Os04g0545100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Engulfment and cell motility, ELM domain containing protein.
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Os04g0545100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Engulfment and cell motility, ELM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.26 | 0.71 | 7.6 | -5.44 | 2.31 | 1.39 | -1.03 | 4.96 | -1.07 | 0.959 | 24.19 | 661 | -- | -- |
| 248.09 | 0.734 | 7.5 | -4.65 | 1.99 | 1.38 | -1.71 | -- | -0.907 | 0.529 | 34.8 | 260 | -- | -- |
| 231.8 | 0.709 | 7.62 | -5.48 | 2.34 | 1.43 | -- | 5.48 | -1.07 | 0.964 | 24.1 | 768 | -- | -- |
| 260.96 | 0.752 | 7.5 | -4.54 | 2.03 | 1.39 | -- | -- | -0.879 | 0.5 | 41.02 | 298 | -- | -- |
| 496.99 | 1.04 | 7.43 | -4.51 | -- | 2.24 | -- | 1.51 | -0.638 | -- | 25.8 | 1670 | -- | -- |
| 270.32 | 0.771 | 7.54 | -4.89 | 2.21 | -- | -1.63 | -- | -1.09 | 1.09 | -- | -- | -- | -- |
| 281.38 | 0.786 | 7.54 | -4.84 | 2.22 | -- | -- | -- | -1.08 | 1.13 | -- | -- | -- | -- |
| 429.99 | 0.97 | 7.4 | -4.15 | -- | 3.28 | -- | -- | -0.593 | -- | 41.02 | 298 | -- | -- |
| 337.88 | 0.856 | 7.16 | -- | 2.3 | 3.81 | -- | -- | 0.594 | 1.12 | 43.29 | 47520 | -- | -- |
| 586.36 | 1.13 | 7.5 | -4.75 | -- | -- | -- | -- | -1.03 | -- | -- | -- | -- | -- |
| 897.85 | 1.4 | 7.42 | -- | 2.14 | -- | -- | -- | -0.538 | 1.04 | -- | -- | -- | -- |
| 662.81 | 1.2 | 7.14 | -- | -- | 3.66 | -- | -- | 0.591 | -- | 51.84 | 47520 | -- | -- |
| 1181.9 | 1.6 | 7.38 | -- | -- | -- | -- | -- | -0.506 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 221.56 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 4 | 223.03 | humidity | 60 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 7 | 224.29 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 9 | 224.44 | humidity | 60 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 16 | 225.53 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 3 |
| 18 | 225.81 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 27 | 226.14 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 29 | 226.28 | humidity | 80 | 90 | > th | dose dependent | rect. | 23 | 8 |
| 35 | 226.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 39 | 226.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 21 |
| 40 | 226.60 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 46 | 226.76 | humidity | 60 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 48 | 226.80 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 3 |
| 52 | 226.91 | wind | 7 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 55 | 227.06 | wind | 1 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 63 | 227.26 | humidity | 80 | 30 | > th | dose dependent | sin | 6 | NA |
| 73 | 227.54 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 74 | 227.54 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 76 | 227.61 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 81 | 227.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 85 | 227.79 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 86 | 227.82 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 88 | 227.84 | wind | 1 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 99 | 227.99 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 20 |
| 102 | 228.02 | humidity | 60 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 104 | 228.04 | humidity | 80 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 110 | 228.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 112 | 228.10 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 142 | 228.42 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 15 |
| 145 | 228.44 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 149 | 228.49 | wind | 1 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 150 | 228.49 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 158 | 228.56 | wind | 7 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 190 | 228.84 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 192 | 228.85 | temperature | 30 | 90 | < th | dose independent | rect. | 7 | 16 |
| 193 | 228.85 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 18 |
| 204 | 228.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 214 | 228.97 | temperature | 25 | 720 | < th | dose dependent | sin | 5 | NA |
| 224 | 229.00 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 237 | 229.10 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 258 | 229.25 | wind | 7 | 14400 | < th | dose independent | rect. | 23 | 11 |
| 262 | 229.27 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 286 | 229.35 | temperature | 30 | 1440 | > th | dose independent | sin | 8 | NA |
| 287 | 229.35 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 297 | 229.39 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 14 | 17 |
| 298 | 229.40 | wind | 1 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 338 | 229.61 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 341 | 229.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 342 | 229.63 | humidity | 70 | 10 | > th | dose dependent | rect. | 22 | 10 |
| 349 | 229.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 367 | 229.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 13 |
| 368 | 229.75 | temperature | 15 | 90 | > th | dose dependent | rect. | 11 | 19 |
| 398 | 229.88 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 428 | 230.02 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 434 | 230.06 | wind | 1 | 43200 | < th | dose dependent | sin | 10 | NA |
| 443 | 230.17 | wind | 1 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 456 | 230.23 | humidity | 50 | 270 | > th | dose independent | rect. | 6 | 14 |
| 463 | 230.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 9 |
| 471 | 230.32 | wind | 7 | 14400 | > th | dose independent | rect. | 23 | 11 |
| 499 | 230.49 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 506 | 230.54 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 513 | 230.56 | temperature | 30 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 514 | 230.56 | humidity | 80 | 90 | > th | dose dependent | rect. | 23 | 16 |
| 530 | 230.62 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 21 |
| 565 | 230.75 | wind | 1 | 43200 | < th | dose independent | sin | 11 | NA |
| 585 | 230.79 | temperature | 30 | 1440 | < th | dose independent | sin | 8 | NA |
| 590 | 230.82 | temperature | 30 | 1440 | > th | dose dependent | sin | 5 | NA |
| 603 | 230.89 | humidity | 60 | 270 | > th | dose dependent | rect. | 20 | 10 |
| 653 | 231.15 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 710 | 231.28 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 714 | 231.31 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 12 | 17 |
| 785 | 231.42 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 916 | 231.55 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 20 | 10 |
| 944 | 231.71 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 1000 | 231.89 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 2 |