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Os06g0116600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Proteinase inhibitor, propeptide domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0282) R2 : 0.617
β1 : -- (--) R2dD : -- R2D : --
β2 : 2 (0.0736) R2dC : 0.619 R2C : 0.617
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.000248 (0.0593) R2dN8 : 1.9e-08 R2N8 : -0.00195
σ : 0.531
deviance : 128.89
__
_____
C
peak time of C : 17.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
99.23 0.468 12.5 -0.449 1.95 0.309 0.405 -7.81 -0.0347 17.5 32.6 1178 -- --
105.53 0.478 12.4 0.801 1.86 -0.456 0.707 -- -0.00571 17.3 32.99 5502 -- --
99.63 0.465 12.5 -0.449 1.95 0.306 -- -7.81 -0.0339 17.5 32.6 1178 -- --
101.59 0.469 12.4 0.803 1.97 -0.552 -- -- -0.0512 17.5 33.3 1172 -- --
296.61 0.802 12.5 -0.416 -- 0.156 -- -7.8 -0.0748 -- 33.1 1229 -- --
116.68 0.506 12.3 0.662 2 -- 0.532 -- 0.071 17.4 -- -- -- --
117.38 0.507 12.3 0.661 2.01 -- -- -- 0.0734 17.4 -- -- -- --
302.18 0.81 12.4 0.759 -- -0.721 -- -- -0.104 -- 33.5 1199 -- --
117.8 0.506 12.4 -- 1.95 -0.473 -- -- -0.0904 17.5 33.3 1172 -- --
327.32 0.845 12.3 0.593 -- -- -- -- 0.0238 -- -- -- -- --
128.89 0.531 12.4 -- 2 -- -- -- -0.000248 17.4 -- -- -- --
316.83 0.829 12.4 -- -- -0.601 -- -- -0.149 -- 33.2 1199 -- --
336.6 0.856 12.3 -- -- -- -- -- -0.042 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 88.47 wind 5.0 270 < th dose independent rect. 4 1
2 88.63 wind 5.0 30 < th dose independent rect. 4 5
3 88.85 wind 5.0 270 < th dose independent rect. 3 3
6 89.14 temperature 10.0 30 > th dose dependent rect. 4 5
9 89.22 wind 9.0 30 < th dose dependent rect. 4 5
11 89.34 temperature 10.0 270 > th dose dependent rect. 3 3
15 89.45 wind 5.0 270 < th dose independent rect. 2 5
17 89.68 wind 9.0 270 < th dose dependent rect. 4 1
18 89.69 wind 9.0 30 < th dose independent rect. 9 19
26 89.89 precipitation 0.1 30 < th dose independent rect. 4 5
27 89.89 precipitation 0.1 30 < th dose dependent rect. 4 5
31 89.97 temperature 10.0 30 > th dose independent rect. 4 5
33 89.97 temperature 30.0 30 < th dose independent rect. 4 5
34 89.97 humidity 50.0 30 > th dose independent rect. 4 5
36 89.97 atmosphere 995.0 30 > th dose independent rect. 4 5
37 89.97 atmosphere 1015.0 30 < th dose independent rect. 4 5
38 89.97 temperature 10.0 30 > th dose independent rect. 9 19
39 90.03 precipitation 0.1 270 < th dose independent rect. 3 2
40 90.03 precipitation 0.1 270 < th dose dependent rect. 3 2
55 90.25 wind 9.0 270 < th dose dependent rect. 3 3
59 90.32 radiation 30.0 90 < th dose independent rect. 3 6
67 90.44 temperature 10.0 90 > th dose dependent rect. 8 7
72 90.65 radiation 1.0 270 < th dose dependent rect. 4 1
74 90.66 wind 9.0 270 < th dose independent rect. 5 23
76 90.71 atmosphere 995.0 30 > th dose independent rect. 9 19
83 90.79 precipitation 0.1 30 < th dose independent rect. 9 19
84 90.79 precipitation 0.1 30 < th dose dependent rect. 9 19
99 91.00 temperature 10.0 270 > th dose independent rect. 4 1
101 91.00 temperature 30.0 270 < th dose independent rect. 4 1
