BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0554100 Os10g0554100|AK071048
(326 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0554100 Oxysterol-binding protein family protein 689 0.0
Os08g0154900 Oxysterol-binding protein family protein 513 e-146
Os03g0704700 Oxysterol-binding protein family protein 491 e-139
Os12g0285600 Oxysterol-binding protein family protein 472 e-133
Os03g0274000 Oxysterol-binding protein family protein 149 3e-36
AK110479 123 2e-28
>Os10g0554100 Oxysterol-binding protein family protein
Length = 326
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/326 (100%), Positives = 326/326 (100%)
Query: 1 MRILYVAAFAVSGYASTDSRPCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPMVMACHC 60
MRILYVAAFAVSGYASTDSRPCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPMVMACHC
Sbjct: 1 MRILYVAAFAVSGYASTDSRPCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPMVMACHC 60
Query: 61 EGKGWKFWGDSNLKSKFWGQSIQLDPSGVLTLQFDDGETFQWSKVTTTINNLIIGRVYCH 120
EGKGWKFWGDSNLKSKFWGQSIQLDPSGVLTLQFDDGETFQWSKVTTTINNLIIGRVYCH
Sbjct: 61 EGKGWKFWGDSNLKSKFWGQSIQLDPSGVLTLQFDDGETFQWSKVTTTINNLIIGRVYCH 120
Query: 121 HHGTMNISGNRQYSCKLTFKEQSFLDRNPRQVQGLVTDANGTKVAFLMGKWDESMSCIIG 180
HHGTMNISGNRQYSCKLTFKEQSFLDRNPRQVQGLVTDANGTKVAFLMGKWDESMSCIIG
Sbjct: 121 HHGTMNISGNRQYSCKLTFKEQSFLDRNPRQVQGLVTDANGTKVAFLMGKWDESMSCIIG 180
Query: 181 DDASKVNSRNANQSTGATLLWEKNVPPANPTRYNLSSFAITLNELTPGLKEKLPPTDSRL 240
DDASKVNSRNANQSTGATLLWEKNVPPANPTRYNLSSFAITLNELTPGLKEKLPPTDSRL
Sbjct: 181 DDASKVNSRNANQSTGATLLWEKNVPPANPTRYNLSSFAITLNELTPGLKEKLPPTDSRL 240
Query: 241 RPDQRHLENGEYEKANSEKLRLETRQRMARKMQESGWKPRWFQRDTEDGTFRYVGGYWEA 300
RPDQRHLENGEYEKANSEKLRLETRQRMARKMQESGWKPRWFQRDTEDGTFRYVGGYWEA
Sbjct: 241 RPDQRHLENGEYEKANSEKLRLETRQRMARKMQESGWKPRWFQRDTEDGTFRYVGGYWEA 300
Query: 301 REQRKWVGCNDIFGNNVSTLCTSASI 326
REQRKWVGCNDIFGNNVSTLCTSASI
Sbjct: 301 REQRKWVGCNDIFGNNVSTLCTSASI 326
>Os08g0154900 Oxysterol-binding protein family protein
Length = 728
Score = 513 bits (1322), Expect = e-146, Method: Compositional matrix adjust.
Identities = 238/314 (75%), Positives = 271/314 (86%), Gaps = 3/314 (0%)
Query: 1 MRILYVAAFAVSGYASTDSRPCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPMVMACHC 60
MRIL VAAFAVSGYAS+ +RPCKPFNPLLGETYEAD+PE+G+RFF+EKVSHHPM++ACHC
Sbjct: 413 MRILKVAAFAVSGYASSVARPCKPFNPLLGETYEADFPERGVRFFAEKVSHHPMLIACHC 472
Query: 61 EGKGWKFWGDSNLKSKFWGQSIQLDPSGVLTLQFDDGETFQWSKVTTTINNLIIGRVYCH 120
EGKGWKFWGDSNLKSKFWGQSIQ+DP GVLT++FDDGE FQWSKVTTTI+NLI+G++YC
Sbjct: 473 EGKGWKFWGDSNLKSKFWGQSIQVDPIGVLTVEFDDGEIFQWSKVTTTIHNLILGKLYCS 532
Query: 121 HHGTMNISGNRQYSCKLTFKEQSFLDRNPRQVQGLVTDANGTKVAFLMGKWDESMSCIIG 180
HHGTM+I GNRQYSCKL FKE S LDRNP VQG V D +G K +FL+GKWDE+M
Sbjct: 533 HHGTMHIKGNRQYSCKLKFKEPSLLDRNPHLVQGFVEDDDGNKPSFLIGKWDENMY-YSN 591
Query: 181 DDASKVNSRNANQSTGATLLWEKNVPPANPTRYNLSSFAITLNELTPGLKEKLPPTDSRL 240
D SKV S +Q GA LLWEKN P NPTRYNLSSFAITLNEL+P L++KLPPTDSRL
Sbjct: 592 LDTSKVKS--VDQLKGAVLLWEKNKPSPNPTRYNLSSFAITLNELSPDLQDKLPPTDSRL 649
