BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0564600 Os10g0564600|J065123F15
(84 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0564600 Similar to Calcineurin B (Fragment) 170 2e-43
Os12g0597000 Similar to Calcineurin B-like protein 2 (SOS3-... 100 3e-22
Os03g0626800 Calcineurin B protein 99 7e-22
Os05g0534400 Similar to Calcineurin B-like protein 4 (SALT ... 96 6e-21
Os12g0162400 Similar to Calcineurin B-like protein 3 (SOS3-... 94 2e-20
Os01g0598200 Similar to Calcineurin B-like protein 8 78 1e-15
Os02g0291400 76 5e-15
Os01g0711500 Similar to Calcineurin B (Fragment) 70 5e-13
Os02g0479400 65 1e-11
>Os10g0564600 Similar to Calcineurin B (Fragment)
Length = 84
Score = 170 bits (431), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/84 (100%), Positives = 84/84 (100%)
Query: 1 MGCFQSTARRPRPGYEDPVGLASETAFSVSEVEALFELFKSISGSVIDDGLINKEEFQLA 60
MGCFQSTARRPRPGYEDPVGLASETAFSVSEVEALFELFKSISGSVIDDGLINKEEFQLA
Sbjct: 1 MGCFQSTARRPRPGYEDPVGLASETAFSVSEVEALFELFKSISGSVIDDGLINKEEFQLA 60
Query: 61 LFKNKRKENLFANRVSISLSTILT 84
LFKNKRKENLFANRVSISLSTILT
Sbjct: 61 LFKNKRKENLFANRVSISLSTILT 84
>Os12g0597000 Similar to Calcineurin B-like protein 2 (SOS3-like calcium
binding protein 1)
Length = 225
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 3 CFQSTARRPRPGYEDPVGLASETAFSVSEVEALFELFKSISGSVIDDGLINKEEFQLALF 62
C ++PR G EDP LA ET FSVSEVEAL+ELFK IS +VIDDGLINKEEFQLALF
Sbjct: 18 CCDLELKQPR-GLEDPQVLARETVFSVSEVEALYELFKKISSAVIDDGLINKEEFQLALF 76
Query: 63 KNKRKENLFANRV 75
K +KE+LFA+RV
Sbjct: 77 KTSKKESLFADRV 89
>Os03g0626800 Calcineurin B protein
Length = 225
Score = 99.0 bits (245), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 1 MGCFQSTARRPRPGYEDPVGLASETAFSVSEVEALFELFKSISGSVIDDGLINKEEFQLA 60
+ C ++P+ G EDP LA ET FSVSEVEAL+ELFK IS +VIDDGLINKEEFQLA
Sbjct: 16 LKCCDLDLKQPK-GLEDPEILARETVFSVSEVEALYELFKKISSAVIDDGLINKEEFQLA 74
Query: 61 LFKNKRKENLFANRV 75
LFK +KE+LFA+RV
Sbjct: 75 LFKTNKKESLFADRV 89
>Os05g0534400 Similar to Calcineurin B-like protein 4 (SALT OVERLY SENSITIVE 3
protein)
Length = 210
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 58/75 (77%)
Query: 1 MGCFQSTARRPRPGYEDPVGLASETAFSVSEVEALFELFKSISGSVIDDGLINKEEFQLA 60
MGC S + PGYE+P LA++T F+V+EVEAL EL+ +S S+I DGLI+KEEFQLA
Sbjct: 1 MGCASSKQFKRPPGYEEPAVLAAQTTFTVNEVEALRELYNKMSYSIIKDGLIHKEEFQLA 60
Query: 61 LFKNKRKENLFANRV 75
LF+N RK NLFA+RV
Sbjct: 61 LFRNSRKANLFADRV 75
>Os12g0162400 Similar to Calcineurin B-like protein 3 (SOS3-like calcium
binding protein 6)
Length = 226
Score = 94.0 bits (232), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 3 CFQSTARRPRPGYEDPVGLASETAFSVSEVEALFELFKSISGSVIDDGLINKEEFQLALF 62
C ++ RP G +DP LA ET F+V+E+EAL+ELFK IS +V+DDGLINKEEFQLALF
Sbjct: 19 CSLDSSNRPN-GLQDPERLARETVFNVNEIEALYELFKKISSAVVDDGLINKEEFQLALF 77
Query: 63 KNKRKENLFANRV 75
K RK+++FA+RV
Sbjct: 78 KTNRKDSMFADRV 90
>Os01g0598200 Similar to Calcineurin B-like protein 8
Length = 218
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 12/82 (14%)
Query: 1 MGCF-------QSTARRPRPGYEDPVGLASETAFSVSEVEALFELFKSISGSVIDDGLIN 53
MGC + + PR + V LA+ET+F+V+EVEAL++LF+ +S S+I DGLI+
Sbjct: 2 MGCLPTKQVGRSTHSLNPR----EAVALAAETSFTVNEVEALYDLFRKLSNSIIKDGLIH 57
Query: 54 KEEFQLALFKNKRKENLFANRV 75
KEEF LALF+NK K NLF +RV
Sbjct: 58 KEEFHLALFRNK-KTNLFVDRV 78
>Os02g0291400
Length = 246
Score = 76.3 bits (186), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%)
Query: 27 FSVSEVEALFELFKSISGSVIDDGLINKEEFQLALFKNKRKENLFANR 74
FSVSEVEALFELFK IS S+ DGLI+KEEFQLALF+N K+NLFANR
Sbjct: 39 FSVSEVEALFELFKKISHSIFRDGLIHKEEFQLALFRNSNKKNLFANR 86
>Os01g0711500 Similar to Calcineurin B (Fragment)
Length = 249
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 20 GLASET-AFSVSEVEALFELFKSISGSVIDDGLINKEEFQLALFKNKRKENLFANRV 75
LA E+ FSV+EVEAL+EL+K IS S++DDGLI+KEE QLALF+ +NLF +RV
Sbjct: 75 DLADESRCFSVNEVEALYELYKKISCSIVDDGLIHKEELQLALFRTPAGKNLFLDRV 131
>Os02g0479400
Length = 85
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 1 MGCFQSTARRPRPGYEDPVGLASETAFSVSEVEALFELFKSISGSVIDDGLINKEEFQLA 60
M C G +P LA++T ++V+E+EAL+ELFK I G+VI+DG IN EEF L
Sbjct: 6 MSCCNPIPNVTNDGAGNPEALAAQTIYTVNEIEALYELFKRIDGAVIEDGKINMEEFNLR 65
Query: 61 LFKNKRKENLFANRVSISLS 80
+F ++ R SI L+
Sbjct: 66 VFGPEKGGTCLLIRYSIYLT 85
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,325,810
Number of extensions: 68619
Number of successful extensions: 210
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 210
Number of HSP's successfully gapped: 9
Length of query: 84
Length of database: 17,035,801
Length adjustment: 54
Effective length of query: 30
Effective length of database: 14,216,245
Effective search space: 426487350
Effective search space used: 426487350
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 149 (62.0 bits)