102 91.00 humidity 50.0 270 > th dose independent rect. 4 1
105 91.00 atmosphere 995.0 270 > th dose independent rect. 4 1
106 91.00 atmosphere 1010.0 270 < th dose independent rect. 4 1
108 91.00 radiation 20.0 270 < th dose independent rect. 4 1
112 91.00 temperature 10.0 270 > th dose independent rect. 5 23
114 91.01 temperature 10.0 10 > th dose dependent rect. 9 6
115 91.02 radiation 40.0 270 < th dose dependent rect. 4 1
124 91.14 radiation 1.0 270 < th dose independent rect. 4 1
194 91.57 humidity 50.0 270 > th dose dependent rect. 4 1
216 91.78 atmosphere 1000.0 10 > th dose dependent rect. 4 5
261 92.25 temperature 15.0 90 > th dose independent rect. 8 7
262 92.25 radiation 40.0 270 < th dose dependent rect. 2 5
264 92.26 humidity 50.0 270 > th dose independent rect. 7 19
265 92.26 humidity 50.0 270 > th dose independent rect. 6 21
275 92.33 atmosphere 1000.0 270 > th dose dependent rect. 4 1
279 92.39 temperature 10.0 270 > th dose dependent rect. 9 1
284 92.44 atmosphere 1000.0 30 > th dose independent rect. 20 8
307 92.71 precipitation 0.1 270 < th dose independent rect. 6 21
308 92.71 precipitation 0.1 270 < th dose dependent rect. 6 21
319 92.74 precipitation 0.1 90 < th dose independent rect. 8 7
320 92.74 precipitation 0.1 90 < th dose dependent rect. 8 7
337 92.87 humidity 50.0 30 > th dose independent rect. 9 19
340 92.90 wind 9.0 90 < th dose independent rect. 8 7
348 92.97 atmosphere 1000.0 270 > th dose independent rect. 19 7
366 93.03 atmosphere 1015.0 90 < th dose independent rect. 8 7
367 93.03 temperature 10.0 90 > th dose independent rect. 15 17
370 93.05 humidity 90.0 90 < th dose independent rect. 8 7
388 93.12 atmosphere 995.0 90 > th dose independent rect. 8 7
389 93.13 temperature 10.0 10 > th dose dependent rect. 15 18
390 93.15 radiation 40.0 90 < th dose independent rect. 4 15
394 93.17 temperature 10.0 90 > th dose dependent rect. 15 17
412 93.25 temperature 20.0 10 > th dose independent rect. 9 6
417 93.27 humidity 50.0 270 > th dose dependent rect. 2 5
420 93.29 radiation 1.0 270 < th dose independent rect. 18 9
428 93.34 atmosphere 1005.0 30 > th dose independent rect. 4 5
445 93.41 radiation 40.0 90 < th dose independent rect. 15 17
450 93.43 temperature 15.0 270 > th dose independent rect. 6 8
454 93.46 precipitation 0.1 90 < th dose independent rect. 15 17
455 93.46 radiation 1.0 270 < th dose dependent rect. 18 9
456 93.46 precipitation 0.1 90 < th dose dependent rect. 15 17
460 93.48 humidity 60.0 270 > th dose independent rect. 18 9
468 93.51 radiation 1.0 90 > th dose independent rect. 8 7
471 93.52 precipitation 0.1 270 < th dose independent rect. 3 15
474 93.52 precipitation 0.1 270 < th dose dependent rect. 3 15
476 93.53 temperature 30.0 270 < th dose independent rect. 18 9
481 93.56 wind 9.0 90 < th dose independent rect. 15 17
482 93.56 temperature 10.0 270 > th dose dependent rect. 8 3
496 93.63 radiation 40.0 10 < th dose independent rect. 4 16
500 93.66 atmosphere 995.0 270 > th dose independent rect. 6 21
513 93.73 atmosphere 1005.0 270 > th dose independent rect. 4 1
528 93.78 humidity 50.0 30 > th dose dependent rect. 4 5