Query: 241 RPDQRHLENGEYEKANSEKLRLETRQRMARKMQESGWKPRWFQRDTEDGTFRYVGGYWEA 300
RPDQRHLENGEYEKAN+EKLRLE RQRM+ K+Q++GWKPRWFQ+D EDGT+R+ GGYWEA
Sbjct: 650 RPDQRHLENGEYEKANAEKLRLERRQRMSSKLQDNGWKPRWFQKDGEDGTYRFKGGYWEA 709
Query: 301 REQRKWVGCNDIFG 314
RE +W C DIFG
Sbjct: 710 REHGQWDDCLDIFG 723
>Os03g0704700 Oxysterol-binding protein family protein
Length = 412
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 230/315 (73%), Positives = 261/315 (82%), Gaps = 2/315 (0%)
Query: 1 MRILYVAAFAVSGYASTDSRPCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPMVMACHC 60
MRIL VAAFAVSGYASTD R CKPFNPLLGETYEADYP+KG+RFFSEKVSHHPMV+ACHC
Sbjct: 91 MRILSVAAFAVSGYASTDGRSCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHC 150
Query: 61 EGKGWKFWGDSNLKSKFWGQSIQLDPSGVLTLQFDDGETFQWSKVTTTINNLIIGRVYCH 120
EG GW+FW DSNLKSKFWG+SIQLDP GVLTL+FDDGE FQWSKVTT+I NLI+G++YC
Sbjct: 151 EGTGWRFWADSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFQWSKVTTSIYNLILGKLYCD 210
Query: 121 HHGTMNISGNRQYSCKLTFKEQSFLDRNPRQVQGLVTDANGTKVAFLMGKWDESMSCIIG 180
H+GTM I GN +YSCKL FKEQS +DRNP QVQG+V D +G VA L GKWDESM ++G
Sbjct: 211 HYGTMRIQGNNEYSCKLKFKEQSIIDRNPHQVQGVVQDRSGRTVATLFGKWDESMHYVMG 270
Query: 181 DDASKVNSRNANQSTGATLLWEKNVPPANPTRYNLSSFAITLNELTPGLKEKLPPTDSRL 240
D K + + + A LLW+++ PP PTRYN + FAITLNELT GLKEKLPPTDSRL
Sbjct: 271 DCFGK--GKGSENFSEAHLLWKRSKPPKFPTRYNFTRFAITLNELTAGLKEKLPPTDSRL 328
Query: 241 RPDQRHLENGEYEKANSEKLRLETRQRMARKMQESGWKPRWFQRDTEDGTFRYVGGYWEA 300
RPDQR LENGEYE+AN+EKLRLE RQR ARKMQESGWKPRWF +D T+RY+GGYWE+
Sbjct: 329 RPDQRCLENGEYERANAEKLRLEQRQRQARKMQESGWKPRWFAKDKATDTYRYLGGYWES 388
Query: 301 REQRKWVGCNDIFGN 315
RE+ W GC DIFG
Sbjct: 389 REKGSWEGCPDIFGQ 403
>Os12g0285600 Oxysterol-binding protein family protein
Length = 756
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 222/320 (69%), Positives = 261/320 (81%), Gaps = 5/320 (1%)
Query: 1 MRILYVAAFAVSGYASTDSRPCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPMVMACHC 60
MR L+VAAFAVSGYAST+ R CKPFNPLLGETYEADYP+KG+RFFSEKVSHHPMV+ACHC
Sbjct: 437 MRTLHVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHC 496
Query: 61 EGKGWKFWGDSNLKSKFWGQSIQLDPSGVLTLQFDDGETFQWSKVTTTINNLIIGRVYCH 120
EG+GWKFWGDSNLK KFWG+SIQLDP GVLTLQFDDGETFQWSKVTT+I N+IIG++YC
Sbjct: 497 EGRGWKFWGDSNLKGKFWGRSIQLDPIGVLTLQFDDGETFQWSKVTTSIYNIIIGKIYCD 556
Query: 121 HHGTMNISGNRQYSCKLTFKEQSFLDRNPRQVQGLVTD-ANGTKVAFLMGKWDESMSCII 179
H+GTM I G+ YSCKL FKEQS +DRNP QV G V D G KVA L+GKWDE+M ++
Sbjct: 557 HYGTMRIKGSGDYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGQKVAMLIGKWDEAMYYVL 616
Query: 180 GDDASKVNSRNANQSTGATLLWEKNVPPANPTRYNLSSFAITLNELTPGLKEKLPPTDSR 239
GD ++K + + + A LLWE++ N TRYNLS FAI+LNELT L +KLPPTDSR
Sbjct: 617 GDPSAK--PKGYDPMSEAVLLWERD-KSLNQTRYNLSPFAISLNELTANLAKKLPPTDSR 673
Query: 240 LRPDQRHLENGEYEKANSEKLRLETRQRMARKMQESGWKPRWFQRDTEDGTFRYVGGYWE 299
LRPDQRHLENGEYE AN+EKLRLE QR AR++QE GW+PRWF +D +D ++RY+GGYWE
Sbjct: 674 LRPDQRHLENGEYEMANAEKLRLEQLQRQARRLQEKGWQPRWFSKDDDD-SYRYIGGYWE 732
Query: 300 AREQRKWVGCNDIFGNNVST 319
ARE+ W G DIFG ++
Sbjct: 733 AREKGNWDGIPDIFGQRSAS 752
>Os03g0274000 Oxysterol-binding protein family protein
Length = 463
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 156/319 (48%), Gaps = 32/319 (10%)
Query: 1 MRILYVAAFAVSGYASTDSRPCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPMVMACHC 60
MR+ Y +A+AVS Y + R KPFNP+LGETYE +GI F +E+VSHHP + A HC
Sbjct: 128 MRMAYASAWAVSVYFAY-QRTWKPFNPILGETYEM-VNHQGISFIAEQVSHHPPMGAAHC 185
Query: 61 EGKGWKFWGDSNLKSKFWGQSIQLDPSGVLTLQF-DDGETFQWSKVTTTINNLIIGRVYC 119
E + + S LK+KF G S+++ P G + G + T +NNLI GR +
Sbjct: 186 ENAHFTYDITSKLKTKFLGNSLEVYPLGRTRVSLKKSGVKLELVPPLTKVNNLIFGRTWV 245
Query: 120 HHHGTMNI----SGNRQYSCKLTFKEQSFLDRNPRQVQGLVTDANGTKVAFLMGKWDESM 175
G M + +G++ L F+ + +V G V A + GKW++SM
Sbjct: 246 DSPGEMVLTNLTTGDK---VVLLFQPCGWFGAGRYEVDGYVYSAAEEPKIMITGKWNQSM 302
Query: 176 SCIIGDDASKVNSRNANQSTGATL--LWEKNVPPANPTRYNLSSFAITLNELTPGLKEKL 233
SC D + + G L +W P N +Y + FA +N K KL
Sbjct: 303 SCQPCD-------QEGDPLPGTELKEIWRVAPTPPN-DKYQYTHFAHKINSFDTAPK-KL 353
Query: 234 PPTDSRLRPDQRHLENGEYEKANSEKLRLETRQRMARKMQESG---WKPRWFQRDTEDG- 289
+DSRLRPD+ LE G+ K+ SEK RLE +QR ++ +E+ + PRWF R E
Sbjct: 354 LASDSRLRPDRYALEKGDMSKSGSEKSRLEEQQRAEKRTREAKGEQFTPRWFNRTDEIAP 413
Query: 290 -------TFRYVGGYWEAR 301
+ Y G Y E R
Sbjct: 414 TPWGELEVYEYNGKYTEHR 432
>AK110479
Length = 475
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 138/290 (47%), Gaps = 19/290 (6%)
Query: 2 RILYVAAFAVSGYASTDSRPCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPMVMACHCE 61
R+ VAAF VS + + + R KPFNPLLGET+E + G+RF +E+V H P V A H E
Sbjct: 138 RLALVAAFLVSPFGAAE-RTWKPFNPLLGETFEMEGVGNGVRFLAEQVCHSPPVSAAHAE 196
Query: 62 GKGWKFWGDSNLKSKFWGQSIQLDPSGVLTLQF-DDGETFQWSKVTTTINNLIIGRVYCH 120
+ + S +KF G S+++ P G + GE F ++NL++GR +
Sbjct: 197 NDHFTYDIVSAPATKFQGNSLEVYPKGRTRISLRHTGEVFSHVPPQAKVHNLVLGRTWID 256
Query: 121 HHGTMNISGNRQYS-CKLTFKEQSFLDRNPRQVQGLVTDANGTKVAFLMGKWDESMS-CI 178
+GT ++ + L FK + + +G V A G + GKW+ + C
Sbjct: 257 SYGTFLVTNTKTGDKVVLEFKPCGWFGAGQYEFEGHVLVAEGNARLAMSGKWNSYVDVCA 316
Query: 179 IGDDASKVNSRNANQSTGATL--LWEKNVPPANPTRYNLSSFAITLNELTPGLKEKLPPT 236
D S++ GA L LW PA +Y + FA LN T L +
Sbjct: 317 CNPDGSEIE--------GAELRRLWTCAEKPAE-DQYGCTHFAWDLNN-TKHLSRPPMAS 366
Query: 237 DSRLRPDQRHLENGEYEKANSEKLRLETRQRMARKMQE---SGWKPRWFQ 283
DSR R D+ L+ E +A + K +LE QR RK++E W+ RWF+
Sbjct: 367 DSRRRADRHALQEREMVQAAAAKQQLEEDQRQERKLREERGEQWQARWFE 416
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,044,954
Number of extensions: 510807
Number of successful extensions: 1181
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1168
Number of HSP's successfully gapped: 6
Length of query: 326
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 225
Effective length of database: 11,762,187
Effective search space: 2646492075
Effective search space used: 2646492075
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)