BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0216400 Os11g0216400|Os11g0216400
(374 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0216400 Proteinase inhibitor, propeptide domain contai... 544 e-155
Os08g0139100 Similar to DAG protein, chloroplast precursor 165 6e-41
Os06g0116600 Proteinase inhibitor, propeptide domain contai... 122 3e-28
Os09g0509000 Conserved hypothetical protein 122 5e-28
Os09g0132600 Conserved hypothetical protein 120 1e-27
>Os11g0216400 Proteinase inhibitor, propeptide domain containing protein
Length = 374
Score = 544 bits (1401), Expect = e-155, Method: Compositional matrix adjust.
Identities = 279/332 (84%), Positives = 279/332 (84%)
Query: 43 HQVSRPWLPXXXXXXXXXXXXXXXXXXXXXXXVDEKISPDEILFEGCDYNHWLITMEFPD 102
HQVSRPWLP VDEKISPDEILFEGCDYNHWLITMEFPD
Sbjct: 43 HQVSRPWLPAAGFRSSAAASAAARGDDYGRRDVDEKISPDEILFEGCDYNHWLITMEFPD 102
Query: 103 PKPTREEMIETYLQTLAKVVGSYEEAKKRMYAFSTTTYVGFQAVMTEEMSEKFRGLPGVV 162
PKPTREEMIETYLQTLAKVVGSYEEAKKRMYAFSTTTYVGFQAVMTEEMSEKFRGLPGVV
Sbjct: 103 PKPTREEMIETYLQTLAKVVGSYEEAKKRMYAFSTTTYVGFQAVMTEEMSEKFRGLPGVV 162
Query: 163 FILPDSYLYPETKEYGGDKYENGVITPRPPPVHYSKPSRTDXXXXXXXXXXXXPPQGNYQ 222
FILPDSYLYPETKEYGGDKYENGVITPRPPPVHYSKPSRTD PPQGNYQ
Sbjct: 163 FILPDSYLYPETKEYGGDKYENGVITPRPPPVHYSKPSRTDRNRNYRGNYQNGPPQGNYQ 222
Query: 223 NSPPPYGSQQDGRGYAPRQNYADRPXXXXXXXXXXXXXXXXXXHANPAGQGQGYYNSQER 282
NSPPPYGSQQDGRGYAPRQNYADRP HANPAGQGQGYYNSQER
Sbjct: 223 NSPPPYGSQQDGRGYAPRQNYADRPGYSGTSGGYQSQTTQYQGHANPAGQGQGYYNSQER 282
Query: 283 RNFNQGQGGDFRPGGPSAPGTYGQPPAPGNYAQPHPPTYPGSNQGAPGVNPGYGGNNRQG 342
RNFNQGQGGDFRPGGPSAPGTYGQPPAPGNYAQPHPPTYPGSNQGAPGVNPGYGGNNRQG
Sbjct: 283 RNFNQGQGGDFRPGGPSAPGTYGQPPAPGNYAQPHPPTYPGSNQGAPGVNPGYGGNNRQG 342
Query: 343 PGPAYGGDNWQGGSNQYPSQSEGQQESWRGRQ 374
PGPAYGGDNWQGGSNQYPSQSEGQQESWRGRQ
Sbjct: 343 PGPAYGGDNWQGGSNQYPSQSEGQQESWRGRQ 374
>Os08g0139100 Similar to DAG protein, chloroplast precursor
Length = 229
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/122 (65%), Positives = 93/122 (76%), Gaps = 1/122 (0%)
Query: 82 DEILFEGCDYNHWLITMEFP-DPKPTREEMIETYLQTLAKVVGSYEEAKKRMYAFSTTTY 140
+ IL GCDYNHWLI MEFP DP PTRE+MI+TYL TLA V+GS EEAKK MYAFSTTTY
Sbjct: 74 ETILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTY 133
Query: 141 VGFQAVMTEEMSEKFRGLPGVVFILPDSYLYPETKEYGGDKYENGVITPRPPPVHYSKPS 200
GFQ + EE SEKF+GLPGV+++LPDSY+ + K+YGGDKY NG I P P + K
Sbjct: 134 TGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKER 193
Query: 201 RT 202
RT
Sbjct: 194 RT 195
>Os06g0116600 Proteinase inhibitor, propeptide domain containing protein
Length = 165
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Query: 85 LFEGCDYNHWLITMEFPDPK-PTREEMIETYLQTLAKVVGSYEEAKKRMYAFSTTTYVGF 143
LF GCDY HWLI M+ P + T+++MI+ Y+QTLAKV+GS EEAKK++Y S Y GF
Sbjct: 24 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGF 83
Query: 144 QAVMTEEMSEKFRGLPGVVFILPDSYLYPETKEYGGDKYENGVITPRPP 192
+ EE S K GLPGV+F+LPDSY+ PE K+YG + + NG I R P
Sbjct: 84 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSP 132
>Os09g0509000 Conserved hypothetical protein
Length = 396
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 82/119 (68%), Gaps = 5/119 (4%)
Query: 82 DEILFEGCDYNHWLITMEFP-----DPKPTREEMIETYLQTLAKVVGSYEEAKKRMYAFS 136
+ IL +GCD+ HWL+ +E P +P+PTR+E+I+ Y++TLA+VVGS EEA+ ++Y+ S
Sbjct: 77 ETILLDGCDFEHWLVVVEPPPGDPSNPEPTRDEIIDGYIKTLAQVVGSEEEARHKIYSVS 136
Query: 137 TTTYVGFQAVMTEEMSEKFRGLPGVVFILPDSYLYPETKEYGGDKYENGVITPRPPPVH 195
T Y F A+++EE+S K + LP V ++LPDSYL K+YGG+ + NG P P H
Sbjct: 137 TRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGEPFINGEAVPYDPKYH 195
>Os09g0132600 Conserved hypothetical protein
Length = 398
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 82/119 (68%), Gaps = 5/119 (4%)
Query: 82 DEILFEGCDYNHWLITMEFP-----DPKPTREEMIETYLQTLAKVVGSYEEAKKRMYAFS 136
+ IL +GCD+ HWL+ M+ P +P+PTR+E+I+ Y++TLA++VGS +EA+ ++Y+ S
Sbjct: 73 ETILLDGCDFEHWLVVMDPPPGDPSNPEPTRDEIIDGYIKTLAQIVGSEDEARHKIYSVS 132
Query: 137 TTTYVGFQAVMTEEMSEKFRGLPGVVFILPDSYLYPETKEYGGDKYENGVITPRPPPVH 195
T Y F A+++EE+S K + LP V ++LPDSYL K+YGG+ + NG P P H
Sbjct: 133 TRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGEPFINGEAVPYDPKYH 191
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.311 0.135 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,305,723
Number of extensions: 792475
Number of successful extensions: 3818
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 3820
Number of HSP's successfully gapped: 5
Length of query: 374
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 272
Effective length of database: 11,709,973
Effective search space: 3185112656
Effective search space used: 3185112656
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 157 (65.1 bits)