545 93.85 precipitation 0.1 10 < th dose independent rect. 15 18
547 93.85 precipitation 0.1 10 < th dose dependent rect. 15 18
549 93.86 wind 1.0 90 > th dose independent rect. 8 7
559 93.88 wind 9.0 270 < th dose independent rect. 6 8
563 93.91 radiation 1.0 10 > th dose independent rect. 9 6
566 93.92 wind 9.0 270 < th dose independent rect. 18 9
573 93.95 precipitation 0.1 270 < th dose independent rect. 6 8
575 93.95 precipitation 0.1 270 < th dose dependent rect. 6 8
576 93.96 temperature 10.0 270 > th dose independent rect. 18 9
581 93.96 temperature 10.0 270 > th dose independent rect. 3 15
582 93.96 atmosphere 1015.0 270 < th dose independent rect. 3 15
583 93.96 atmosphere 995.0 30 > th dose dependent rect. 20 8
587 94.00 wind 9.0 10 < th dose independent rect. 9 6
590 94.00 radiation 1.0 270 < th dose dependent rect. 3 8
591 94.01 temperature 10.0 10 > th dose independent rect. 9 6
593 94.01 atmosphere 995.0 10 > th dose independent rect. 9 6
594 94.01 atmosphere 1015.0 10 < th dose independent rect. 9 6
595 94.01 precipitation 0.1 10 < th dose independent rect. 9 6
596 94.01 temperature 10.0 10 > th dose independent rect. 15 18
597 94.01 precipitation 0.1 10 < th dose dependent rect. 9 6
604 94.04 humidity 90.0 10 < th dose independent rect. 9 6
616 94.08 atmosphere 1015.0 90 < th dose independent rect. 15 17
663 94.24 atmosphere 995.0 270 > th dose independent rect. 6 8
665 94.24 atmosphere 1015.0 270 < th dose independent rect. 6 8
696 94.27 radiation 30.0 90 < th dose independent rect. 3 8
719 94.30 wind 9.0 270 < th dose dependent rect. 7 6
726 94.34 atmosphere 1005.0 270 > th dose independent rect. 3 3
750 94.40 temperature 10.0 1440 > th dose independent rect. 10 6
754 94.40 temperature 10.0 1440 > th dose independent rect. 16 18
762 94.43 temperature 10.0 1440 > th dose independent rect. 5 5
765 94.43 atmosphere 995.0 1440 > th dose independent rect. 5 5
766 94.43 atmosphere 1015.0 1440 < th dose independent rect. 5 5
768 94.43 temperature 10.0 1440 > th dose independent rect. 10 19
781 94.46 atmosphere 1015.0 10 < th dose independent rect. 15 18
797 94.55 wind 9.0 10 < th dose independent rect. 15 18
823 94.61 humidity 50.0 270 > th dose dependent rect. 18 8
827 94.64 atmosphere 995.0 90 > th dose independent rect. 15 17
843 94.68 humidity 50.0 270 > th dose independent rect. 7 7
847 94.70 atmosphere 1015.0 30 < th dose independent rect. 9 19
850 94.73 radiation 1.0 270 < th dose independent rect. 3 8
860 94.78 atmosphere 1015.0 270 < th dose dependent rect. 3 2
871 94.81 atmosphere 1015.0 30 < th dose dependent rect. 4 5
895 94.87 radiation 40.0 10 < th dose independent rect. 15 18
911 94.90 radiation 40.0 90 < th dose dependent rect. 4 15
950 95.06 wind 9.0 270 < th dose independent rect. 3 15
953 95.07 atmosphere 1005.0 270 > th dose independent rect. 2 5
973 95.09 precipitation 0.1 270 < th dose independent rect. 18 8
977 95.09 precipitation 0.1 270 < th dose dependent rect. 18 8
994 95.18 temperature 15.0 270 > th dose independent rect. 9 1
996 95.18 radiation 1.0 270 > th dose independent rect. 9 1