLLYC+AF +MD+QWL ASYM+FN ++KSTR QLEREL+L+D+M +ED+PSY
Sbjct: 202 ENESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLERELMLEDIMHLEDLPSY 261
Query: 247 SLL 249
+LL
Sbjct: 262 ALL 264
>AT3G60260.1 | chr3:22274303-22276839 FORWARD LENGTH=267
Length = 266
Score = 312 bits (800), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 139/243 (57%), Positives = 187/243 (76%)
Query: 7 ALWSKIANEASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKVYFD 66
+++ + E GS W+G+ LSCVC++ + R +LTP QEE LQRL+ R+ V +D
Sbjct: 22 SVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFDLTPAQEECLQRLQSRIDVAYD 81
Query: 67 PSRRDHQEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFA 126
S HQEALK LW +P++EL G++S+QWK+MGWQG+DPSTDFRG GFISLENLL+FA
Sbjct: 82 SSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGKDPSTDFRGGGFISLENLLYFA 141
Query: 127 KTFSASFQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLS 186
+ F SF LL+KQ G+R+ WEYPFAVAG+NITFM++QMLDL++ KPR+ V F++ LS
Sbjct: 142 RKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQMLDLEAVKPRSIVGETFLRFLS 201
Query: 187 EDEWAFDLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRIEDMPSY 246
+E AFDLLYC+AF +MD+QWL ASYM+FN ++KSTR QLERE++++D+ +ED+PSY
Sbjct: 202 VNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLEREIMIEDITSLEDLPSY 261
Query: 247 SLL 249
SLL
Sbjct: 262 SLL 264
>AT1G03620.1 | chr1:904319-906013 REVERSE LENGTH=266
Length = 265
Score = 283 bits (724), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 179/233 (76%), Gaps = 4/233 (1%)
Query: 18 CGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKVYFDPSRRDHQEALK 77
G+ WIG + ++ A + L+P+QEERLQRL+ RM V FD +R DHQE+LK
Sbjct: 34 VGTRSWIGGLFTRSNRRQDKAVD---YTLSPLQEERLQRLQDRMVVPFDETRPDHQESLK 90
Query: 78 ALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSASFQRLL 137
ALW+ +P+ L GL++EQWK+MGWQG +PSTDFRG GFI+LENLLF A+T+ F+RLL
Sbjct: 91 ALWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYPVCFRRLL 150
Query: 138 KKQCGNRATWEYPFAVAGVNITFMIMQMLDLQST-KPRTFVRAVFIQMLSEDEWAFDLLY 196
KQ G+RA WEYPFAVAG+NI+FM++QMLDLQ+ KP+ F+++L EDE AFD+LY
Sbjct: 151 LKQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLLEEDERAFDVLY 210
Query: 197 CVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRIEDMPSYSLL 249
C+AF +MD QWL +ASYM+FNE+L++TR QLEREL LDD+ RI+D+P+Y+LL
Sbjct: 211 CIAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDLPAYNLL 263
>AT3G03610.1 | chr3:869479-871687 FORWARD LENGTH=324
Length = 323
Score = 281 bits (718), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/251 (55%), Positives = 179/251 (71%), Gaps = 2/251 (0%)
Query: 1 MVLGQL-ALWSKIANEASCGSPRWIGKSLSCVCIKRKGAYERICMN-LTPVQEERLQRLR 58
++ QL A W++ + GS +G+ LS + G R+ L+ +QEERL+ ++
Sbjct: 71 LIFSQLIAQWAQWIAKIVFGSGSLVGRFLSLPTFGQIGTGGRLLPPPLSMLQEERLRNIK 130
Query: 59 HRMKVYFDPSRRDHQEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFIS 118
R+++ FD SR +HQ+AL+ LW YP +EL L SE WK+MGWQG DPSTDFRG G+IS
Sbjct: 131 RRIEIPFDGSRMEHQDALRQLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYIS 190
Query: 119 LENLLFFAKTFSASFQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVR 178
LENL+FFAKT+ SFQRLL KQ G RA WEYPFAVAG+NI+FM+ QMLDLQS KP T
Sbjct: 191 LENLIFFAKTYPESFQRLLHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAG 250
Query: 179 AVFIQMLSEDEWAFDLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVM 238
F+ L EDE AFD LYC+AF +MD QWL + ASYM+FN++LKSTR QLEREL LDDV
Sbjct: 251 IRFLGFLEEDEMAFDNLYCIAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVS 310
Query: 239 RIEDMPSYSLL 249
I D+P+++LL
Sbjct: 311 SITDLPAFNLL 321
>AT3G43400.1 | chr3:15332136-15333703 FORWARD LENGTH=214
Length = 213
Score = 234 bits (596), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 139/179 (77%), Gaps = 13/179 (7%)
Query: 53 RLQRLRHRMKVYFDPSRRDHQEA---------LKALWHATYPDQELQGLISEQWKDMGWQ 103
L+ L + VY + D ++A +K +TY D++LQ LIS+QWK+MGWQ
Sbjct: 33 NLENLNMFLFVYTELINADAEDASCSSTPSWRIKKSLTSTYADEKLQDLISDQWKNMGWQ 92
Query: 104 GRDPSTDFRGAGFISLENLLFFAKTFSASFQRLLKKQCGNRATWEYPFAVAGVNITFMIM 163
+DPSTDFRG GFISLENL FFAKTFS RLLKKQ G RA WEYPFAVAGVNITFMIM
Sbjct: 93 RKDPSTDFRGDGFISLENLRFFAKTFS----RLLKKQGGKRAAWEYPFAVAGVNITFMIM 148
Query: 164 QMLDLQSTKPRTFVRAVFIQMLSEDEWAFDLLYCVAFVVMDKQWLDKNASYMDFNEILK 222
QMLDL+++KPR+F+R VF+QMLSE EWAF LLYCVAFVVMDKQWLDKNA+YM+FN++L+
Sbjct: 149 QMLDLEASKPRSFIRLVFLQMLSESEWAFGLLYCVAFVVMDKQWLDKNATYMEFNDVLR 207
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,530,345
Number of extensions: 219248
Number of successful extensions: 592
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 590
Number of HSP's successfully gapped: 6
Length of query: 250
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 154
Effective length of database: 8,474,633
Effective search space: 1305093482
Effective search space used: 1305093482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 110 (47.0 bits)