Os12g0126200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Engulfment and cell motility, ELM domain containing protein.
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Os12g0126200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Engulfment and cell motility, ELM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.23 | 0.463 | 6.56 | -2.47 | 1.3 | 0.977 | -0.342 | -3.61 | -0.111 | 7.61 | 19.5 | 1982 | -- | -- |
| 103.75 | 0.474 | 6.46 | -1.73 | 1.21 | 1.14 | -0.127 | -- | 0.0652 | 7.73 | 1.281 | 6855 | -- | -- |
| 97.55 | 0.46 | 6.56 | -2.47 | 1.3 | 0.979 | -- | -3.57 | -0.108 | 7.61 | 19.63 | 1971 | -- | -- |
| 103.78 | 0.474 | 6.46 | -1.74 | 1.2 | 1.13 | -- | -- | 0.064 | 7.73 | -0.2333 | 6916 | -- | -- |
| 175.94 | 0.618 | 6.57 | -2.22 | -- | 0.939 | -- | -2.82 | -0.00849 | -- | 14.3 | 2868 | -- | -- |
| 125.3 | 0.525 | 6.4 | -1.17 | 1.2 | -- | -0.153 | -- | 0.351 | 7.53 | -- | -- | -- | -- |
| 125.36 | 0.524 | 6.4 | -1.17 | 1.2 | -- | -- | -- | 0.352 | 7.53 | -- | -- | -- | -- |
| 179.69 | 0.624 | 6.48 | -1.71 | -- | 1.16 | -- | -- | 0.118 | -- | 7.96 | 5747 | -- | -- |
| 157.51 | 0.585 | 6.38 | -- | 1.18 | 0.343 | -- | -- | 0.431 | 7.59 | 21.89 | 1234 | -- | -- |
| 202.4 | 0.665 | 6.43 | -1.15 | -- | -- | -- | -- | 0.37 | -- | -- | -- | -- | -- |
| 161.51 | 0.594 | 6.37 | -- | 1.19 | -- | -- | -- | 0.482 | 7.6 | -- | -- | -- | -- |
| 230.22 | 0.707 | 6.38 | -- | -- | 0.387 | -- | -- | 0.568 | -- | 33.6 | 1144 | -- | -- |
| 237.48 | 0.719 | 6.4 | -- | -- | -- | -- | -- | 0.498 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.46 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 93.56 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 3 | 94.07 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 5 | 94.42 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 12 | 94.76 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 24 | 94.87 | wind | 7 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 25 | 94.88 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 4 |
| 26 | 94.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 27 | 94.96 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 29 | 94.97 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 30 | 94.99 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 37 | 95.03 | wind | 7 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 39 | 95.06 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 42 | 95.07 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 53 | 95.15 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 81 | 95.44 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 14 |
| 86 | 95.46 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 89 | 95.49 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 92 | 95.50 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 16 |
| 94 | 95.51 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 17 |
| 96 | 95.52 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 102 | 95.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 104 | 95.54 | wind | 5 | 43200 | < th | dose independent | sin | 21 | NA |
| 111 | 95.55 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 13 |
| 135 | 95.60 | wind | 3 | 43200 | > th | dose dependent | sin | 21 | NA |
| 170 | 95.68 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 205 | 95.75 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 14 |
| 216 | 95.79 | wind | 5 | 43200 | > th | dose independent | sin | 20 | NA |
| 279 | 95.88 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 11 |
| 321 | 95.93 | wind | 9 | 43200 | < th | dose dependent | sin | 22 | NA |
| 340 | 95.96 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 369 | 96.01 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 370 | 96.01 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 438 | 96.09 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 441 | 96.10 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 14 |
| 576 | 96.27 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 609 | 96.31 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 737 | 96.51 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 753 | 96.52 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 760 | 96.53 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 777 | 96.55 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 812 | 96.59 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 813 | 96.59 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 872 | 96.68 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 919 | 96.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 983 | 96.85 | wind | 3 | 43200 | > th | dose dependent | rect. | 24 | 21 |