Os11g0216400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteinase inhibitor, propeptide domain containing protein.
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Os11g0216400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteinase inhibitor, propeptide domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.34 | 0.442 | 10.8 | 1.56 | 2.06 | -2.47 | 0.358 | -2.54 | 0.277 | 14.1 | 30.72 | 30 | 21 | -- |
| 97.3 | 0.459 | 10.8 | 1.39 | 2.16 | -2.35 | 0.127 | -- | 0.259 | 14 | 31.73 | 41 | 21.1 | -- |
| 88.73 | 0.439 | 10.8 | 1.56 | 2.05 | -2.48 | -- | -2.35 | 0.276 | 14.1 | 30.86 | 33 | 21.1 | -- |
| 96.97 | 0.459 | 10.8 | 1.35 | 2.09 | -2.43 | -- | -- | 0.237 | 13.8 | 31.97 | 58 | 21.5 | -- |
| 115.97 | 0.502 | 10.8 | 1.54 | -- | -3.31 | -- | -1.88 | 0.256 | -- | 35.72 | 132 | 2.86 | -- |
| 137.03 | 0.549 | 10.8 | 1.68 | 2.46 | -- | 1.04 | -- | 0.482 | 15.7 | -- | -- | -- | -- |
| 140.25 | 0.555 | 10.8 | 1.69 | 2.47 | -- | -- | -- | 0.488 | 15.7 | -- | -- | -- | -- |
| 120.73 | 0.512 | 10.8 | 1.45 | -- | -3.15 | -- | -- | 0.258 | -- | 39.51 | 120 | 2.88 | -- |
| 142.27 | 0.556 | 10.8 | -- | 1.98 | -2.93 | -- | -- | 0.0194 | 13.4 | 31.08 | 72 | 21.8 | -- |
| 476.76 | 1.02 | 10.7 | 1.59 | -- | -- | -- | -- | 0.422 | -- | -- | -- | -- | -- |
| 215.79 | 0.687 | 10.8 | -- | 2.43 | -- | -- | -- | 0.299 | 15.7 | -- | -- | -- | -- |
| 171.8 | 0.61 | 10.8 | -- | -- | -3.46 | -- | -- | -0.00694 | -- | 33.78 | 89 | 2.19 | -- |
| 543.47 | 1.09 | 10.8 | -- | -- | -- | -- | -- | 0.246 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.64 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 2 | 79.30 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 4 | 79.86 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 7 | 80.10 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 27 | 82.36 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 37 | 83.83 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 43 | 84.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 47 | 84.92 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 64 | 86.59 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 87 | 87.91 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 98 | 88.64 | temperature | 30.0 | 30 | < th | dose dependent | sin | 3 | NA |
| 129 | 90.03 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 156 | 91.04 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 176 | 91.74 | temperature | 10.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 187 | 92.16 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 194 | 92.43 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 214 | 92.97 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 257 | 94.14 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 264 | 94.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 304 | 94.93 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 311 | 94.98 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 322 | 95.16 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 363 | 95.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 376 | 95.97 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 389 | 96.11 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 390 | 96.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 391 | 96.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 408 | 96.38 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 430 | 96.65 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 442 | 96.79 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 453 | 96.90 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 463 | 96.99 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 475 | 97.13 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 489 | 97.32 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 491 | 97.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 493 | 97.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 494 | 97.32 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 497 | 97.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 498 | 97.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 499 | 97.32 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 522 | 97.50 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 526 | 97.60 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 575 | 98.06 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 582 | 98.17 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 589 | 98.23 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 601 | 98.36 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 624 | 98.58 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 629 | 98.66 | radiation | 1.0 | 270 | < th | dose independent | sin | 2 | NA |
| 644 | 98.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 646 | 98.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 655 | 98.81 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 679 | 98.89 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 770 | 99.42 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 841 | 99.73 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 19 |
| 843 | 99.73 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 867 | 99.89 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 916 | 100.19 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 19 |
| 984 | 100.63 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 991 | 100.68 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |