Os03g0322800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Engulfment and cell motility, ELM domain containing protein.
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Os03g0322800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Engulfment and cell motility, ELM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.8 | 0.234 | 10.4 | -0.972 | 0.263 | -0.813 | -0.872 | 0.978 | -0.0346 | 2.72 | 24.97 | 714 | -- | -- |
| 25.19 | 0.234 | 10.5 | -1.07 | 0.329 | -0.714 | -0.833 | -- | -0.0733 | 3.35 | 25.09 | 740 | -- | -- |
| 26.54 | 0.24 | 10.4 | -1.12 | 0.43 | -0.594 | -- | -0.0049 | -0.0794 | 4.54 | 25.21 | 906 | -- | -- |
| 26.53 | 0.24 | 10.4 | -1.12 | 0.429 | -0.594 | -- | -- | -0.0857 | 4.53 | 25.23 | 911 | -- | -- |
| 29.67 | 0.254 | 10.4 | -0.999 | -- | -0.844 | -- | 0.935 | -0.0597 | -- | 25.1 | 470 | -- | -- |
| 35.11 | 0.278 | 10.5 | -1.27 | 0.498 | -- | -0.183 | -- | -0.13 | 5.63 | -- | -- | -- | -- |
| 35.16 | 0.278 | 10.5 | -1.27 | 0.498 | -- | -- | -- | -0.129 | 5.8 | -- | -- | -- | -- |
| 30.39 | 0.257 | 10.4 | -1.13 | -- | -0.775 | -- | -- | -0.0509 | -- | 24.93 | 502 | -- | -- |
| 57.22 | 0.352 | 10.4 | -- | 0.491 | -0.832 | -- | -- | 0.13 | 4.18 | 23.6 | 988 | -- | -- |
| 48.03 | 0.324 | 10.5 | -1.25 | -- | -- | -- | -- | -0.117 | -- | -- | -- | -- | -- |
| 77.44 | 0.412 | 10.4 | -- | 0.479 | -- | -- | -- | 0.0121 | 5.93 | -- | -- | -- | -- |
| 60.77 | 0.363 | 10.4 | -- | -- | -1.14 | -- | -- | 0.177 | -- | 17.63 | 457 | -- | -- |
| 89.32 | 0.441 | 10.4 | -- | -- | -- | -- | -- | 0.0216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.73 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 16 | 24.24 | temperature | 20 | 720 | > th | dose dependent | sin | 23 | NA |
| 66 | 24.57 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 12 |
| 116 | 24.70 | temperature | 25 | 720 | > th | dose dependent | rect. | 8 | 20 |
| 157 | 24.78 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 181 | 24.81 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 196 | 24.82 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 198 | 24.84 | temperature | 25 | 90 | > th | dose independent | sin | 19 | NA |
| 200 | 24.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 241 | 24.96 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 262 | 25.04 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 324 | 25.20 | temperature | 25 | 720 | > th | dose independent | sin | 0 | NA |
| 356 | 25.29 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 21 |
| 360 | 25.30 | temperature | 30 | 720 | < th | dose independent | sin | 11 | NA |
| 369 | 25.33 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 11 |
| 379 | 25.34 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 9 |
| 429 | 25.44 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 13 |
| 445 | 25.47 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 18 |
| 451 | 25.48 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 15 |
| 521 | 25.61 | temperature | 30 | 720 | < th | dose independent | sin | 17 | NA |
| 524 | 25.61 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 16 |
| 529 | 25.62 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 6 |
| 530 | 25.62 | temperature | 30 | 720 | < th | dose independent | rect. | 6 | 16 |
| 684 | 25.86 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 21 |
| 805 | 26.06 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 16 |
| 838 | 26.14 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 881 | 26.20 | humidity | 70 | 720 | > th | dose independent | sin | 14 | NA |
| 919 | 26.24 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 13 |
| 934 | 26.26 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 7 |
| 949 | 26.28 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 16 |
| 981 | 26.32 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 14 |